RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
SORT1-204ENST00000482236 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
SORT1-204ENST00000482236 SHROOM2Q13796 1616 aa19.02■□□□□ 0.64
SORT1-204ENST00000482236 TTBK1Q5TCY1 1321 aaPredicted RBP18.97■□□□□ 0.63
SORT1-204ENST00000482236 KIAA0586Q9BVV6 1533 aa18.96■□□□□ 0.63
SORT1-204ENST00000482236 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
SORT1-204ENST00000482236 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
SORT1-204ENST00000482236 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
SORT1-204ENST00000482236 IQGAP2Q13576 1575 aa18.88■□□□□ 0.61
SORT1-204ENST00000482236 PTPRGP23470 1445 aa18.81■□□□□ 0.6
SORT1-204ENST00000482236 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
SORT1-204ENST00000482236 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
SORT1-204ENST00000482236 ADCY10Q96PN6 1610 aa18.73■□□□□ 0.59
SORT1-204ENST00000482236 CTTNBP2Q8WZ74 1663 aa18.72■□□□□ 0.59
SORT1-204ENST00000482236 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
SORT1-204ENST00000482236 EEA1Q15075 1411 aa18.69■□□□□ 0.58
SORT1-204ENST00000482236 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
SORT1-204ENST00000482236 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
SORT1-204ENST00000482236 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
SORT1-204ENST00000482236 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
SORT1-204ENST00000482236 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
SORT1-204ENST00000482236 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
SORT1-204ENST00000482236 MAPKBP1O60336 1514 aa18.66■□□□□ 0.58
SORT1-204ENST00000482236 UACAQ9BZF9 1416 aa18.65■□□□□ 0.58
SORT1-204ENST00000482236 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
SORT1-204ENST00000482236 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
SORT1-204ENST00000482236 ABCC10Q5T3U5 1492 aa18.62■□□□□ 0.57
SORT1-204ENST00000482236 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
SORT1-204ENST00000482236 DIP2BQ9P265 1576 aa18.59■□□□□ 0.57
SORT1-204ENST00000482236 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.57
SORT1-204ENST00000482236 P3H3Q8IVL6 736 aa18.58■□□□□ 0.56
SORT1-204ENST00000482236 UHRF1BP1LA0JNW5 1464 aa18.58■□□□□ 0.56
SORT1-204ENST00000482236 ASXL2Q76L83 1435 aa18.56■□□□□ 0.56
SORT1-204ENST00000482236 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
SORT1-204ENST00000482236 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
SORT1-204ENST00000482236 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
SORT1-204ENST00000482236 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
SORT1-204ENST00000482236 TSPOAP1O95153 1857 aa18.5■□□□□ 0.55
SORT1-204ENST00000482236 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
SORT1-204ENST00000482236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
SORT1-204ENST00000482236 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
SORT1-204ENST00000482236 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
SORT1-204ENST00000482236 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
SORT1-204ENST00000482236 KIF21BO75037 1637 aa18.47■□□□□ 0.55
SORT1-204ENST00000482236 KDM6BO15054 1643 aa18.45■□□□□ 0.54
SORT1-204ENST00000482236 WDR7Q9Y4E6 1490 aa18.44■□□□□ 0.54
SORT1-204ENST00000482236 KCNH8Q96L42 1107 aa18.43■□□□□ 0.54
SORT1-204ENST00000482236 ABCA8O94911 1581 aa18.42■□□□□ 0.54
SORT1-204ENST00000482236 EPRSP07814 1512 aaKnown RBP18.41■□□□□ 0.54
SORT1-204ENST00000482236 SAMD9Q5K651 1589 aa18.41■□□□□ 0.54
SORT1-204ENST00000482236 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
SORT1-204ENST00000482236 GLI2P10070 1586 aa18.39■□□□□ 0.53
SORT1-204ENST00000482236 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.53
SORT1-204ENST00000482236 EFCAB5A4FU69 1503 aa18.37■□□□□ 0.53
SORT1-204ENST00000482236 RAPGEF6Q8TEU7 1601 aa18.36■□□□□ 0.53
SORT1-204ENST00000482236 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
SORT1-204ENST00000482236 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
SORT1-204ENST00000482236 CD109Q6YHK3 1445 aa18.31■□□□□ 0.52
SORT1-204ENST00000482236 ATP10BO94823 1461 aa18.28■□□□□ 0.52
SORT1-204ENST00000482236 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
SORT1-204ENST00000482236 CFAP43Q8NDM7 1665 aa18.26■□□□□ 0.51
SORT1-204ENST00000482236 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
SORT1-204ENST00000482236 PLEKHD1A6NEE1 506 aa18.24■□□□□ 0.51
SORT1-204ENST00000482236 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
SORT1-204ENST00000482236 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
SORT1-204ENST00000482236 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
SORT1-204ENST00000482236 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
SORT1-204ENST00000482236 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
SORT1-204ENST00000482236 CDK11AQ9UQ88 783 aaPredicted RBP18.15■□□□□ 0.5
SORT1-204ENST00000482236 ABCA9Q8IUA7 1624 aa18.14■□□□□ 0.49
SORT1-204ENST00000482236 COL17A1Q9UMD9 1497 aaPredicted RBP18.11■□□□□ 0.49
SORT1-204ENST00000482236 CLIP1P30622 1438 aa18.09■□□□□ 0.49
SORT1-204ENST00000482236 PHLDB1Q86UU1 1377 aa18.08■□□□□ 0.49
SORT1-204ENST00000482236 NEO1Q92859 1461 aa18.07■□□□□ 0.48
SORT1-204ENST00000482236 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
SORT1-204ENST00000482236 ADGRL1O94910 1474 aa18.05■□□□□ 0.48
SORT1-204ENST00000482236 FANCAO15360 1455 aa18.04■□□□□ 0.48
SORT1-204ENST00000482236 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
SORT1-204ENST00000482236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.48
SORT1-204ENST00000482236 ARAP3Q8WWN8 1544 aa18.03■□□□□ 0.48
SORT1-204ENST00000482236 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
SORT1-204ENST00000482236 KIF14Q15058 1648 aa18.03■□□□□ 0.48
SORT1-204ENST00000482236 TTC37Q6PGP7 1564 aa18.03■□□□□ 0.48
SORT1-204ENST00000482236 RAPGEF3O95398 923 aa18.02■□□□□ 0.48
SORT1-204ENST00000482236 KDM4FA0A1W2PPD8 638 aa18.01■□□□□ 0.47
SORT1-204ENST00000482236 ARID4BQ4LE39 1312 aaPredicted RBP18■□□□□ 0.47
SORT1-204ENST00000482236 CASKIN1Q8WXD9 1431 aa18■□□□□ 0.47
SORT1-204ENST00000482236 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
SORT1-204ENST00000482236 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
SORT1-204ENST00000482236 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
SORT1-204ENST00000482236 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
SORT1-204ENST00000482236 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
SORT1-204ENST00000482236 ARHGAP5Q13017 1502 aa17.96■□□□□ 0.47
SORT1-204ENST00000482236 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
SORT1-204ENST00000482236 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
SORT1-204ENST00000482236 PLCH2O75038 1416 aa17.93■□□□□ 0.46
SORT1-204ENST00000482236 CEP162Q5TB80 1403 aa17.93■□□□□ 0.46
SORT1-204ENST00000482236 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
SORT1-204ENST00000482236 FRMPD1Q5SYB0 1578 aa17.89■□□□□ 0.45
SORT1-204ENST00000482236 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms