RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
SMIM11A-205ENST00000481710 ERCC6L2Q5T890 1561 aa29.47■■■□□ 2.31
SMIM11A-205ENST00000481710 CTTNBP2Q8WZ74 1663 aa29.47■■■□□ 2.31
SMIM11A-205ENST00000481710 KIAA0586Q9BVV6 1533 aa29.45■■■□□ 2.31
SMIM11A-205ENST00000481710 ARAP1Q96P48 1450 aa29.43■■■□□ 2.3
SMIM11A-205ENST00000481710 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
SMIM11A-205ENST00000481710 IQGAP2Q13576 1575 aa29.4■■■□□ 2.3
SMIM11A-205ENST00000481710 FAM9AQ8IZU1 332 aaPredicted RBP29.4■■■□□ 2.3
SMIM11A-205ENST00000481710 KIF21BO75037 1637 aa29.34■■■□□ 2.29
SMIM11A-205ENST00000481710 PRG4Q92954 1404 aaPredicted RBP29.32■■■□□ 2.28
SMIM11A-205ENST00000481710 JPH4Q96JJ6 628 aa29.31■■■□□ 2.28
SMIM11A-205ENST00000481710 CYB5RLQ6IPT4 315 aa29.23■■■□□ 2.27
SMIM11A-205ENST00000481710 UGGT2Q9NYU1 1516 aa29.21■■■□□ 2.27
SMIM11A-205ENST00000481710 DISP1Q96F81 1524 aa29.15■■■□□ 2.26
SMIM11A-205ENST00000481710 KIAA0556O60303 1618 aa29.14■■■□□ 2.26
SMIM11A-205ENST00000481710 GOLGA3Q08378 1498 aa29.1■■■□□ 2.25
SMIM11A-205ENST00000481710 CARMIL2Q6F5E8 1435 aa29.1■■■□□ 2.25
SMIM11A-205ENST00000481710 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
SMIM11A-205ENST00000481710 SAMD9Q5K651 1589 aa29.01■■■□□ 2.24
SMIM11A-205ENST00000481710 TNIKQ9UKE5 1360 aa29■■■□□ 2.23
SMIM11A-205ENST00000481710 ADCY10Q96PN6 1610 aa28.98■■■□□ 2.23
SMIM11A-205ENST00000481710 PTPRGP23470 1445 aa28.94■■■□□ 2.22
SMIM11A-205ENST00000481710 TTBK1Q5TCY1 1321 aaPredicted RBP28.92■■■□□ 2.22
SMIM11A-205ENST00000481710 UBTFP17480 764 aaKnown RBP28.9■■■□□ 2.22
SMIM11A-205ENST00000481710 EFCAB5A4FU69 1503 aa28.86■■■□□ 2.21
SMIM11A-205ENST00000481710 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
SMIM11A-205ENST00000481710 ABCC2Q92887 1545 aa28.81■■■□□ 2.2
SMIM11A-205ENST00000481710 P3H3Q8IVL6 736 aa28.8■■■□□ 2.2
SMIM11A-205ENST00000481710 UACAQ9BZF9 1416 aa28.79■■■□□ 2.2
SMIM11A-205ENST00000481710 ABCA8O94911 1581 aa28.79■■■□□ 2.2
SMIM11A-205ENST00000481710 UHRF1BP1LA0JNW5 1464 aa28.78■■■□□ 2.2
SMIM11A-205ENST00000481710 FHOD3Q2V2M9 1422 aa28.77■■■□□ 2.2
SMIM11A-205ENST00000481710 PLB1Q6P1J6 1458 aa28.77■■■□□ 2.2
SMIM11A-205ENST00000481710 ARHGAP35Q9NRY4 1499 aa28.73■■■□□ 2.19
SMIM11A-205ENST00000481710 ZCCHC11Q5TAX3 1644 aaKnown RBP28.72■■■□□ 2.19
SMIM11A-205ENST00000481710 MAPKBP1O60336 1514 aa28.7■■■□□ 2.19
SMIM11A-205ENST00000481710 RAPGEF6Q8TEU7 1601 aa28.69■■■□□ 2.18
SMIM11A-205ENST00000481710 KIF13AQ9H1H9 1805 aa28.66■■■□□ 2.18
SMIM11A-205ENST00000481710 KDM5BQ9UGL1 1544 aa28.66■■■□□ 2.18
SMIM11A-205ENST00000481710 NPM1P06748 294 aaKnown RBP eCLIP28.63■■■□□ 2.17
SMIM11A-205ENST00000481710 TRHP20396 242 aaPredicted RBP28.57■■■□□ 2.16
SMIM11A-205ENST00000481710 DIP2BQ9P265 1576 aa28.57■■■□□ 2.16
SMIM11A-205ENST00000481710 CLIP1P30622 1438 aa28.56■■■□□ 2.16
SMIM11A-205ENST00000481710 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
SMIM11A-205ENST00000481710 NUP153P49790 1475 aaKnown RBP28.53■■■□□ 2.16
SMIM11A-205ENST00000481710 ASXL2Q76L83 1435 aa28.52■■■□□ 2.16
SMIM11A-205ENST00000481710 ABCC10Q5T3U5 1492 aa28.51■■■□□ 2.15
SMIM11A-205ENST00000481710 FMN1Q68DA7 1419 aa28.51■■■□□ 2.15
SMIM11A-205ENST00000481710 CEP162Q5TB80 1403 aa28.5■■■□□ 2.15
SMIM11A-205ENST00000481710 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
SMIM11A-205ENST00000481710 HECW1Q76N89 1606 aa28.47■■■□□ 2.15
SMIM11A-205ENST00000481710 ATP10BO94823 1461 aa28.47■■■□□ 2.15
SMIM11A-205ENST00000481710 PCF11O94913 1555 aaKnown RBP28.47■■■□□ 2.15
SMIM11A-205ENST00000481710 ARID3CA6NKF2 412 aa28.45■■■□□ 2.14
SMIM11A-205ENST00000481710 WDR7Q9Y4E6 1490 aa28.43■■■□□ 2.14
SMIM11A-205ENST00000481710 CDK13Q14004 1512 aaKnown RBP28.39■■■□□ 2.14
SMIM11A-205ENST00000481710 TSPOAP1O95153 1857 aa28.39■■■□□ 2.14
SMIM11A-205ENST00000481710 GLI2P10070 1586 aa28.39■■■□□ 2.14
SMIM11A-205ENST00000481710 EPRSP07814 1512 aaKnown RBP28.38■■■□□ 2.13
SMIM11A-205ENST00000481710 FAM69CQ0P6D2 419 aa28.36■■■□□ 2.13
SMIM11A-205ENST00000481710 MAP3K4Q9Y6R4 1608 aa28.33■■■□□ 2.13
SMIM11A-205ENST00000481710 CASKIN1Q8WXD9 1431 aa28.33■■■□□ 2.13
SMIM11A-205ENST00000481710 FYCO1Q9BQS8 1478 aa28.32■■■□□ 2.12
SMIM11A-205ENST00000481710 PPRC1Q5VV67 1664 aaKnown RBP28.32■■■□□ 2.12
SMIM11A-205ENST00000481710 ATP1B4Q9UN42 357 aaPredicted RBP28.28■■■□□ 2.12
SMIM11A-205ENST00000481710 CFAP43Q8NDM7 1665 aa28.28■■■□□ 2.12
SMIM11A-205ENST00000481710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.27■■■□□ 2.12
SMIM11A-205ENST00000481710 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
SMIM11A-205ENST00000481710 ABCA9Q8IUA7 1624 aa28.23■■■□□ 2.11
SMIM11A-205ENST00000481710 CCDC18Q5T9S5 1454 aa28.22■■■□□ 2.11
SMIM11A-205ENST00000481710 KCNH8Q96L42 1107 aa28.21■■■□□ 2.11
SMIM11A-205ENST00000481710 VPS8Q8N3P4 1428 aa28.14■■■□□ 2.1
SMIM11A-205ENST00000481710 TTC37Q6PGP7 1564 aa28.14■■■□□ 2.1
SMIM11A-205ENST00000481710 KIF14Q15058 1648 aa28.14■■■□□ 2.09
SMIM11A-205ENST00000481710 MAGI3Q5TCQ9 1506 aa28.13■■■□□ 2.09
SMIM11A-205ENST00000481710 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
SMIM11A-205ENST00000481710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.12■■■□□ 2.09
SMIM11A-205ENST00000481710 CD109Q6YHK3 1445 aa28.09■■■□□ 2.09
SMIM11A-205ENST00000481710 TROQ12816 1431 aaPredicted RBP28.08■■■□□ 2.09
SMIM11A-205ENST00000481710 TEX14Q8IWB6 1497 aa28.06■■■□□ 2.08
SMIM11A-205ENST00000481710 KDM6BO15054 1643 aa28.05■■■□□ 2.08
SMIM11A-205ENST00000481710 CDK11AQ9UQ88 783 aaPredicted RBP28.04■■■□□ 2.08
SMIM11A-205ENST00000481710 MYO5CQ9NQX4 1742 aa28.04■■■□□ 2.08
SMIM11A-205ENST00000481710 TIAM1Q13009 1591 aa28■■■□□ 2.07
SMIM11A-205ENST00000481710 EHBP1L1Q8N3D4 1523 aa27.95■■■□□ 2.06
SMIM11A-205ENST00000481710 CDC42BPAQ5VT25 1732 aa27.94■■■□□ 2.06
SMIM11A-205ENST00000481710 CFAP74Q9C0B2 1584 aa27.94■■■□□ 2.06
SMIM11A-205ENST00000481710 CDC42BPBQ9Y5S2 1711 aa27.92■■■□□ 2.06
SMIM11A-205ENST00000481710 PREX2Q70Z35 1606 aa27.92■■■□□ 2.06
SMIM11A-205ENST00000481710 COL17A1Q9UMD9 1497 aaPredicted RBP27.9■■■□□ 2.06
SMIM11A-205ENST00000481710 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.06
SMIM11A-205ENST00000481710 NEO1Q92859 1461 aa27.88■■■□□ 2.05
SMIM11A-205ENST00000481710 MAP3K1Q13233 1512 aa27.87■■■□□ 2.05
SMIM11A-205ENST00000481710 ARAP3Q8WWN8 1544 aa27.87■■■□□ 2.05
SMIM11A-205ENST00000481710 FANCAO15360 1455 aa27.86■■■□□ 2.05
SMIM11A-205ENST00000481710 PLCH2O75038 1416 aa27.85■■■□□ 2.05
SMIM11A-205ENST00000481710 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
SMIM11A-205ENST00000481710 LRRC9Q6ZRR7 1453 aa27.82■■■□□ 2.04
SMIM11A-205ENST00000481710 ARHGAP5Q13017 1502 aa27.82■■■□□ 2.04
SMIM11A-205ENST00000481710 FRMPD1Q5SYB0 1578 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms