RNA–Protein interactions for RNA: ENST00000484050.1

LYSMD4-207, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-207ENST00000484050 PRG4Q92954 1404 aaPredicted RBP43.05■■■■■ 4.48
LYSMD4-207ENST00000484050 JPH4Q96JJ6 628 aa43.04■■■■■ 4.48
LYSMD4-207ENST00000484050 KIAA0586Q9BVV6 1533 aa42.91■■■■■ 4.46
LYSMD4-207ENST00000484050 CARMIL1Q5VZK9 1371 aa42.9■■■■■ 4.46
LYSMD4-207ENST00000484050 IQGAP2Q13576 1575 aa42.6■■■■■ 4.41
LYSMD4-207ENST00000484050 RAPGEF2Q9Y4G8 1499 aa42.58■■■■■ 4.41
LYSMD4-207ENST00000484050 ADCY10Q96PN6 1610 aa42.56■■■■■ 4.4
LYSMD4-207ENST00000484050 KIF13AQ9H1H9 1805 aa42.49■■■■■ 4.39
LYSMD4-207ENST00000484050 CARMIL2Q6F5E8 1435 aa42.45■■■■■ 4.39
LYSMD4-207ENST00000484050 PTPRGP23470 1445 aa42.41■■■■■ 4.38
LYSMD4-207ENST00000484050 NPM1P06748 294 aaKnown RBP eCLIP42.41■■■■■ 4.38
LYSMD4-207ENST00000484050 MAPKBP1O60336 1514 aa42.4■■■■■ 4.38
LYSMD4-207ENST00000484050 TNIKQ9UKE5 1360 aa42.38■■■■■ 4.37
LYSMD4-207ENST00000484050 TTBK1Q5TCY1 1321 aaPredicted RBP42.35■■■■■ 4.37
LYSMD4-207ENST00000484050 DISP1Q96F81 1524 aa42.35■■■■■ 4.37
LYSMD4-207ENST00000484050 UGGT2Q9NYU1 1516 aa42.32■■■■■ 4.37
LYSMD4-207ENST00000484050 CTTNBP2Q8WZ74 1663 aa42.31■■■■■ 4.36
LYSMD4-207ENST00000484050 ABCC10Q5T3U5 1492 aa42.29■■■■■ 4.36
LYSMD4-207ENST00000484050 PRXQ9BXM0 1461 aa42.25■■■■■ 4.35
LYSMD4-207ENST00000484050 DIP2BQ9P265 1576 aa42.23■■■■■ 4.35
LYSMD4-207ENST00000484050 KIAA0556O60303 1618 aa42.21■■■■■ 4.35
LYSMD4-207ENST00000484050 FAM69CQ0P6D2 419 aa42.2■■■■■ 4.35
LYSMD4-207ENST00000484050 ABCC2Q92887 1545 aa42.16■■■■■ 4.34
LYSMD4-207ENST00000484050 UHRF1BP1LA0JNW5 1464 aa42.13■■■■■ 4.34
LYSMD4-207ENST00000484050 UACAQ9BZF9 1416 aa42.12■■■■■ 4.33
LYSMD4-207ENST00000484050 GOLGA3Q08378 1498 aa41.98■■■■■ 4.31
LYSMD4-207ENST00000484050 CSRNP3Q8WYN3 585 aa41.98■■■■■ 4.31
LYSMD4-207ENST00000484050 ASXL2Q76L83 1435 aa41.97■■■■■ 4.31
LYSMD4-207ENST00000484050 TSPOAP1O95153 1857 aa41.96■■■■■ 4.31
LYSMD4-207ENST00000484050 KDM5BQ9UGL1 1544 aa41.95■■■■■ 4.31
LYSMD4-207ENST00000484050 PLB1Q6P1J6 1458 aa41.93■■■■■ 4.3
LYSMD4-207ENST00000484050 ZCCHC11Q5TAX3 1644 aaKnown RBP41.91■■■■■ 4.3
LYSMD4-207ENST00000484050 EEA1Q15075 1411 aa41.89■■■■■ 4.3
LYSMD4-207ENST00000484050 GLI2P10070 1586 aa41.83■■■■■ 4.29
LYSMD4-207ENST00000484050 ABCA8O94911 1581 aa41.8■■■■■ 4.28
LYSMD4-207ENST00000484050 KDM6BO15054 1643 aa41.76■■■■■ 4.28
LYSMD4-207ENST00000484050 PPRC1Q5VV67 1664 aaKnown RBP41.74■■■■■ 4.27
LYSMD4-207ENST00000484050 FAM9AQ8IZU1 332 aaPredicted RBP41.73■■■■■ 4.27
LYSMD4-207ENST00000484050 EPRSP07814 1512 aaKnown RBP41.73■■■■■ 4.27
LYSMD4-207ENST00000484050 SAMD9Q5K651 1589 aa41.68■■■■■ 4.26
LYSMD4-207ENST00000484050 P3H3Q8IVL6 736 aa41.67■■■■■ 4.26
LYSMD4-207ENST00000484050 MAP3K4Q9Y6R4 1608 aa41.66■■■■■ 4.26
LYSMD4-207ENST00000484050 WDR7Q9Y4E6 1490 aa41.64■■■■■ 4.26
LYSMD4-207ENST00000484050 KIF21BO75037 1637 aa41.61■■■■■ 4.25
LYSMD4-207ENST00000484050 CHIC1Q5VXU3 224 aa41.6■■■■■ 4.25
LYSMD4-207ENST00000484050 AEBP2Q6ZN18 517 aaPredicted RBP41.57■■■■■ 4.25
LYSMD4-207ENST00000484050 RANGAP1P46060 587 aaPredicted RBP41.47■■■■■ 4.23
LYSMD4-207ENST00000484050 RAPGEF6Q8TEU7 1601 aa41.44■■■■■ 4.22
LYSMD4-207ENST00000484050 TEX14Q8IWB6 1497 aa41.43■■■■■ 4.22
LYSMD4-207ENST00000484050 ARID3CA6NKF2 412 aa41.43■■■■■ 4.22
LYSMD4-207ENST00000484050 ATP10BO94823 1461 aa41.42■■■■■ 4.22
LYSMD4-207ENST00000484050 KCNH8Q96L42 1107 aa41.41■■■■■ 4.22
LYSMD4-207ENST00000484050 CFAP43Q8NDM7 1665 aa41.4■■■■■ 4.22
LYSMD4-207ENST00000484050 FHOD3Q2V2M9 1422 aa41.38■■■■■ 4.22
LYSMD4-207ENST00000484050 COL17A1Q9UMD9 1497 aaPredicted RBP41.35■■■■■ 4.21
LYSMD4-207ENST00000484050 CD109Q6YHK3 1445 aa41.32■■■■■ 4.21
LYSMD4-207ENST00000484050 EFCAB5A4FU69 1503 aa41.31■■■■■ 4.2
LYSMD4-207ENST00000484050 MAGI3Q5TCQ9 1506 aa41.28■■■■■ 4.2
LYSMD4-207ENST00000484050 EHMT2Q96KQ7 1210 aa41.28■■■■■ 4.2
LYSMD4-207ENST00000484050 NUP153P49790 1475 aaKnown RBP41.27■■■■■ 4.2
LYSMD4-207ENST00000484050 UBTFP17480 764 aaKnown RBP41.2■■■■■ 4.19
LYSMD4-207ENST00000484050 ABCA9Q8IUA7 1624 aa41.16■■■■■ 4.18
LYSMD4-207ENST00000484050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.16■■■■■ 4.18
LYSMD4-207ENST00000484050 HNRNPUL2Q1KMD3 747 aaKnown RBP41.16■■■■■ 4.18
LYSMD4-207ENST00000484050 KDM4FA0A1W2PPD8 638 aa41.11■■■■■ 4.17
LYSMD4-207ENST00000484050 ARHGAP35Q9NRY4 1499 aa41.02■■■■■ 4.16
LYSMD4-207ENST00000484050 ARAP3Q8WWN8 1544 aa40.96■■■■■ 4.15
LYSMD4-207ENST00000484050 PLEKHD1A6NEE1 506 aa40.94■■■■■ 4.14
LYSMD4-207ENST00000484050 CDK13Q14004 1512 aaKnown RBP40.93■■■■■ 4.14
LYSMD4-207ENST00000484050 ADGRL1O94910 1474 aa40.92■■■■■ 4.14
LYSMD4-207ENST00000484050 FMN1Q68DA7 1419 aa40.92■■■■■ 4.14
LYSMD4-207ENST00000484050 HECW1Q76N89 1606 aa40.86■■■■■ 4.13
LYSMD4-207ENST00000484050 PHLDB1Q86UU1 1377 aa40.86■■■■■ 4.13
LYSMD4-207ENST00000484050 NEO1Q92859 1461 aa40.85■■■■■ 4.13
LYSMD4-207ENST00000484050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.83■■■■■ 4.13
LYSMD4-207ENST00000484050 TTC37Q6PGP7 1564 aa40.79■■■■■ 4.12
LYSMD4-207ENST00000484050 ATP1B4Q9UN42 357 aaPredicted RBP40.78■■■■■ 4.12
LYSMD4-207ENST00000484050 RAPGEF3O95398 923 aa40.71■■■■■ 4.11
LYSMD4-207ENST00000484050 LRRIQ1Q96JM4 1722 aa40.7■■■■■ 4.11
LYSMD4-207ENST00000484050 FRMPD1Q5SYB0 1578 aa40.7■■■■■ 4.11
LYSMD4-207ENST00000484050 CFAP74Q9C0B2 1584 aa40.67■■■■■ 4.1
LYSMD4-207ENST00000484050 FANCAO15360 1455 aa40.66■■■■■ 4.1
LYSMD4-207ENST00000484050 AKNAQ7Z591 1439 aa40.62■■■■■ 4.09
LYSMD4-207ENST00000484050 RICTORQ6R327 1708 aa40.59■■■■■ 4.09
LYSMD4-207ENST00000484050 PCF11O94913 1555 aaKnown RBP40.59■■■■■ 4.09
LYSMD4-207ENST00000484050 CDK11AQ9UQ88 783 aaPredicted RBP40.57■■■■■ 4.09
LYSMD4-207ENST00000484050 DENND4BO75064 1496 aaPredicted RBP40.57■■■■■ 4.08
LYSMD4-207ENST00000484050 KIF14Q15058 1648 aa40.56■■■■■ 4.08
LYSMD4-207ENST00000484050 MYO5CQ9NQX4 1742 aa40.53■■■■■ 4.08
LYSMD4-207ENST00000484050 PLCH2O75038 1416 aa40.53■■■■■ 4.08
LYSMD4-207ENST00000484050 CASKIN1Q8WXD9 1431 aa40.53■■■■■ 4.08
LYSMD4-207ENST00000484050 TROQ12816 1431 aaPredicted RBP40.52■■■■■ 4.08
LYSMD4-207ENST00000484050 CLIP1P30622 1438 aa40.5■■■■■ 4.07
LYSMD4-207ENST00000484050 ARHGEF40Q8TER5 1519 aa40.45■■■■■ 4.07
LYSMD4-207ENST00000484050 CCDC18Q5T9S5 1454 aa40.45■■■■■ 4.07
LYSMD4-207ENST00000484050 ZMYM4Q5VZL5 1548 aa40.41■■■■■ 4.06
LYSMD4-207ENST00000484050 FYCO1Q9BQS8 1478 aa40.4■■■■■ 4.06
LYSMD4-207ENST00000484050 SCAPERQ9BY12 1400 aa40.37■■■■■ 4.05
LYSMD4-207ENST00000484050 ADAMTSL3P82987 1691 aa40.37■■■■■ 4.05
LYSMD4-207ENST00000484050 EFCAB2Q5VUJ9 269 aa40.34■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms