RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 JPH4Q96JJ6 628 aa25.58■■□□□ 1.69
COL16A1-213ENST00000482910 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
COL16A1-213ENST00000482910 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
COL16A1-213ENST00000482910 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
COL16A1-213ENST00000482910 PRXQ9BXM0 1461 aa25.46■■□□□ 1.67
COL16A1-213ENST00000482910 EEA1Q15075 1411 aa25.46■■□□□ 1.67
COL16A1-213ENST00000482910 IQGAP2Q13576 1575 aa25.44■■□□□ 1.66
COL16A1-213ENST00000482910 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
COL16A1-213ENST00000482910 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
COL16A1-213ENST00000482910 CARMIL2Q6F5E8 1435 aa25.33■■□□□ 1.65
COL16A1-213ENST00000482910 CTTNBP2Q8WZ74 1663 aa25.32■■□□□ 1.64
COL16A1-213ENST00000482910 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
COL16A1-213ENST00000482910 DISP1Q96F81 1524 aa25.26■■□□□ 1.63
COL16A1-213ENST00000482910 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
COL16A1-213ENST00000482910 PTPRGP23470 1445 aa25.22■■□□□ 1.63
COL16A1-213ENST00000482910 KIAA0556O60303 1618 aa25.19■■□□□ 1.62
COL16A1-213ENST00000482910 KIF21BO75037 1637 aa25.17■■□□□ 1.62
COL16A1-213ENST00000482910 ADCY10Q96PN6 1610 aa25.17■■□□□ 1.62
COL16A1-213ENST00000482910 GOLGA3Q08378 1498 aa25.16■■□□□ 1.62
COL16A1-213ENST00000482910 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
COL16A1-213ENST00000482910 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
COL16A1-213ENST00000482910 UHRF1BP1LA0JNW5 1464 aa25.09■■□□□ 1.61
COL16A1-213ENST00000482910 NPM1P06748 294 aaKnown RBP eCLIP25.09■■□□□ 1.61
COL16A1-213ENST00000482910 MAPKBP1O60336 1514 aa25.08■■□□□ 1.61
COL16A1-213ENST00000482910 UACAQ9BZF9 1416 aa25.06■■□□□ 1.6
COL16A1-213ENST00000482910 ABCC2Q92887 1545 aa25.04■■□□□ 1.6
COL16A1-213ENST00000482910 TTBK1Q5TCY1 1321 aaPredicted RBP25.02■■□□□ 1.6
COL16A1-213ENST00000482910 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
COL16A1-213ENST00000482910 KIF13AQ9H1H9 1805 aa24.96■■□□□ 1.59
COL16A1-213ENST00000482910 KDM5BQ9UGL1 1544 aa24.96■■□□□ 1.59
COL16A1-213ENST00000482910 ABCC10Q5T3U5 1492 aa24.96■■□□□ 1.59
COL16A1-213ENST00000482910 ABCA8O94911 1581 aa24.93■■□□□ 1.58
COL16A1-213ENST00000482910 PLB1Q6P1J6 1458 aa24.92■■□□□ 1.58
COL16A1-213ENST00000482910 DIP2BQ9P265 1576 aa24.9■■□□□ 1.58
COL16A1-213ENST00000482910 EFCAB5A4FU69 1503 aa24.89■■□□□ 1.57
COL16A1-213ENST00000482910 ZCCHC11Q5TAX3 1644 aaKnown RBP24.87■■□□□ 1.57
COL16A1-213ENST00000482910 ASXL2Q76L83 1435 aa24.86■■□□□ 1.57
COL16A1-213ENST00000482910 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
COL16A1-213ENST00000482910 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
COL16A1-213ENST00000482910 FAM69CQ0P6D2 419 aa24.84■■□□□ 1.57
COL16A1-213ENST00000482910 GLI2P10070 1586 aa24.79■■□□□ 1.56
COL16A1-213ENST00000482910 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
COL16A1-213ENST00000482910 RAPGEF6Q8TEU7 1601 aa24.77■■□□□ 1.56
COL16A1-213ENST00000482910 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
COL16A1-213ENST00000482910 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
COL16A1-213ENST00000482910 WDR7Q9Y4E6 1490 aa24.74■■□□□ 1.55
COL16A1-213ENST00000482910 EPRSP07814 1512 aaKnown RBP24.73■■□□□ 1.55
COL16A1-213ENST00000482910 ATP10BO94823 1461 aa24.7■■□□□ 1.55
COL16A1-213ENST00000482910 ARHGAP35Q9NRY4 1499 aa24.7■■□□□ 1.55
COL16A1-213ENST00000482910 NUP153P49790 1475 aaKnown RBP24.67■■□□□ 1.54
COL16A1-213ENST00000482910 TSPOAP1O95153 1857 aa24.65■■□□□ 1.54
COL16A1-213ENST00000482910 FMN1Q68DA7 1419 aa24.65■■□□□ 1.54
COL16A1-213ENST00000482910 MAP3K4Q9Y6R4 1608 aa24.64■■□□□ 1.54
COL16A1-213ENST00000482910 PPRC1Q5VV67 1664 aaKnown RBP24.6■■□□□ 1.53
COL16A1-213ENST00000482910 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
COL16A1-213ENST00000482910 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
COL16A1-213ENST00000482910 TEX14Q8IWB6 1497 aa24.55■■□□□ 1.52
COL16A1-213ENST00000482910 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
COL16A1-213ENST00000482910 HECW1Q76N89 1606 aa24.53■■□□□ 1.52
COL16A1-213ENST00000482910 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
COL16A1-213ENST00000482910 KDM6BO15054 1643 aa24.52■■□□□ 1.52
COL16A1-213ENST00000482910 MAGI3Q5TCQ9 1506 aa24.51■■□□□ 1.51
COL16A1-213ENST00000482910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
COL16A1-213ENST00000482910 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
COL16A1-213ENST00000482910 CLIP1P30622 1438 aa24.51■■□□□ 1.51
COL16A1-213ENST00000482910 CD109Q6YHK3 1445 aa24.51■■□□□ 1.51
COL16A1-213ENST00000482910 ABCA9Q8IUA7 1624 aa24.49■■□□□ 1.51
COL16A1-213ENST00000482910 PLEKHD1A6NEE1 506 aa24.47■■□□□ 1.51
COL16A1-213ENST00000482910 CDK13Q14004 1512 aaKnown RBP24.45■■□□□ 1.51
COL16A1-213ENST00000482910 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
COL16A1-213ENST00000482910 PCF11O94913 1555 aaKnown RBP24.4■■□□□ 1.5
COL16A1-213ENST00000482910 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
COL16A1-213ENST00000482910 CDK11AQ9UQ88 783 aaPredicted RBP24.38■■□□□ 1.49
COL16A1-213ENST00000482910 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
COL16A1-213ENST00000482910 CEP162Q5TB80 1403 aa24.37■■□□□ 1.49
COL16A1-213ENST00000482910 LRRIQ1Q96JM4 1722 aa24.37■■□□□ 1.49
COL16A1-213ENST00000482910 CCDC18Q5T9S5 1454 aa24.37■■□□□ 1.49
COL16A1-213ENST00000482910 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
COL16A1-213ENST00000482910 COL17A1Q9UMD9 1497 aaPredicted RBP24.36■■□□□ 1.49
COL16A1-213ENST00000482910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.34■■□□□ 1.49
COL16A1-213ENST00000482910 NEO1Q92859 1461 aa24.32■■□□□ 1.48
COL16A1-213ENST00000482910 TROQ12816 1431 aaPredicted RBP24.31■■□□□ 1.48
COL16A1-213ENST00000482910 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
COL16A1-213ENST00000482910 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
COL16A1-213ENST00000482910 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
COL16A1-213ENST00000482910 KIF14Q15058 1648 aa24.25■■□□□ 1.47
COL16A1-213ENST00000482910 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
COL16A1-213ENST00000482910 PLCH2O75038 1416 aa24.21■■□□□ 1.47
COL16A1-213ENST00000482910 FANCAO15360 1455 aa24.2■■□□□ 1.47
COL16A1-213ENST00000482910 MYO5CQ9NQX4 1742 aa24.18■■□□□ 1.46
COL16A1-213ENST00000482910 AKNAQ7Z591 1439 aa24.17■■□□□ 1.46
COL16A1-213ENST00000482910 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
COL16A1-213ENST00000482910 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
COL16A1-213ENST00000482910 EFCAB2Q5VUJ9 269 aa24.1■■□□□ 1.45
COL16A1-213ENST00000482910 FRMPD1Q5SYB0 1578 aa24.1■■□□□ 1.45
COL16A1-213ENST00000482910 RICTORQ6R327 1708 aa24.09■■□□□ 1.45
COL16A1-213ENST00000482910 PREX2Q70Z35 1606 aa24.07■■□□□ 1.44
COL16A1-213ENST00000482910 RAPGEF3O95398 923 aa24.07■■□□□ 1.44
COL16A1-213ENST00000482910 ADGRL1O94910 1474 aa24.07■■□□□ 1.44
COL16A1-213ENST00000482910 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms