RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-213ENST00000482028 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
PABPC4-213ENST00000482028 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
PABPC4-213ENST00000482028 AQRO60306 1485 aaKnown RBP eCLIP19.83■□□□□ 0.761e-6■■■■□ 19.6
PABPC4-213ENST00000482028 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
PABPC4-213ENST00000482028 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
PABPC4-213ENST00000482028 FMN1Q68DA7 1419 aa19.77■□□□□ 0.76
PABPC4-213ENST00000482028 SAMD9Q5K651 1589 aa19.74■□□□□ 0.75
PABPC4-213ENST00000482028 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
PABPC4-213ENST00000482028 MAGI1Q96QZ7 1491 aaPredicted RBP19.73■□□□□ 0.75
PABPC4-213ENST00000482028 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
PABPC4-213ENST00000482028 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
PABPC4-213ENST00000482028 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
PABPC4-213ENST00000482028 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
PABPC4-213ENST00000482028 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
PABPC4-213ENST00000482028 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
PABPC4-213ENST00000482028 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
PABPC4-213ENST00000482028 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
PABPC4-213ENST00000482028 IQGAP2Q13576 1575 aa19.66■□□□□ 0.74
PABPC4-213ENST00000482028 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
PABPC4-213ENST00000482028 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
PABPC4-213ENST00000482028 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
PABPC4-213ENST00000482028 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
PABPC4-213ENST00000482028 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
PABPC4-213ENST00000482028 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
PABPC4-213ENST00000482028 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
PABPC4-213ENST00000482028 LRRC9Q6ZRR7 1453 aa19.58■□□□□ 0.72
PABPC4-213ENST00000482028 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
PABPC4-213ENST00000482028 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
PABPC4-213ENST00000482028 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
PABPC4-213ENST00000482028 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
PABPC4-213ENST00000482028 FHOD3Q2V2M9 1422 aa19.53■□□□□ 0.72
PABPC4-213ENST00000482028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.72
PABPC4-213ENST00000482028 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
PABPC4-213ENST00000482028 ARHGEF11O15085 1522 aa19.49■□□□□ 0.71
PABPC4-213ENST00000482028 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
PABPC4-213ENST00000482028 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
PABPC4-213ENST00000482028 CCER1Q8TC90 406 aaPredicted RBP19.45■□□□□ 0.7
PABPC4-213ENST00000482028 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
PABPC4-213ENST00000482028 KANK4Q5T7N3 995 aaPredicted RBP19.44■□□□□ 0.7
PABPC4-213ENST00000482028 NUP160Q12769 1436 aa19.43■□□□□ 0.7
PABPC4-213ENST00000482028 KIAA0556O60303 1618 aa19.43■□□□□ 0.7
PABPC4-213ENST00000482028 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
PABPC4-213ENST00000482028 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
PABPC4-213ENST00000482028 SUPT6HQ7KZ85 1726 aaKnown RBP19.4■□□□□ 0.7
PABPC4-213ENST00000482028 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
PABPC4-213ENST00000482028 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.69
PABPC4-213ENST00000482028 MTUS2Q5JR59 1369 aa19.36■□□□□ 0.69
PABPC4-213ENST00000482028 P3H3Q8IVL6 736 aa19.34■□□□□ 0.69
PABPC4-213ENST00000482028 CEP170Q5SW79 1584 aa19.34■□□□□ 0.69
PABPC4-213ENST00000482028 DISP1Q96F81 1524 aa19.34■□□□□ 0.69
PABPC4-213ENST00000482028 ACIN1Q9UKV3 1341 aaKnown RBP19.33■□□□□ 0.69
PABPC4-213ENST00000482028 EPRSP07814 1512 aaKnown RBP19.3■□□□□ 0.68
PABPC4-213ENST00000482028 RAPGEF6Q8TEU7 1601 aa19.3■□□□□ 0.68
PABPC4-213ENST00000482028 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
PABPC4-213ENST00000482028 LRRIQ1Q96JM4 1722 aa19.3■□□□□ 0.68
PABPC4-213ENST00000482028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
PABPC4-213ENST00000482028 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
PABPC4-213ENST00000482028 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
PABPC4-213ENST00000482028 PHLDB1Q86UU1 1377 aa19.27■□□□□ 0.68
PABPC4-213ENST00000482028 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
PABPC4-213ENST00000482028 MYOM3Q5VTT5 1437 aa19.25■□□□□ 0.67
PABPC4-213ENST00000482028 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
PABPC4-213ENST00000482028 MIA2Q96PC5 1412 aa19.25■□□□□ 0.67
PABPC4-213ENST00000482028 NCOA2Q15596 1464 aa19.23■□□□□ 0.67
PABPC4-213ENST00000482028 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
PABPC4-213ENST00000482028 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
PABPC4-213ENST00000482028 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
PABPC4-213ENST00000482028 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
PABPC4-213ENST00000482028 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
PABPC4-213ENST00000482028 CHD1O14646 1710 aa19.17■□□□□ 0.66
PABPC4-213ENST00000482028 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
PABPC4-213ENST00000482028 ADCY10Q96PN6 1610 aa19.15■□□□□ 0.66
PABPC4-213ENST00000482028 AKNAQ7Z591 1439 aa19.15■□□□□ 0.66
PABPC4-213ENST00000482028 PTPN23Q9H3S7 1636 aa19.14■□□□□ 0.66
PABPC4-213ENST00000482028 FBLN2P98095 1184 aa19.14■□□□□ 0.65
PABPC4-213ENST00000482028 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.65
PABPC4-213ENST00000482028 ABCA8O94911 1581 aa19.12■□□□□ 0.65
PABPC4-213ENST00000482028 DHX57Q6P158 1386 aaKnown RBP19.11■□□□□ 0.65
PABPC4-213ENST00000482028 TROQ12816 1431 aaPredicted RBP19.1■□□□□ 0.65
PABPC4-213ENST00000482028 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
PABPC4-213ENST00000482028 MAGI3Q5TCQ9 1506 aa19.09■□□□□ 0.65
PABPC4-213ENST00000482028 HFM1A2PYH4 1435 aa19.08■□□□□ 0.65
PABPC4-213ENST00000482028 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.64
PABPC4-213ENST00000482028 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
PABPC4-213ENST00000482028 TIMELESSQ9UNS1 1208 aa19.06■□□□□ 0.64
PABPC4-213ENST00000482028 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
PABPC4-213ENST00000482028 PTPRGP23470 1445 aa19.02■□□□□ 0.64
PABPC4-213ENST00000482028 GCC2Q8IWJ2 1684 aa19.01■□□□□ 0.63
PABPC4-213ENST00000482028 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
PABPC4-213ENST00000482028 KIF14Q15058 1648 aa19.01■□□□□ 0.63
PABPC4-213ENST00000482028 ROCK1Q13464 1354 aa19■□□□□ 0.63
PABPC4-213ENST00000482028 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
PABPC4-213ENST00000482028 DNMT1P26358 1616 aaKnown RBP18.97■□□□□ 0.63
PABPC4-213ENST00000482028 PLEKHD1A6NEE1 506 aa18.96■□□□□ 0.63
PABPC4-213ENST00000482028 UACAQ9BZF9 1416 aa18.96■□□□□ 0.63
PABPC4-213ENST00000482028 ITGAEP38570 1179 aa18.94■□□□□ 0.62
PABPC4-213ENST00000482028 UHRF1BP1LA0JNW5 1464 aa18.94■□□□□ 0.62
PABPC4-213ENST00000482028 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
PABPC4-213ENST00000482028 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
PABPC4-213ENST00000482028 ABCC2Q92887 1545 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms