RNA–Protein interactions for RNA: ENST00000482935.5

DNMT3A-212, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-212ENST00000482935 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
DNMT3A-212ENST00000482935 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
DNMT3A-212ENST00000482935 SHROOM2Q13796 1616 aa13.85□□□□□ -0.19
DNMT3A-212ENST00000482935 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
DNMT3A-212ENST00000482935 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.2
DNMT3A-212ENST00000482935 EEA1Q15075 1411 aa13.82□□□□□ -0.2
DNMT3A-212ENST00000482935 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
DNMT3A-212ENST00000482935 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-212ENST00000482935 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
DNMT3A-212ENST00000482935 IQGAP2Q13576 1575 aa13.78□□□□□ -0.2
DNMT3A-212ENST00000482935 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
DNMT3A-212ENST00000482935 CTTNBP2Q8WZ74 1663 aa13.71□□□□□ -0.21
DNMT3A-212ENST00000482935 TTBK1Q5TCY1 1321 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-212ENST00000482935 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
DNMT3A-212ENST00000482935 PTPRGP23470 1445 aa13.68□□□□□ -0.22
DNMT3A-212ENST00000482935 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
DNMT3A-212ENST00000482935 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-212ENST00000482935 DISP1Q96F81 1524 aa13.67□□□□□ -0.22
DNMT3A-212ENST00000482935 KIF21BO75037 1637 aa13.66□□□□□ -0.22
DNMT3A-212ENST00000482935 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
DNMT3A-212ENST00000482935 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
DNMT3A-212ENST00000482935 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
DNMT3A-212ENST00000482935 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
DNMT3A-212ENST00000482935 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-212ENST00000482935 RANGAP1P46060 587 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-212ENST00000482935 ADCY10Q96PN6 1610 aa13.6□□□□□ -0.23
DNMT3A-212ENST00000482935 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
DNMT3A-212ENST00000482935 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
DNMT3A-212ENST00000482935 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
DNMT3A-212ENST00000482935 ABCC2Q92887 1545 aa13.54□□□□□ -0.24
DNMT3A-212ENST00000482935 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
DNMT3A-212ENST00000482935 MAPKBP1O60336 1514 aa13.53□□□□□ -0.24
DNMT3A-212ENST00000482935 PLB1Q6P1J6 1458 aa13.52□□□□□ -0.25
DNMT3A-212ENST00000482935 EFCAB5A4FU69 1503 aa13.5□□□□□ -0.25
DNMT3A-212ENST00000482935 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
DNMT3A-212ENST00000482935 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
DNMT3A-212ENST00000482935 FAM69CQ0P6D2 419 aa13.48□□□□□ -0.25
DNMT3A-212ENST00000482935 ABCA8O94911 1581 aa13.48□□□□□ -0.25
DNMT3A-212ENST00000482935 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
DNMT3A-212ENST00000482935 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
DNMT3A-212ENST00000482935 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
DNMT3A-212ENST00000482935 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-212ENST00000482935 DIP2BQ9P265 1576 aa13.43□□□□□ -0.26
DNMT3A-212ENST00000482935 KIF13AQ9H1H9 1805 aa13.43□□□□□ -0.26
DNMT3A-212ENST00000482935 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
DNMT3A-212ENST00000482935 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
DNMT3A-212ENST00000482935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-212ENST00000482935 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-212ENST00000482935 WDR7Q9Y4E6 1490 aa13.4□□□□□ -0.26
DNMT3A-212ENST00000482935 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
DNMT3A-212ENST00000482935 ATP10BO94823 1461 aa13.38□□□□□ -0.27
DNMT3A-212ENST00000482935 NUP153P49790 1475 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-212ENST00000482935 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-212ENST00000482935 KCNH8Q96L42 1107 aa13.37□□□□□ -0.27
DNMT3A-212ENST00000482935 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-212ENST00000482935 CLIP1P30622 1438 aa13.37□□□□□ -0.27
DNMT3A-212ENST00000482935 GLI2P10070 1586 aa13.36□□□□□ -0.27
DNMT3A-212ENST00000482935 TSPOAP1O95153 1857 aa13.32□□□□□ -0.28
DNMT3A-212ENST00000482935 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
DNMT3A-212ENST00000482935 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
DNMT3A-212ENST00000482935 PLEKHD1A6NEE1 506 aa13.31□□□□□ -0.28
DNMT3A-212ENST00000482935 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
DNMT3A-212ENST00000482935 MAP3K4Q9Y6R4 1608 aa13.29□□□□□ -0.28
DNMT3A-212ENST00000482935 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
DNMT3A-212ENST00000482935 CDK13Q14004 1512 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-212ENST00000482935 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
DNMT3A-212ENST00000482935 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
DNMT3A-212ENST00000482935 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
DNMT3A-212ENST00000482935 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
DNMT3A-212ENST00000482935 CFAP43Q8NDM7 1665 aa13.26□□□□□ -0.29
DNMT3A-212ENST00000482935 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-212ENST00000482935 KDM6BO15054 1643 aa13.24□□□□□ -0.29
DNMT3A-212ENST00000482935 FYCO1Q9BQS8 1478 aa13.24□□□□□ -0.29
DNMT3A-212ENST00000482935 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
DNMT3A-212ENST00000482935 ABCA9Q8IUA7 1624 aa13.23□□□□□ -0.29
DNMT3A-212ENST00000482935 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
DNMT3A-212ENST00000482935 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-212ENST00000482935 LRRIQ1Q96JM4 1722 aa13.18□□□□□ -0.3
DNMT3A-212ENST00000482935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
DNMT3A-212ENST00000482935 KIF14Q15058 1648 aa13.17□□□□□ -0.3
DNMT3A-212ENST00000482935 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
DNMT3A-212ENST00000482935 PHLDB1Q86UU1 1377 aa13.16□□□□□ -0.3
DNMT3A-212ENST00000482935 NEO1Q92859 1461 aa13.15□□□□□ -0.3
DNMT3A-212ENST00000482935 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-212ENST00000482935 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
DNMT3A-212ENST00000482935 FANCAO15360 1455 aa13.12□□□□□ -0.31
DNMT3A-212ENST00000482935 ARAP3Q8WWN8 1544 aa13.12□□□□□ -0.31
DNMT3A-212ENST00000482935 PLCH2O75038 1416 aa13.12□□□□□ -0.31
DNMT3A-212ENST00000482935 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
DNMT3A-212ENST00000482935 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
DNMT3A-212ENST00000482935 AKNAQ7Z591 1439 aa13.1□□□□□ -0.31
DNMT3A-212ENST00000482935 EFCAB2Q5VUJ9 269 aa13.09□□□□□ -0.31
DNMT3A-212ENST00000482935 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
DNMT3A-212ENST00000482935 ARHGAP5Q13017 1502 aa13.08□□□□□ -0.31
DNMT3A-212ENST00000482935 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
DNMT3A-212ENST00000482935 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-212ENST00000482935 ADGRL1O94910 1474 aa13.06□□□□□ -0.32
DNMT3A-212ENST00000482935 EHBP1L1Q8N3D4 1523 aa13.06□□□□□ -0.32
DNMT3A-212ENST00000482935 APLP2Q06481 763 aa13.05□□□□□ -0.32
DNMT3A-212ENST00000482935 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms