RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 JPH4Q96JJ6 628 aa34.4■■■■□ 3.1
HPS4-213ENST00000483631 PRG4Q92954 1404 aaPredicted RBP34.38■■■■□ 3.09
HPS4-213ENST00000483631 KIAA0586Q9BVV6 1533 aa34.32■■■■□ 3.08
HPS4-213ENST00000483631 CARMIL1Q5VZK9 1371 aa34.26■■■■□ 3.08
HPS4-213ENST00000483631 IQGAP2Q13576 1575 aa34.02■■■■□ 3.04
HPS4-213ENST00000483631 RAPGEF2Q9Y4G8 1499 aa34.01■■■■□ 3.03
HPS4-213ENST00000483631 CARMIL2Q6F5E8 1435 aa33.97■■■■□ 3.03
HPS4-213ENST00000483631 ADCY10Q96PN6 1610 aa33.97■■■■□ 3.03
HPS4-213ENST00000483631 MAPKBP1O60336 1514 aa33.95■■■■□ 3.03
HPS4-213ENST00000483631 NPM1P06748 294 aaKnown RBP eCLIP33.94■■■■□ 3.02
HPS4-213ENST00000483631 KIF13AQ9H1H9 1805 aa33.94■■■■□ 3.02
HPS4-213ENST00000483631 PTPRGP23470 1445 aa33.9■■■■□ 3.02
HPS4-213ENST00000483631 TNIKQ9UKE5 1360 aa33.89■■■■□ 3.02
HPS4-213ENST00000483631 ABCC10Q5T3U5 1492 aa33.85■■■■□ 3.01
HPS4-213ENST00000483631 UGGT2Q9NYU1 1516 aa33.84■■■■□ 3.01
HPS4-213ENST00000483631 DISP1Q96F81 1524 aa33.8■■■■□ 3
HPS4-213ENST00000483631 DIP2BQ9P265 1576 aa33.76■■■□□ 2.99
HPS4-213ENST00000483631 CTTNBP2Q8WZ74 1663 aa33.74■■■□□ 2.99
HPS4-213ENST00000483631 UHRF1BP1LA0JNW5 1464 aa33.74■■■□□ 2.99
HPS4-213ENST00000483631 PRXQ9BXM0 1461 aa33.74■■■□□ 2.99
HPS4-213ENST00000483631 FAM69CQ0P6D2 419 aa33.72■■■□□ 2.99
HPS4-213ENST00000483631 ABCC2Q92887 1545 aa33.72■■■□□ 2.99
HPS4-213ENST00000483631 KIAA0556O60303 1618 aa33.69■■■□□ 2.98
HPS4-213ENST00000483631 UACAQ9BZF9 1416 aa33.67■■■□□ 2.98
HPS4-213ENST00000483631 TTBK1Q5TCY1 1321 aaPredicted RBP33.61■■■□□ 2.97
HPS4-213ENST00000483631 GOLGA3Q08378 1498 aa33.6■■■□□ 2.97
HPS4-213ENST00000483631 PLB1Q6P1J6 1458 aa33.58■■■□□ 2.97
HPS4-213ENST00000483631 KDM5BQ9UGL1 1544 aa33.56■■■□□ 2.96
HPS4-213ENST00000483631 EEA1Q15075 1411 aa33.53■■■□□ 2.96
HPS4-213ENST00000483631 ASXL2Q76L83 1435 aa33.53■■■□□ 2.96
HPS4-213ENST00000483631 CSRNP3Q8WYN3 585 aa33.5■■■□□ 2.95
HPS4-213ENST00000483631 GLI2P10070 1586 aa33.5■■■□□ 2.95
HPS4-213ENST00000483631 TSPOAP1O95153 1857 aa33.45■■■□□ 2.95
HPS4-213ENST00000483631 ZCCHC11Q5TAX3 1644 aaKnown RBP33.44■■■□□ 2.94
HPS4-213ENST00000483631 AEBP2Q6ZN18 517 aaPredicted RBP33.44■■■□□ 2.94
HPS4-213ENST00000483631 KDM6BO15054 1643 aa33.38■■■□□ 2.93
HPS4-213ENST00000483631 ABCA8O94911 1581 aa33.38■■■□□ 2.93
HPS4-213ENST00000483631 EPRSP07814 1512 aaKnown RBP33.35■■■□□ 2.93
HPS4-213ENST00000483631 PPRC1Q5VV67 1664 aaKnown RBP33.31■■■□□ 2.92
HPS4-213ENST00000483631 FAM9AQ8IZU1 332 aaPredicted RBP33.29■■■□□ 2.92
HPS4-213ENST00000483631 WDR7Q9Y4E6 1490 aa33.29■■■□□ 2.92
HPS4-213ENST00000483631 MAP3K4Q9Y6R4 1608 aa33.28■■■□□ 2.92
HPS4-213ENST00000483631 SAMD9Q5K651 1589 aa33.28■■■□□ 2.92
HPS4-213ENST00000483631 TEX14Q8IWB6 1497 aa33.2■■■□□ 2.91
HPS4-213ENST00000483631 KIF21BO75037 1637 aa33.2■■■□□ 2.9
HPS4-213ENST00000483631 CFAP43Q8NDM7 1665 aa33.12■■■□□ 2.89
HPS4-213ENST00000483631 P3H3Q8IVL6 736 aa33.11■■■□□ 2.89
HPS4-213ENST00000483631 CHIC1Q5VXU3 224 aa33.07■■■□□ 2.88
HPS4-213ENST00000483631 RAPGEF6Q8TEU7 1601 aa33.06■■■□□ 2.88
HPS4-213ENST00000483631 ATP10BO94823 1461 aa33.06■■■□□ 2.88
HPS4-213ENST00000483631 MAGI3Q5TCQ9 1506 aa33.06■■■□□ 2.88
HPS4-213ENST00000483631 CD109Q6YHK3 1445 aa33.03■■■□□ 2.88
HPS4-213ENST00000483631 EFCAB5A4FU69 1503 aa33.03■■■□□ 2.88
HPS4-213ENST00000483631 COL17A1Q9UMD9 1497 aaPredicted RBP33■■■□□ 2.87
HPS4-213ENST00000483631 KCNH8Q96L42 1107 aa32.99■■■□□ 2.87
HPS4-213ENST00000483631 FHOD3Q2V2M9 1422 aa32.95■■■□□ 2.87
HPS4-213ENST00000483631 NUP153P49790 1475 aaKnown RBP32.93■■■□□ 2.86
HPS4-213ENST00000483631 ABCA9Q8IUA7 1624 aa32.9■■■□□ 2.86
HPS4-213ENST00000483631 ARID3CA6NKF2 412 aa32.87■■■□□ 2.85
HPS4-213ENST00000483631 RANGAP1P46060 587 aaPredicted RBP32.87■■■□□ 2.85
HPS4-213ENST00000483631 KDM4FA0A1W2PPD8 638 aa32.85■■■□□ 2.85
HPS4-213ENST00000483631 PHLDB1Q86UU1 1377 aa32.83■■■□□ 2.85
HPS4-213ENST00000483631 UBTFP17480 764 aaKnown RBP32.8■■■□□ 2.84
HPS4-213ENST00000483631 ARAP3Q8WWN8 1544 aa32.8■■■□□ 2.84
HPS4-213ENST00000483631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.79■■■□□ 2.84
HPS4-213ENST00000483631 HNRNPUL2Q1KMD3 747 aaKnown RBP32.79■■■□□ 2.84
HPS4-213ENST00000483631 PLEKHD1A6NEE1 506 aa32.72■■■□□ 2.83
HPS4-213ENST00000483631 NEO1Q92859 1461 aa32.72■■■□□ 2.83
HPS4-213ENST00000483631 FMN1Q68DA7 1419 aa32.71■■■□□ 2.83
HPS4-213ENST00000483631 ADGRL1O94910 1474 aa32.69■■■□□ 2.82
HPS4-213ENST00000483631 ARHGAP35Q9NRY4 1499 aa32.69■■■□□ 2.82
HPS4-213ENST00000483631 HECW1Q76N89 1606 aa32.62■■■□□ 2.81
HPS4-213ENST00000483631 EHMT2Q96KQ7 1210 aa32.61■■■□□ 2.81
HPS4-213ENST00000483631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.58■■■□□ 2.81
HPS4-213ENST00000483631 CDK13Q14004 1512 aaKnown RBP32.57■■■□□ 2.8
HPS4-213ENST00000483631 CFAP74Q9C0B2 1584 aa32.56■■■□□ 2.8
HPS4-213ENST00000483631 TTC37Q6PGP7 1564 aa32.5■■■□□ 2.79
HPS4-213ENST00000483631 CDK11AQ9UQ88 783 aaPredicted RBP32.48■■■□□ 2.79
HPS4-213ENST00000483631 FANCAO15360 1455 aa32.48■■■□□ 2.79
HPS4-213ENST00000483631 FRMPD1Q5SYB0 1578 aa32.47■■■□□ 2.79
HPS4-213ENST00000483631 AKNAQ7Z591 1439 aa32.46■■■□□ 2.79
HPS4-213ENST00000483631 RAPGEF3O95398 923 aa32.46■■■□□ 2.79
HPS4-213ENST00000483631 DENND4BO75064 1496 aaPredicted RBP32.43■■■□□ 2.78
HPS4-213ENST00000483631 ATP1B4Q9UN42 357 aaPredicted RBP32.42■■■□□ 2.78
HPS4-213ENST00000483631 RICTORQ6R327 1708 aa32.42■■■□□ 2.78
HPS4-213ENST00000483631 PLCH2O75038 1416 aa32.4■■■□□ 2.78
HPS4-213ENST00000483631 TROQ12816 1431 aaPredicted RBP32.37■■■□□ 2.77
HPS4-213ENST00000483631 CASKIN1Q8WXD9 1431 aa32.37■■■□□ 2.77
HPS4-213ENST00000483631 LRRIQ1Q96JM4 1722 aa32.37■■■□□ 2.77
HPS4-213ENST00000483631 MYO5CQ9NQX4 1742 aa32.35■■■□□ 2.77
HPS4-213ENST00000483631 KIF14Q15058 1648 aa32.35■■■□□ 2.77
HPS4-213ENST00000483631 ZMYM4Q5VZL5 1548 aa32.34■■■□□ 2.77
HPS4-213ENST00000483631 CCDC18Q5T9S5 1454 aa32.34■■■□□ 2.77
HPS4-213ENST00000483631 CLIP1P30622 1438 aa32.34■■■□□ 2.77
HPS4-213ENST00000483631 ARHGEF40Q8TER5 1519 aa32.33■■■□□ 2.77
HPS4-213ENST00000483631 PCF11O94913 1555 aaKnown RBP32.31■■■□□ 2.76
HPS4-213ENST00000483631 MAGI2Q86UL8 1455 aa32.29■■■□□ 2.76
HPS4-213ENST00000483631 ADAMTSL3P82987 1691 aa32.28■■■□□ 2.76
HPS4-213ENST00000483631 FYCO1Q9BQS8 1478 aa32.27■■■□□ 2.76
HPS4-213ENST00000483631 EFCAB2Q5VUJ9 269 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms