RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 PRG4Q92954 1404 aaPredicted RBP38.43■■■■□ 3.74
GPCPD1-206ENST00000481690 JPH4Q96JJ6 628 aa38.38■■■■□ 3.73
GPCPD1-206ENST00000481690 KIAA0586Q9BVV6 1533 aa38.27■■■■□ 3.72
GPCPD1-206ENST00000481690 CARMIL1Q5VZK9 1371 aa38.26■■■■□ 3.72
GPCPD1-206ENST00000481690 IQGAP2Q13576 1575 aa38.02■■■■□ 3.68
GPCPD1-206ENST00000481690 ADCY10Q96PN6 1610 aa37.99■■■■□ 3.67
GPCPD1-206ENST00000481690 RAPGEF2Q9Y4G8 1499 aa37.97■■■■□ 3.67
GPCPD1-206ENST00000481690 KIF13AQ9H1H9 1805 aa37.96■■■■□ 3.67
GPCPD1-206ENST00000481690 NPM1P06748 294 aaKnown RBP eCLIP37.91■■■■□ 3.66
GPCPD1-206ENST00000481690 CARMIL2Q6F5E8 1435 aa37.9■■■■□ 3.66
GPCPD1-206ENST00000481690 TTBK1Q5TCY1 1321 aaPredicted RBP37.87■■■■□ 3.65
GPCPD1-206ENST00000481690 PTPRGP23470 1445 aa37.86■■■■□ 3.65
GPCPD1-206ENST00000481690 MAPKBP1O60336 1514 aa37.84■■■■□ 3.65
GPCPD1-206ENST00000481690 TNIKQ9UKE5 1360 aa37.81■■■■□ 3.64
GPCPD1-206ENST00000481690 CTTNBP2Q8WZ74 1663 aa37.77■■■■□ 3.64
GPCPD1-206ENST00000481690 DISP1Q96F81 1524 aa37.76■■■■□ 3.63
GPCPD1-206ENST00000481690 ABCC10Q5T3U5 1492 aa37.74■■■■□ 3.63
GPCPD1-206ENST00000481690 UGGT2Q9NYU1 1516 aa37.73■■■■□ 3.63
GPCPD1-206ENST00000481690 DIP2BQ9P265 1576 aa37.72■■■■□ 3.63
GPCPD1-206ENST00000481690 FAM69CQ0P6D2 419 aa37.7■■■■□ 3.63
GPCPD1-206ENST00000481690 KIAA0556O60303 1618 aa37.67■■■■□ 3.62
GPCPD1-206ENST00000481690 PRXQ9BXM0 1461 aa37.63■■■■□ 3.61
GPCPD1-206ENST00000481690 ABCC2Q92887 1545 aa37.62■■■■□ 3.61
GPCPD1-206ENST00000481690 UACAQ9BZF9 1416 aa37.58■■■■□ 3.61
GPCPD1-206ENST00000481690 UHRF1BP1LA0JNW5 1464 aa37.57■■■■□ 3.6
GPCPD1-206ENST00000481690 TSPOAP1O95153 1857 aa37.55■■■■□ 3.6
GPCPD1-206ENST00000481690 GOLGA3Q08378 1498 aa37.47■■■■□ 3.59
GPCPD1-206ENST00000481690 ASXL2Q76L83 1435 aa37.46■■■■□ 3.59
GPCPD1-206ENST00000481690 PLB1Q6P1J6 1458 aa37.43■■■■□ 3.58
GPCPD1-206ENST00000481690 ZCCHC11Q5TAX3 1644 aaKnown RBP37.43■■■■□ 3.58
GPCPD1-206ENST00000481690 CSRNP3Q8WYN3 585 aa37.41■■■■□ 3.58
GPCPD1-206ENST00000481690 KDM5BQ9UGL1 1544 aa37.4■■■■□ 3.58
GPCPD1-206ENST00000481690 EEA1Q15075 1411 aa37.35■■■■□ 3.57
GPCPD1-206ENST00000481690 KDM6BO15054 1643 aa37.34■■■■□ 3.57
GPCPD1-206ENST00000481690 GLI2P10070 1586 aa37.32■■■■□ 3.56
GPCPD1-206ENST00000481690 ABCA8O94911 1581 aa37.27■■■■□ 3.56
GPCPD1-206ENST00000481690 AEBP2Q6ZN18 517 aaPredicted RBP37.26■■■■□ 3.56
GPCPD1-206ENST00000481690 PPRC1Q5VV67 1664 aaKnown RBP37.25■■■■□ 3.55
GPCPD1-206ENST00000481690 FAM9AQ8IZU1 332 aaPredicted RBP37.24■■■■□ 3.55
GPCPD1-206ENST00000481690 EPRSP07814 1512 aaKnown RBP37.24■■■■□ 3.55
GPCPD1-206ENST00000481690 P3H3Q8IVL6 736 aa37.19■■■■□ 3.54
GPCPD1-206ENST00000481690 MAP3K4Q9Y6R4 1608 aa37.18■■■■□ 3.54
GPCPD1-206ENST00000481690 WDR7Q9Y4E6 1490 aa37.17■■■■□ 3.54
GPCPD1-206ENST00000481690 SAMD9Q5K651 1589 aa37.16■■■■□ 3.54
GPCPD1-206ENST00000481690 KIF21BO75037 1637 aa37.08■■■■□ 3.53
GPCPD1-206ENST00000481690 RANGAP1P46060 587 aaPredicted RBP37.07■■■■□ 3.52
GPCPD1-206ENST00000481690 TEX14Q8IWB6 1497 aa37.03■■■■□ 3.52
GPCPD1-206ENST00000481690 ARID3CA6NKF2 412 aa37.01■■■■□ 3.52
GPCPD1-206ENST00000481690 CHIC1Q5VXU3 224 aa37■■■■□ 3.51
GPCPD1-206ENST00000481690 RAPGEF6Q8TEU7 1601 aa36.99■■■■□ 3.51
GPCPD1-206ENST00000481690 KCNH8Q96L42 1107 aa36.98■■■■□ 3.51
GPCPD1-206ENST00000481690 CFAP43Q8NDM7 1665 aa36.98■■■■□ 3.51
GPCPD1-206ENST00000481690 ATP10BO94823 1461 aa36.93■■■■□ 3.5
GPCPD1-206ENST00000481690 FHOD3Q2V2M9 1422 aa36.93■■■■□ 3.5
GPCPD1-206ENST00000481690 CD109Q6YHK3 1445 aa36.89■■■■□ 3.5
GPCPD1-206ENST00000481690 EHMT2Q96KQ7 1210 aa36.88■■■■□ 3.49
GPCPD1-206ENST00000481690 COL17A1Q9UMD9 1497 aaPredicted RBP36.88■■■■□ 3.49
GPCPD1-206ENST00000481690 EFCAB5A4FU69 1503 aa36.85■■■■□ 3.49
GPCPD1-206ENST00000481690 MAGI3Q5TCQ9 1506 aa36.83■■■■□ 3.49
GPCPD1-206ENST00000481690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.8■■■■□ 3.48
GPCPD1-206ENST00000481690 HNRNPUL2Q1KMD3 747 aaKnown RBP36.8■■■■□ 3.48
GPCPD1-206ENST00000481690 NUP153P49790 1475 aaKnown RBP36.79■■■■□ 3.48
GPCPD1-206ENST00000481690 UBTFP17480 764 aaKnown RBP36.77■■■■□ 3.48
GPCPD1-206ENST00000481690 ABCA9Q8IUA7 1624 aa36.73■■■■□ 3.47
GPCPD1-206ENST00000481690 KDM4FA0A1W2PPD8 638 aa36.7■■■■□ 3.47
GPCPD1-206ENST00000481690 ADGRL1O94910 1474 aa36.57■■■■□ 3.45
GPCPD1-206ENST00000481690 ARHGAP35Q9NRY4 1499 aa36.55■■■■□ 3.44
GPCPD1-206ENST00000481690 PLEKHD1A6NEE1 506 aa36.54■■■■□ 3.44
GPCPD1-206ENST00000481690 ARAP3Q8WWN8 1544 aa36.53■■■■□ 3.44
GPCPD1-206ENST00000481690 CDK13Q14004 1512 aaKnown RBP36.51■■■■□ 3.44
GPCPD1-206ENST00000481690 FMN1Q68DA7 1419 aa36.5■■■■□ 3.43
GPCPD1-206ENST00000481690 HECW1Q76N89 1606 aa36.48■■■■□ 3.43
GPCPD1-206ENST00000481690 NEO1Q92859 1461 aa36.45■■■■□ 3.43
GPCPD1-206ENST00000481690 PHLDB1Q86UU1 1377 aa36.45■■■■□ 3.43
GPCPD1-206ENST00000481690 ATP1B4Q9UN42 357 aaPredicted RBP36.45■■■■□ 3.43
GPCPD1-206ENST00000481690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.42■■■■□ 3.422e-7■■■■□ 20.8
GPCPD1-206ENST00000481690 TTC37Q6PGP7 1564 aa36.4■■■■□ 3.42
GPCPD1-206ENST00000481690 CFAP74Q9C0B2 1584 aa36.35■■■■□ 3.41
GPCPD1-206ENST00000481690 RAPGEF3O95398 923 aa36.34■■■■□ 3.41
GPCPD1-206ENST00000481690 FRMPD1Q5SYB0 1578 aa36.32■■■■□ 3.4
GPCPD1-206ENST00000481690 FANCAO15360 1455 aa36.3■■■■□ 3.4
GPCPD1-206ENST00000481690 LRRIQ1Q96JM4 1722 aa36.29■■■■□ 3.4
GPCPD1-206ENST00000481690 AKNAQ7Z591 1439 aa36.25■■■■□ 3.39
GPCPD1-206ENST00000481690 RICTORQ6R327 1708 aa36.23■■■■□ 3.39
GPCPD1-206ENST00000481690 CDK11AQ9UQ88 783 aaPredicted RBP36.22■■■■□ 3.39
GPCPD1-206ENST00000481690 DENND4BO75064 1496 aaPredicted RBP36.22■■■■□ 3.39
GPCPD1-206ENST00000481690 PCF11O94913 1555 aaKnown RBP36.22■■■■□ 3.39
GPCPD1-206ENST00000481690 MYO5CQ9NQX4 1742 aa36.2■■■■□ 3.39
GPCPD1-206ENST00000481690 KIF14Q15058 1648 aa36.19■■■■□ 3.38
GPCPD1-206ENST00000481690 PLCH2O75038 1416 aa36.14■■■■□ 3.38
GPCPD1-206ENST00000481690 TROQ12816 1431 aaPredicted RBP36.14■■■■□ 3.38
GPCPD1-206ENST00000481690 ARHGEF40Q8TER5 1519 aa36.13■■■■□ 3.37
GPCPD1-206ENST00000481690 CLIP1P30622 1438 aa36.12■■■■□ 3.37
GPCPD1-206ENST00000481690 CASKIN1Q8WXD9 1431 aa36.12■■■■□ 3.37
GPCPD1-206ENST00000481690 CCDC18Q5T9S5 1454 aa36.09■■■■□ 3.37
GPCPD1-206ENST00000481690 ZMYM4Q5VZL5 1548 aa36.05■■■■□ 3.36
GPCPD1-206ENST00000481690 ARID4BQ4LE39 1312 aaPredicted RBP36.04■■■■□ 3.36
GPCPD1-206ENST00000481690 ADAMTSL3P82987 1691 aa36.03■■■■□ 3.36
GPCPD1-206ENST00000481690 BCORL1Q5H9F3 1711 aa36.03■■■■□ 3.36
GPCPD1-206ENST00000481690 SCAPERQ9BY12 1400 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms