RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 NUP160Q12769 1436 aa19.23■□□□□ 0.67
SNRNP25-206ENST00000481947 FBLN2P98095 1184 aa19.22■□□□□ 0.67
SNRNP25-206ENST00000481947 CEP162Q5TB80 1403 aa19.2■□□□□ 0.66
SNRNP25-206ENST00000481947 KIAA0586Q9BVV6 1533 aa19.18■□□□□ 0.66
SNRNP25-206ENST00000481947 IQGAP2Q13576 1575 aa19.18■□□□□ 0.66
SNRNP25-206ENST00000481947 CLIP1P30622 1438 aa19.14■□□□□ 0.65
SNRNP25-206ENST00000481947 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
SNRNP25-206ENST00000481947 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
SNRNP25-206ENST00000481947 SAMD9Q5K651 1589 aa19.09■□□□□ 0.65
SNRNP25-206ENST00000481947 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
SNRNP25-206ENST00000481947 EFCAB5A4FU69 1503 aa19.08■□□□□ 0.64
SNRNP25-206ENST00000481947 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
SNRNP25-206ENST00000481947 SHROOM2Q13796 1616 aa19.05■□□□□ 0.64
SNRNP25-206ENST00000481947 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
SNRNP25-206ENST00000481947 DISP1Q96F81 1524 aa19■□□□□ 0.63
SNRNP25-206ENST00000481947 KIAA0556O60303 1618 aa19■□□□□ 0.63
SNRNP25-206ENST00000481947 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
SNRNP25-206ENST00000481947 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
SNRNP25-206ENST00000481947 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
SNRNP25-206ENST00000481947 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
SNRNP25-206ENST00000481947 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
SNRNP25-206ENST00000481947 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
SNRNP25-206ENST00000481947 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
SNRNP25-206ENST00000481947 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
SNRNP25-206ENST00000481947 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
SNRNP25-206ENST00000481947 PCF11O94913 1555 aaKnown RBP18.85■□□□□ 0.61
SNRNP25-206ENST00000481947 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
SNRNP25-206ENST00000481947 FYCO1Q9BQS8 1478 aa18.79■□□□□ 0.6
SNRNP25-206ENST00000481947 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
SNRNP25-206ENST00000481947 PTPRGP23470 1445 aa18.76■□□□□ 0.59
SNRNP25-206ENST00000481947 LRRIQ1Q96JM4 1722 aa18.76■□□□□ 0.59
SNRNP25-206ENST00000481947 ABCA8O94911 1581 aa18.76■□□□□ 0.59
SNRNP25-206ENST00000481947 HECW1Q76N89 1606 aa18.75■□□□□ 0.59
SNRNP25-206ENST00000481947 PLB1Q6P1J6 1458 aa18.73■□□□□ 0.59
SNRNP25-206ENST00000481947 ARHGEF11O15085 1522 aa18.73■□□□□ 0.59
SNRNP25-206ENST00000481947 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
SNRNP25-206ENST00000481947 CFAP43Q8NDM7 1665 aa18.72■□□□□ 0.59
SNRNP25-206ENST00000481947 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
SNRNP25-206ENST00000481947 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
SNRNP25-206ENST00000481947 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
SNRNP25-206ENST00000481947 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
SNRNP25-206ENST00000481947 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
SNRNP25-206ENST00000481947 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
SNRNP25-206ENST00000481947 UACAQ9BZF9 1416 aa18.67■□□□□ 0.58
SNRNP25-206ENST00000481947 CCDC18Q5T9S5 1454 aa18.66■□□□□ 0.58
SNRNP25-206ENST00000481947 EPRSP07814 1512 aaKnown RBP18.66■□□□□ 0.58
SNRNP25-206ENST00000481947 ABCC2Q92887 1545 aa18.65■□□□□ 0.58
SNRNP25-206ENST00000481947 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
SNRNP25-206ENST00000481947 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
SNRNP25-206ENST00000481947 APLP2Q06481 763 aa18.63■□□□□ 0.57
SNRNP25-206ENST00000481947 CDK13Q14004 1512 aaKnown RBP18.63■□□□□ 0.57
SNRNP25-206ENST00000481947 ADCY10Q96PN6 1610 aa18.61■□□□□ 0.57
SNRNP25-206ENST00000481947 ATP10BO94823 1461 aa18.58■□□□□ 0.57
SNRNP25-206ENST00000481947 LRRC9Q6ZRR7 1453 aa18.58■□□□□ 0.56
SNRNP25-206ENST00000481947 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
SNRNP25-206ENST00000481947 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
SNRNP25-206ENST00000481947 ZCCHC11Q5TAX3 1644 aaKnown RBP18.56■□□□□ 0.56
SNRNP25-206ENST00000481947 KDM5BQ9UGL1 1544 aa18.55■□□□□ 0.56
SNRNP25-206ENST00000481947 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
SNRNP25-206ENST00000481947 ARID3CA6NKF2 412 aa18.54■□□□□ 0.56
SNRNP25-206ENST00000481947 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
SNRNP25-206ENST00000481947 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
SNRNP25-206ENST00000481947 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
SNRNP25-206ENST00000481947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
SNRNP25-206ENST00000481947 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
SNRNP25-206ENST00000481947 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
SNRNP25-206ENST00000481947 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
SNRNP25-206ENST00000481947 CDK11AQ9UQ88 783 aaPredicted RBP18.46■□□□□ 0.55
SNRNP25-206ENST00000481947 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
SNRNP25-206ENST00000481947 KIF14Q15058 1648 aa18.41■□□□□ 0.54
SNRNP25-206ENST00000481947 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
SNRNP25-206ENST00000481947 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
SNRNP25-206ENST00000481947 PHLDB1Q86UU1 1377 aa18.38■□□□□ 0.53
SNRNP25-206ENST00000481947 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNRNP25-206ENST00000481947 ASXL2Q76L83 1435 aa18.37■□□□□ 0.53
SNRNP25-206ENST00000481947 WDR7Q9Y4E6 1490 aa18.37■□□□□ 0.53
SNRNP25-206ENST00000481947 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
SNRNP25-206ENST00000481947 ABCC10Q5T3U5 1492 aa18.35■□□□□ 0.53
SNRNP25-206ENST00000481947 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
SNRNP25-206ENST00000481947 TTC37Q6PGP7 1564 aa18.32■□□□□ 0.52
SNRNP25-206ENST00000481947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNRNP25-206ENST00000481947 CDC42BPAQ5VT25 1732 aa18.32■□□□□ 0.52
SNRNP25-206ENST00000481947 RRBP1Q9P2E9 1410 aaKnown RBP18.32■□□□□ 0.52
SNRNP25-206ENST00000481947 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
SNRNP25-206ENST00000481947 TRIM26Q12899 539 aaPredicted RBP18.31■□□□□ 0.52
SNRNP25-206ENST00000481947 FGD6Q6ZV73 1430 aa18.29■□□□□ 0.52
SNRNP25-206ENST00000481947 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
SNRNP25-206ENST00000481947 ABCA9Q8IUA7 1624 aa18.28■□□□□ 0.52
SNRNP25-206ENST00000481947 GPATCH8Q9UKJ3 1502 aaKnown RBP18.28■□□□□ 0.52
SNRNP25-206ENST00000481947 PREX2Q70Z35 1606 aa18.27■□□□□ 0.51
SNRNP25-206ENST00000481947 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
SNRNP25-206ENST00000481947 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
SNRNP25-206ENST00000481947 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
SNRNP25-206ENST00000481947 MIA2Q96PC5 1412 aa18.25■□□□□ 0.51
SNRNP25-206ENST00000481947 PTPN23Q9H3S7 1636 aa18.24■□□□□ 0.51
SNRNP25-206ENST00000481947 TCOF1Q13428 1488 aaKnown RBP18.23■□□□□ 0.51
SNRNP25-206ENST00000481947 GLI2P10070 1586 aa18.21■□□□□ 0.51
SNRNP25-206ENST00000481947 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
SNRNP25-206ENST00000481947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNRNP25-206ENST00000481947 ARAP3Q8WWN8 1544 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms