RNA–Protein interactions for RNA: ENST00000483457.1

EEFSEC-202, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

TSL 5 BASIC

Gene EEFSEC, Length 1,859 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-202ENST00000483457 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
EEFSEC-202ENST00000483457 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
EEFSEC-202ENST00000483457 DIEXFQ68CQ4 756 aaKnown RBP25.12■■□□□ 1.61
EEFSEC-202ENST00000483457 OSCARQ8IYS5 282 aa25.12■■□□□ 1.61
EEFSEC-202ENST00000483457 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
EEFSEC-202ENST00000483457 IGF1RP08069 1367 aa25.05■■□□□ 1.6
EEFSEC-202ENST00000483457 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
EEFSEC-202ENST00000483457 ZNF316A6NFI3 1004 aaPredicted RBP25.04■■□□□ 1.6
EEFSEC-202ENST00000483457 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
EEFSEC-202ENST00000483457 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
EEFSEC-202ENST00000483457 HNRNPUL2Q1KMD3 747 aaKnown RBP25.02■■□□□ 1.6
EEFSEC-202ENST00000483457 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
EEFSEC-202ENST00000483457 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
EEFSEC-202ENST00000483457 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
EEFSEC-202ENST00000483457 RRBP1Q9P2E9 1410 aaKnown RBP24.96■■□□□ 1.59
EEFSEC-202ENST00000483457 MAP3K1Q13233 1512 aa24.95■■□□□ 1.59
EEFSEC-202ENST00000483457 SCAF1Q9H7N4 1312 aaKnown RBP24.94■■□□□ 1.58
EEFSEC-202ENST00000483457 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
EEFSEC-202ENST00000483457 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
EEFSEC-202ENST00000483457 CHD1O14646 1710 aa24.91■■□□□ 1.58
EEFSEC-202ENST00000483457 RANGAP1P46060 587 aaPredicted RBP24.91■■□□□ 1.58
EEFSEC-202ENST00000483457 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
EEFSEC-202ENST00000483457 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.58
EEFSEC-202ENST00000483457 GRIN2AQ12879 1464 aa24.88■■□□□ 1.57
EEFSEC-202ENST00000483457 KANK4Q5T7N3 995 aaPredicted RBP24.82■■□□□ 1.56
EEFSEC-202ENST00000483457 CUL7Q14999 1698 aa24.8■■□□□ 1.56
EEFSEC-202ENST00000483457 PELP1Q8IZL8 1130 aaKnown RBP24.79■■□□□ 1.56
EEFSEC-202ENST00000483457 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
EEFSEC-202ENST00000483457 TIAM1Q13009 1591 aa24.78■■□□□ 1.56
EEFSEC-202ENST00000483457 CCNB3Q8WWL7 1395 aa24.77■■□□□ 1.56
EEFSEC-202ENST00000483457 NUP160Q12769 1436 aa24.75■■□□□ 1.55
EEFSEC-202ENST00000483457 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
EEFSEC-202ENST00000483457 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
EEFSEC-202ENST00000483457 CFAP43Q8NDM7 1665 aa24.68■■□□□ 1.54
EEFSEC-202ENST00000483457 CLASP1Q7Z460 1538 aa24.68■■□□□ 1.54
EEFSEC-202ENST00000483457 EFCAB5A4FU69 1503 aa24.67■■□□□ 1.54
EEFSEC-202ENST00000483457 JPH4Q96JJ6 628 aa24.64■■□□□ 1.54
EEFSEC-202ENST00000483457 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.54
EEFSEC-202ENST00000483457 CTTNBP2Q8WZ74 1663 aa24.6■■□□□ 1.53
EEFSEC-202ENST00000483457 KIAA0586Q9BVV6 1533 aa24.6■■□□□ 1.53
EEFSEC-202ENST00000483457 ARHGEF11O15085 1522 aa24.58■■□□□ 1.52
EEFSEC-202ENST00000483457 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
EEFSEC-202ENST00000483457 PCF11O94913 1555 aaKnown RBP24.55■■□□□ 1.52
EEFSEC-202ENST00000483457 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
EEFSEC-202ENST00000483457 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
EEFSEC-202ENST00000483457 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
EEFSEC-202ENST00000483457 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
EEFSEC-202ENST00000483457 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
EEFSEC-202ENST00000483457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.51
EEFSEC-202ENST00000483457 CASKIN1Q8WXD9 1431 aa24.5■■□□□ 1.51
EEFSEC-202ENST00000483457 MIER1Q8N108 512 aa24.49■■□□□ 1.51
EEFSEC-202ENST00000483457 GTF3C3Q9Y5Q9 886 aa24.47■■□□□ 1.51
EEFSEC-202ENST00000483457 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
EEFSEC-202ENST00000483457 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.51
EEFSEC-202ENST00000483457 IQGAP2Q13576 1575 aa24.45■■□□□ 1.5
EEFSEC-202ENST00000483457 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
EEFSEC-202ENST00000483457 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
EEFSEC-202ENST00000483457 PHLDB1Q86UU1 1377 aa24.43■■□□□ 1.5
EEFSEC-202ENST00000483457 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
EEFSEC-202ENST00000483457 MAPKBP1O60336 1514 aa24.39■■□□□ 1.49
EEFSEC-202ENST00000483457 FHOD3Q2V2M9 1422 aa24.38■■□□□ 1.49
EEFSEC-202ENST00000483457 SAMD9Q5K651 1589 aa24.38■■□□□ 1.49
EEFSEC-202ENST00000483457 CARMIL2Q6F5E8 1435 aa24.37■■□□□ 1.49
EEFSEC-202ENST00000483457 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
EEFSEC-202ENST00000483457 UGGT2Q9NYU1 1516 aa24.32■■□□□ 1.48
EEFSEC-202ENST00000483457 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
EEFSEC-202ENST00000483457 ITGAEP38570 1179 aa24.3■■□□□ 1.48
EEFSEC-202ENST00000483457 DISP1Q96F81 1524 aa24.29■■□□□ 1.48
EEFSEC-202ENST00000483457 PTPRGP23470 1445 aa24.28■■□□□ 1.48
EEFSEC-202ENST00000483457 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
EEFSEC-202ENST00000483457 YTHDC1Q96MU7 727 aaKnown RBP24.24■■□□□ 1.47
EEFSEC-202ENST00000483457 FGD6Q6ZV73 1430 aa24.23■■□□□ 1.47
EEFSEC-202ENST00000483457 KIAA0556O60303 1618 aa24.19■■□□□ 1.46
EEFSEC-202ENST00000483457 ATP1B4Q9UN42 357 aaPredicted RBP24.17■■□□□ 1.46
EEFSEC-202ENST00000483457 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
EEFSEC-202ENST00000483457 SUPT6HQ7KZ85 1726 aaKnown RBP24.17■■□□□ 1.46
EEFSEC-202ENST00000483457 LRRIQ1Q96JM4 1722 aa24.17■■□□□ 1.46
EEFSEC-202ENST00000483457 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
EEFSEC-202ENST00000483457 CCDC18Q5T9S5 1454 aa24.14■■□□□ 1.46
EEFSEC-202ENST00000483457 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
EEFSEC-202ENST00000483457 MYOM3Q5VTT5 1437 aa24.11■■□□□ 1.45
EEFSEC-202ENST00000483457 NPM1P06748 294 aaKnown RBP eCLIP24.11■■□□□ 1.45
EEFSEC-202ENST00000483457 NCOA2Q15596 1464 aa24.09■■□□□ 1.45
EEFSEC-202ENST00000483457 UACAQ9BZF9 1416 aa24.08■■□□□ 1.45
EEFSEC-202ENST00000483457 HECW1Q76N89 1606 aa24.06■■□□□ 1.44
EEFSEC-202ENST00000483457 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
EEFSEC-202ENST00000483457 PLB1Q6P1J6 1458 aa24.04■■□□□ 1.44
EEFSEC-202ENST00000483457 TCOF1Q13428 1488 aaKnown RBP24■■□□□ 1.43
EEFSEC-202ENST00000483457 ADCY10Q96PN6 1610 aa23.99■■□□□ 1.43
EEFSEC-202ENST00000483457 ARID3CA6NKF2 412 aa23.99■■□□□ 1.43
EEFSEC-202ENST00000483457 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
EEFSEC-202ENST00000483457 SIN3AQ96ST3 1273 aa23.98■■□□□ 1.43
EEFSEC-202ENST00000483457 AKNAQ7Z591 1439 aa23.97■■□□□ 1.43
EEFSEC-202ENST00000483457 UHRF1BP1LA0JNW5 1464 aa23.97■■□□□ 1.43
EEFSEC-202ENST00000483457 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
EEFSEC-202ENST00000483457 NAIPQ13075 1403 aa23.97■■□□□ 1.43
EEFSEC-202ENST00000483457 ABCC2Q92887 1545 aa23.96■■□□□ 1.43
EEFSEC-202ENST00000483457 PTPRKQ15262 1439 aa23.95■■□□□ 1.43
EEFSEC-202ENST00000483457 GCC2Q8IWJ2 1684 aa23.94■■□□□ 1.42
EEFSEC-202ENST00000483457 ABCA8O94911 1581 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms