RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
PTPN18-212ENST00000483617 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
PTPN18-212ENST00000483617 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
PTPN18-212ENST00000483617 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
PTPN18-212ENST00000483617 CARMIL1Q5VZK9 1371 aa18.98■□□□□ 0.63
PTPN18-212ENST00000483617 IQGAP2Q13576 1575 aa18.87■□□□□ 0.61
PTPN18-212ENST00000483617 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
PTPN18-212ENST00000483617 ADCY10Q96PN6 1610 aa18.85■□□□□ 0.61
PTPN18-212ENST00000483617 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
PTPN18-212ENST00000483617 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
PTPN18-212ENST00000483617 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
PTPN18-212ENST00000483617 PTPRGP23470 1445 aa18.78■□□□□ 0.6
PTPN18-212ENST00000483617 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
PTPN18-212ENST00000483617 NPM1P06748 294 aaKnown RBP eCLIP18.77■□□□□ 0.6
PTPN18-212ENST00000483617 DISP1Q96F81 1524 aa18.75■□□□□ 0.59
PTPN18-212ENST00000483617 UGGT2Q9NYU1 1516 aa18.75■□□□□ 0.59
PTPN18-212ENST00000483617 ABCC10Q5T3U5 1492 aa18.74■□□□□ 0.59
PTPN18-212ENST00000483617 DIP2BQ9P265 1576 aa18.72■□□□□ 0.59
PTPN18-212ENST00000483617 CTTNBP2Q8WZ74 1663 aa18.71■□□□□ 0.59
PTPN18-212ENST00000483617 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
PTPN18-212ENST00000483617 KIAA0556O60303 1618 aa18.71■□□□□ 0.58
PTPN18-212ENST00000483617 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
PTPN18-212ENST00000483617 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
PTPN18-212ENST00000483617 FAM69CQ0P6D2 419 aa18.68■□□□□ 0.58
PTPN18-212ENST00000483617 UHRF1BP1LA0JNW5 1464 aa18.67■□□□□ 0.58
PTPN18-212ENST00000483617 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
PTPN18-212ENST00000483617 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
PTPN18-212ENST00000483617 PLB1Q6P1J6 1458 aa18.58■□□□□ 0.57
PTPN18-212ENST00000483617 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
PTPN18-212ENST00000483617 KDM5BQ9UGL1 1544 aa18.58■□□□□ 0.56
PTPN18-212ENST00000483617 EEA1Q15075 1411 aa18.57■□□□□ 0.56
PTPN18-212ENST00000483617 ZCCHC11Q5TAX3 1644 aaKnown RBP18.56■□□□□ 0.56
PTPN18-212ENST00000483617 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
PTPN18-212ENST00000483617 GLI2P10070 1586 aa18.54■□□□□ 0.56
PTPN18-212ENST00000483617 TSPOAP1O95153 1857 aa18.54■□□□□ 0.56
PTPN18-212ENST00000483617 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
PTPN18-212ENST00000483617 KDM6BO15054 1643 aa18.51■□□□□ 0.55
PTPN18-212ENST00000483617 ABCA8O94911 1581 aa18.51■□□□□ 0.55
PTPN18-212ENST00000483617 EPRSP07814 1512 aaKnown RBP18.49■□□□□ 0.55
PTPN18-212ENST00000483617 PPRC1Q5VV67 1664 aaKnown RBP18.47■□□□□ 0.55
PTPN18-212ENST00000483617 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
PTPN18-212ENST00000483617 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.54
PTPN18-212ENST00000483617 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
PTPN18-212ENST00000483617 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
PTPN18-212ENST00000483617 KIF21BO75037 1637 aa18.41■□□□□ 0.54
PTPN18-212ENST00000483617 P3H3Q8IVL6 736 aa18.39■□□□□ 0.53
PTPN18-212ENST00000483617 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.53
PTPN18-212ENST00000483617 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
PTPN18-212ENST00000483617 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
PTPN18-212ENST00000483617 ATP10BO94823 1461 aa18.33■□□□□ 0.52
PTPN18-212ENST00000483617 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
PTPN18-212ENST00000483617 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
PTPN18-212ENST00000483617 MAGI3Q5TCQ9 1506 aa18.3■□□□□ 0.52
PTPN18-212ENST00000483617 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
PTPN18-212ENST00000483617 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
PTPN18-212ENST00000483617 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
PTPN18-212ENST00000483617 CD109Q6YHK3 1445 aa18.3■□□□□ 0.52
PTPN18-212ENST00000483617 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
PTPN18-212ENST00000483617 KCNH8Q96L42 1107 aa18.29■□□□□ 0.52
PTPN18-212ENST00000483617 NUP153P49790 1475 aaKnown RBP18.27■□□□□ 0.52
PTPN18-212ENST00000483617 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
PTPN18-212ENST00000483617 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
PTPN18-212ENST00000483617 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
PTPN18-212ENST00000483617 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
PTPN18-212ENST00000483617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
PTPN18-212ENST00000483617 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
PTPN18-212ENST00000483617 ADGRL1O94910 1474 aa18.14■□□□□ 0.5
PTPN18-212ENST00000483617 ARHGAP35Q9NRY4 1499 aa18.14■□□□□ 0.5
PTPN18-212ENST00000483617 ARAP3Q8WWN8 1544 aa18.14■□□□□ 0.49
PTPN18-212ENST00000483617 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
PTPN18-212ENST00000483617 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
PTPN18-212ENST00000483617 PLEKHD1A6NEE1 506 aa18.11■□□□□ 0.49
PTPN18-212ENST00000483617 NEO1Q92859 1461 aa18.11■□□□□ 0.49
PTPN18-212ENST00000483617 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
PTPN18-212ENST00000483617 HECW1Q76N89 1606 aa18.11■□□□□ 0.49
PTPN18-212ENST00000483617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.08■□□□□ 0.48
PTPN18-212ENST00000483617 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
PTPN18-212ENST00000483617 CFAP74Q9C0B2 1584 aa18.04■□□□□ 0.48
PTPN18-212ENST00000483617 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
PTPN18-212ENST00000483617 FANCAO15360 1455 aa18.01■□□□□ 0.47
PTPN18-212ENST00000483617 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
PTPN18-212ENST00000483617 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
PTPN18-212ENST00000483617 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
PTPN18-212ENST00000483617 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
PTPN18-212ENST00000483617 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
PTPN18-212ENST00000483617 DENND4BO75064 1496 aaPredicted RBP17.97■□□□□ 0.47
PTPN18-212ENST00000483617 RICTORQ6R327 1708 aa17.97■□□□□ 0.47
PTPN18-212ENST00000483617 LRRIQ1Q96JM4 1722 aa17.97■□□□□ 0.47
PTPN18-212ENST00000483617 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.47
PTPN18-212ENST00000483617 KIF14Q15058 1648 aa17.96■□□□□ 0.47
PTPN18-212ENST00000483617 PLCH2O75038 1416 aa17.95■□□□□ 0.46
PTPN18-212ENST00000483617 TROQ12816 1431 aaPredicted RBP17.95■□□□□ 0.46
PTPN18-212ENST00000483617 ARHGEF40Q8TER5 1519 aa17.94■□□□□ 0.46
PTPN18-212ENST00000483617 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
PTPN18-212ENST00000483617 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
PTPN18-212ENST00000483617 CLIP1P30622 1438 aa17.93■□□□□ 0.46
PTPN18-212ENST00000483617 CCDC18Q5T9S5 1454 aa17.93■□□□□ 0.46
PTPN18-212ENST00000483617 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
PTPN18-212ENST00000483617 FYCO1Q9BQS8 1478 aa17.9■□□□□ 0.46
PTPN18-212ENST00000483617 ADAMTSL3P82987 1691 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms