RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 CEP162Q5TB80 1403 aa23.38■■□□□ 1.33
PCCB-215ENST00000482086 NUP160Q12769 1436 aa23.34■■□□□ 1.33
PCCB-215ENST00000482086 KIAA0586Q9BVV6 1533 aa23.33■■□□□ 1.33
PCCB-215ENST00000482086 CLIP1P30622 1438 aa23.31■■□□□ 1.32
PCCB-215ENST00000482086 IQGAP2Q13576 1575 aa23.31■■□□□ 1.32
PCCB-215ENST00000482086 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
PCCB-215ENST00000482086 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
PCCB-215ENST00000482086 RANGAP1P46060 587 aaPredicted RBP23.21■■□□□ 1.31
PCCB-215ENST00000482086 UGGT2Q9NYU1 1516 aa23.2■■□□□ 1.3
PCCB-215ENST00000482086 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
PCCB-215ENST00000482086 SAMD9Q5K651 1589 aa23.16■■□□□ 1.3
PCCB-215ENST00000482086 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
PCCB-215ENST00000482086 JPH4Q96JJ6 628 aa23.13■■□□□ 1.29
PCCB-215ENST00000482086 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
PCCB-215ENST00000482086 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
PCCB-215ENST00000482086 SHROOM2Q13796 1616 aa23.09■■□□□ 1.29
PCCB-215ENST00000482086 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
PCCB-215ENST00000482086 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
PCCB-215ENST00000482086 KIAA0556O60303 1618 aa23.06■■□□□ 1.28
PCCB-215ENST00000482086 DISP1Q96F81 1524 aa23.05■■□□□ 1.28
PCCB-215ENST00000482086 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
PCCB-215ENST00000482086 FHOD3Q2V2M9 1422 aa23.02■■□□□ 1.28
PCCB-215ENST00000482086 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
PCCB-215ENST00000482086 PRG4Q92954 1404 aaPredicted RBP23.01■■□□□ 1.27
PCCB-215ENST00000482086 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
PCCB-215ENST00000482086 FYCO1Q9BQS8 1478 aa22.89■■□□□ 1.25
PCCB-215ENST00000482086 APLP2Q06481 763 aa22.88■■□□□ 1.25
PCCB-215ENST00000482086 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
PCCB-215ENST00000482086 PTPRGP23470 1445 aa22.85■■□□□ 1.25
PCCB-215ENST00000482086 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
PCCB-215ENST00000482086 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
PCCB-215ENST00000482086 RAPGEF6Q8TEU7 1601 aa22.81■■□□□ 1.24
PCCB-215ENST00000482086 MAP3K1Q13233 1512 aa22.8■■□□□ 1.24
PCCB-215ENST00000482086 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
PCCB-215ENST00000482086 ATP1B4Q9UN42 357 aaPredicted RBP22.78■■□□□ 1.24
PCCB-215ENST00000482086 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
PCCB-215ENST00000482086 ABCA8O94911 1581 aa22.75■■□□□ 1.23
PCCB-215ENST00000482086 CFAP43Q8NDM7 1665 aa22.73■■□□□ 1.23
PCCB-215ENST00000482086 PLB1Q6P1J6 1458 aa22.72■■□□□ 1.23
PCCB-215ENST00000482086 TIAM1Q13009 1591 aa22.72■■□□□ 1.23
PCCB-215ENST00000482086 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
PCCB-215ENST00000482086 ARHGEF11O15085 1522 aa22.7■■□□□ 1.22
PCCB-215ENST00000482086 LRRIQ1Q96JM4 1722 aa22.69■■□□□ 1.22
PCCB-215ENST00000482086 EPRSP07814 1512 aaKnown RBP22.69■■□□□ 1.22
PCCB-215ENST00000482086 NUP153P49790 1475 aaKnown RBP22.68■■□□□ 1.22
PCCB-215ENST00000482086 UHRF1BP1LA0JNW5 1464 aa22.67■■□□□ 1.22
PCCB-215ENST00000482086 ABCC2Q92887 1545 aa22.66■■□□□ 1.22
PCCB-215ENST00000482086 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
PCCB-215ENST00000482086 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
PCCB-215ENST00000482086 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
PCCB-215ENST00000482086 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
PCCB-215ENST00000482086 LRRC9Q6ZRR7 1453 aa22.61■■□□□ 1.21
PCCB-215ENST00000482086 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
PCCB-215ENST00000482086 MTUS2Q5JR59 1369 aa22.58■■□□□ 1.2
PCCB-215ENST00000482086 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
PCCB-215ENST00000482086 ATP10BO94823 1461 aa22.57■■□□□ 1.2
PCCB-215ENST00000482086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
PCCB-215ENST00000482086 HNRNPUL2Q1KMD3 747 aaKnown RBP22.57■■□□□ 1.2
PCCB-215ENST00000482086 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
PCCB-215ENST00000482086 EHBP1L1Q8N3D4 1523 aa22.56■■□□□ 1.2
PCCB-215ENST00000482086 ADCY10Q96PN6 1610 aa22.54■■□□□ 1.2
PCCB-215ENST00000482086 KDM5BQ9UGL1 1544 aa22.54■■□□□ 1.2
PCCB-215ENST00000482086 ARID3CA6NKF2 412 aa22.53■■□□□ 1.2
PCCB-215ENST00000482086 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
PCCB-215ENST00000482086 ZCCHC11Q5TAX3 1644 aaKnown RBP22.5■■□□□ 1.19
PCCB-215ENST00000482086 SUPT6HQ7KZ85 1726 aaKnown RBP22.5■■□□□ 1.19
PCCB-215ENST00000482086 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
PCCB-215ENST00000482086 MAGI3Q5TCQ9 1506 aa22.47■■□□□ 1.19
PCCB-215ENST00000482086 TROQ12816 1431 aaPredicted RBP22.47■■□□□ 1.19
PCCB-215ENST00000482086 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
PCCB-215ENST00000482086 TRIM26Q12899 539 aaPredicted RBP22.43■■□□□ 1.18
PCCB-215ENST00000482086 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
PCCB-215ENST00000482086 KIF14Q15058 1648 aa22.39■■□□□ 1.17
PCCB-215ENST00000482086 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.16
PCCB-215ENST00000482086 PHLDB1Q86UU1 1377 aa22.33■■□□□ 1.16
PCCB-215ENST00000482086 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
PCCB-215ENST00000482086 MYOM3Q5VTT5 1437 aa22.31■■□□□ 1.16
PCCB-215ENST00000482086 ASXL2Q76L83 1435 aa22.31■■□□□ 1.16
PCCB-215ENST00000482086 RRBP1Q9P2E9 1410 aaKnown RBP22.3■■□□□ 1.16
PCCB-215ENST00000482086 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
PCCB-215ENST00000482086 MAPKBP1O60336 1514 aa22.29■■□□□ 1.16
PCCB-215ENST00000482086 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
PCCB-215ENST00000482086 ABCC10Q5T3U5 1492 aa22.27■■□□□ 1.16
PCCB-215ENST00000482086 MIA2Q96PC5 1412 aa22.26■■□□□ 1.15
PCCB-215ENST00000482086 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
PCCB-215ENST00000482086 KCNH8Q96L42 1107 aa22.25■■□□□ 1.15
PCCB-215ENST00000482086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.24■■□□□ 1.15
PCCB-215ENST00000482086 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
PCCB-215ENST00000482086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.153e-8■■■□□ 16.7
PCCB-215ENST00000482086 GPATCH8Q9UKJ3 1502 aaKnown RBP22.22■■□□□ 1.15
PCCB-215ENST00000482086 PCGF6Q9BYE7 350 aa22.21■■□□□ 1.15
PCCB-215ENST00000482086 MYO5CQ9NQX4 1742 aa22.21■■□□□ 1.15
PCCB-215ENST00000482086 TTC37Q6PGP7 1564 aa22.19■■□□□ 1.14
PCCB-215ENST00000482086 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
PCCB-215ENST00000482086 PTPN23Q9H3S7 1636 aa22.19■■□□□ 1.14
PCCB-215ENST00000482086 CFDP1Q9UEE9 299 aaPredicted RBP22.18■■□□□ 1.14
PCCB-215ENST00000482086 PREX2Q70Z35 1606 aa22.18■■□□□ 1.14
PCCB-215ENST00000482086 TCOF1Q13428 1488 aaKnown RBP22.17■■□□□ 1.14
PCCB-215ENST00000482086 CDC42BPBQ9Y5S2 1711 aa22.15■■□□□ 1.14
PCCB-215ENST00000482086 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms