RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
COL16A1-212ENST00000482478 TRHP20396 242 aaPredicted RBP26.82■■□□□ 1.88
COL16A1-212ENST00000482478 KIAA0586Q9BVV6 1533 aa26.81■■□□□ 1.88
COL16A1-212ENST00000482478 JPH4Q96JJ6 628 aa26.77■■□□□ 1.88
COL16A1-212ENST00000482478 IQGAP2Q13576 1575 aa26.71■■□□□ 1.87
COL16A1-212ENST00000482478 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
COL16A1-212ENST00000482478 CARMIL2Q6F5E8 1435 aa26.58■■□□□ 1.85
COL16A1-212ENST00000482478 ADCY10Q96PN6 1610 aa26.57■■□□□ 1.84
COL16A1-212ENST00000482478 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
COL16A1-212ENST00000482478 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
COL16A1-212ENST00000482478 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
COL16A1-212ENST00000482478 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
COL16A1-212ENST00000482478 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
COL16A1-212ENST00000482478 KIAA0556O60303 1618 aa26.48■■□□□ 1.83
COL16A1-212ENST00000482478 PTPRGP23470 1445 aa26.48■■□□□ 1.83
COL16A1-212ENST00000482478 DISP1Q96F81 1524 aa26.47■■□□□ 1.83
COL16A1-212ENST00000482478 MAPKBP1O60336 1514 aa26.45■■□□□ 1.83
COL16A1-212ENST00000482478 NPM1P06748 294 aaKnown RBP eCLIP26.44■■□□□ 1.82
COL16A1-212ENST00000482478 KIF13AQ9H1H9 1805 aa26.4■■□□□ 1.82
COL16A1-212ENST00000482478 EEA1Q15075 1411 aa26.39■■□□□ 1.82
COL16A1-212ENST00000482478 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
COL16A1-212ENST00000482478 GOLGA3Q08378 1498 aa26.35■■□□□ 1.81
COL16A1-212ENST00000482478 ABCC2Q92887 1545 aa26.34■■□□□ 1.81
COL16A1-212ENST00000482478 ABCC10Q5T3U5 1492 aa26.33■■□□□ 1.81
COL16A1-212ENST00000482478 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
COL16A1-212ENST00000482478 UHRF1BP1LA0JNW5 1464 aa26.3■■□□□ 1.8
COL16A1-212ENST00000482478 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
COL16A1-212ENST00000482478 FAM69CQ0P6D2 419 aa26.25■■□□□ 1.79
COL16A1-212ENST00000482478 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
COL16A1-212ENST00000482478 ZCCHC11Q5TAX3 1644 aaKnown RBP26.21■■□□□ 1.79
COL16A1-212ENST00000482478 KIF21BO75037 1637 aa26.21■■□□□ 1.79
COL16A1-212ENST00000482478 ASXL2Q76L83 1435 aa26.2■■□□□ 1.78
COL16A1-212ENST00000482478 PLB1Q6P1J6 1458 aa26.18■■□□□ 1.78
COL16A1-212ENST00000482478 KDM5BQ9UGL1 1544 aa26.18■■□□□ 1.78
COL16A1-212ENST00000482478 SAMD9Q5K651 1589 aa26.16■■□□□ 1.78
COL16A1-212ENST00000482478 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
COL16A1-212ENST00000482478 ABCA8O94911 1581 aa26.14■■□□□ 1.78
COL16A1-212ENST00000482478 TSPOAP1O95153 1857 aa26.13■■□□□ 1.77
COL16A1-212ENST00000482478 GLI2P10070 1586 aa26.07■■□□□ 1.76
COL16A1-212ENST00000482478 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
COL16A1-212ENST00000482478 WDR7Q9Y4E6 1490 aa26.05■■□□□ 1.76
COL16A1-212ENST00000482478 EPRSP07814 1512 aaKnown RBP26.05■■□□□ 1.76
COL16A1-212ENST00000482478 RANGAP1P46060 587 aaPredicted RBP26.05■■□□□ 1.76
COL16A1-212ENST00000482478 KDM6BO15054 1643 aa26.05■■□□□ 1.76
COL16A1-212ENST00000482478 EFCAB5A4FU69 1503 aa26.01■■□□□ 1.75
COL16A1-212ENST00000482478 FHOD3Q2V2M9 1422 aa26■■□□□ 1.75
COL16A1-212ENST00000482478 RAPGEF6Q8TEU7 1601 aa25.99■■□□□ 1.75
COL16A1-212ENST00000482478 EHMT2Q96KQ7 1210 aa25.99■■□□□ 1.75
COL16A1-212ENST00000482478 MAP3K4Q9Y6R4 1608 aa25.99■■□□□ 1.75
COL16A1-212ENST00000482478 PPRC1Q5VV67 1664 aaKnown RBP25.98■■□□□ 1.75
COL16A1-212ENST00000482478 ARID3CA6NKF2 412 aa25.95■■□□□ 1.74
COL16A1-212ENST00000482478 TEX14Q8IWB6 1497 aa25.91■■□□□ 1.74
COL16A1-212ENST00000482478 UBTFP17480 764 aaKnown RBP25.9■■□□□ 1.74
COL16A1-212ENST00000482478 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
COL16A1-212ENST00000482478 ATP10BO94823 1461 aa25.85■■□□□ 1.73
COL16A1-212ENST00000482478 NUP153P49790 1475 aaKnown RBP25.85■■□□□ 1.73
COL16A1-212ENST00000482478 KCNH8Q96L42 1107 aa25.81■■□□□ 1.72
COL16A1-212ENST00000482478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
COL16A1-212ENST00000482478 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
COL16A1-212ENST00000482478 CD109Q6YHK3 1445 aa25.79■■□□□ 1.72
COL16A1-212ENST00000482478 MAGI3Q5TCQ9 1506 aa25.76■■□□□ 1.71
COL16A1-212ENST00000482478 ARHGAP35Q9NRY4 1499 aa25.75■■□□□ 1.71
COL16A1-212ENST00000482478 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
COL16A1-212ENST00000482478 HECW1Q76N89 1606 aa25.74■■□□□ 1.71
COL16A1-212ENST00000482478 ABCA9Q8IUA7 1624 aa25.74■■□□□ 1.71
COL16A1-212ENST00000482478 FMN1Q68DA7 1419 aa25.71■■□□□ 1.71
COL16A1-212ENST00000482478 CDK13Q14004 1512 aaKnown RBP25.68■■□□□ 1.7
COL16A1-212ENST00000482478 COL17A1Q9UMD9 1497 aaPredicted RBP25.67■■□□□ 1.7
COL16A1-212ENST00000482478 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
COL16A1-212ENST00000482478 PCF11O94913 1555 aaKnown RBP25.59■■□□□ 1.69
COL16A1-212ENST00000482478 TTC37Q6PGP7 1564 aa25.57■■□□□ 1.68
COL16A1-212ENST00000482478 PLEKHD1A6NEE1 506 aa25.57■■□□□ 1.68
COL16A1-212ENST00000482478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.54■■□□□ 1.68
COL16A1-212ENST00000482478 NEO1Q92859 1461 aa25.53■■□□□ 1.68
COL16A1-212ENST00000482478 CFAP74Q9C0B2 1584 aa25.53■■□□□ 1.68
COL16A1-212ENST00000482478 CLIP1P30622 1438 aa25.52■■□□□ 1.68
COL16A1-212ENST00000482478 ARAP3Q8WWN8 1544 aa25.52■■□□□ 1.68
COL16A1-212ENST00000482478 KIF14Q15058 1648 aa25.49■■□□□ 1.67
COL16A1-212ENST00000482478 LRRIQ1Q96JM4 1722 aa25.49■■□□□ 1.67
COL16A1-212ENST00000482478 ADGRL1O94910 1474 aa25.48■■□□□ 1.67
COL16A1-212ENST00000482478 PHLDB1Q86UU1 1377 aa25.47■■□□□ 1.67
COL16A1-212ENST00000482478 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
COL16A1-212ENST00000482478 FANCAO15360 1455 aa25.46■■□□□ 1.67
COL16A1-212ENST00000482478 CASKIN1Q8WXD9 1431 aa25.46■■□□□ 1.67
COL16A1-212ENST00000482478 FYCO1Q9BQS8 1478 aa25.44■■□□□ 1.66
COL16A1-212ENST00000482478 FRMPD1Q5SYB0 1578 aa25.44■■□□□ 1.66
COL16A1-212ENST00000482478 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
COL16A1-212ENST00000482478 MYO5CQ9NQX4 1742 aa25.42■■□□□ 1.66
COL16A1-212ENST00000482478 TROQ12816 1431 aaPredicted RBP25.41■■□□□ 1.66
COL16A1-212ENST00000482478 KDM4FA0A1W2PPD8 638 aa25.41■■□□□ 1.66
COL16A1-212ENST00000482478 AKNAQ7Z591 1439 aa25.37■■□□□ 1.65
COL16A1-212ENST00000482478 DENND4BO75064 1496 aaPredicted RBP25.36■■□□□ 1.65
COL16A1-212ENST00000482478 ARHGEF40Q8TER5 1519 aa25.35■■□□□ 1.65
COL16A1-212ENST00000482478 RICTORQ6R327 1708 aa25.34■■□□□ 1.65
COL16A1-212ENST00000482478 RAPGEF3O95398 923 aa25.34■■□□□ 1.65
COL16A1-212ENST00000482478 CEP162Q5TB80 1403 aa25.34■■□□□ 1.65
COL16A1-212ENST00000482478 ARHGAP5Q13017 1502 aa25.32■■□□□ 1.64
COL16A1-212ENST00000482478 PLCH2O75038 1416 aa25.32■■□□□ 1.64
COL16A1-212ENST00000482478 ZMYM4Q5VZL5 1548 aa25.28■■□□□ 1.64
COL16A1-212ENST00000482478 POGZQ7Z3K3 1410 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms