RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-211ENST00000481492 SHROOM2Q13796 1616 aa35.05■■■■□ 3.2
PTPN18-211ENST00000481492 JPH4Q96JJ6 628 aa35.03■■■■□ 3.2
PTPN18-211ENST00000481492 PRG4Q92954 1404 aaPredicted RBP34.94■■■■□ 3.18
PTPN18-211ENST00000481492 KIAA0586Q9BVV6 1533 aa34.93■■■■□ 3.18
PTPN18-211ENST00000481492 RAPGEF2Q9Y4G8 1499 aa34.84■■■■□ 3.17
PTPN18-211ENST00000481492 CHIC1Q5VXU3 224 aa34.73■■■■□ 3.15
PTPN18-211ENST00000481492 PRXQ9BXM0 1461 aa34.71■■■■□ 3.15
PTPN18-211ENST00000481492 CSRNP3Q8WYN3 585 aa34.65■■■■□ 3.14
PTPN18-211ENST00000481492 IQGAP2Q13576 1575 aa34.64■■■■□ 3.14
PTPN18-211ENST00000481492 FAM9AQ8IZU1 332 aaPredicted RBP34.52■■■■□ 3.12
PTPN18-211ENST00000481492 DISP1Q96F81 1524 aa34.52■■■■□ 3.12
PTPN18-211ENST00000481492 EEA1Q15075 1411 aa34.51■■■■□ 3.12
PTPN18-211ENST00000481492 CARMIL2Q6F5E8 1435 aa34.51■■■■□ 3.11
PTPN18-211ENST00000481492 UGGT2Q9NYU1 1516 aa34.5■■■■□ 3.11
PTPN18-211ENST00000481492 PTPRGP23470 1445 aa34.48■■■■□ 3.11
PTPN18-211ENST00000481492 TNIKQ9UKE5 1360 aa34.47■■■■□ 3.11
PTPN18-211ENST00000481492 TTBK1Q5TCY1 1321 aaPredicted RBP34.45■■■■□ 3.11
PTPN18-211ENST00000481492 AEBP2Q6ZN18 517 aaPredicted RBP34.41■■■■□ 3.1
PTPN18-211ENST00000481492 CTTNBP2Q8WZ74 1663 aa34.41■■■■□ 3.1
PTPN18-211ENST00000481492 ADCY10Q96PN6 1610 aa34.41■■■■□ 3.1
PTPN18-211ENST00000481492 KIAA0556O60303 1618 aa34.33■■■■□ 3.09
PTPN18-211ENST00000481492 NPM1P06748 294 aaKnown RBP eCLIP34.29■■■■□ 3.08
PTPN18-211ENST00000481492 UACAQ9BZF9 1416 aa34.23■■■■□ 3.07
PTPN18-211ENST00000481492 GOLGA3Q08378 1498 aa34.22■■■■□ 3.07
PTPN18-211ENST00000481492 UHRF1BP1LA0JNW5 1464 aa34.2■■■■□ 3.07
PTPN18-211ENST00000481492 MAPKBP1O60336 1514 aa34.2■■■■□ 3.06
PTPN18-211ENST00000481492 KIF21BO75037 1637 aa34.19■■■■□ 3.06
PTPN18-211ENST00000481492 ABCC2Q92887 1545 aa34.17■■■■□ 3.06
PTPN18-211ENST00000481492 P3H3Q8IVL6 736 aa34.15■■■■□ 3.06
PTPN18-211ENST00000481492 ABCC10Q5T3U5 1492 aa34.11■■■■□ 3.05
PTPN18-211ENST00000481492 PLB1Q6P1J6 1458 aa34.11■■■■□ 3.05
PTPN18-211ENST00000481492 EHMT2Q96KQ7 1210 aa34.11■■■■□ 3.05
PTPN18-211ENST00000481492 KIF13AQ9H1H9 1805 aa34.09■■■■□ 3.05
PTPN18-211ENST00000481492 FAM69CQ0P6D2 419 aa34.09■■■■□ 3.05
PTPN18-211ENST00000481492 RANGAP1P46060 587 aaPredicted RBP34.06■■■■□ 3.04
PTPN18-211ENST00000481492 KDM5BQ9UGL1 1544 aa34.06■■■■□ 3.04
PTPN18-211ENST00000481492 SAMD9Q5K651 1589 aa34.04■■■■□ 3.04
PTPN18-211ENST00000481492 ABCA8O94911 1581 aa34.02■■■■□ 3.04
PTPN18-211ENST00000481492 DIP2BQ9P265 1576 aa34.01■■■■□ 3.04
PTPN18-211ENST00000481492 ASXL2Q76L83 1435 aa34.01■■■■□ 3.03
PTPN18-211ENST00000481492 UBTFP17480 764 aaKnown RBP33.98■■■■□ 3.03
PTPN18-211ENST00000481492 ZCCHC11Q5TAX3 1644 aaKnown RBP33.93■■■■□ 3.02
PTPN18-211ENST00000481492 FHOD3Q2V2M9 1422 aa33.89■■■■□ 3.02
PTPN18-211ENST00000481492 ARID3CA6NKF2 412 aa33.82■■■■□ 3
PTPN18-211ENST00000481492 EPRSP07814 1512 aaKnown RBP33.8■■■■□ 3
PTPN18-211ENST00000481492 EFCAB5A4FU69 1503 aa33.79■■■■□ 3
PTPN18-211ENST00000481492 ATP10BO94823 1461 aa33.79■■■■□ 3
PTPN18-211ENST00000481492 GLI2P10070 1586 aa33.79■■■■□ 3
PTPN18-211ENST00000481492 WDR7Q9Y4E6 1490 aa33.76■■■■□ 3
PTPN18-211ENST00000481492 RAPGEF6Q8TEU7 1601 aa33.74■■■□□ 2.99
PTPN18-211ENST00000481492 ARHGAP35Q9NRY4 1499 aa33.73■■■□□ 2.99
PTPN18-211ENST00000481492 NUP153P49790 1475 aaKnown RBP33.7■■■□□ 2.99
PTPN18-211ENST00000481492 TSPOAP1O95153 1857 aa33.7■■■□□ 2.99
PTPN18-211ENST00000481492 KCNH8Q96L42 1107 aa33.69■■■□□ 2.98
PTPN18-211ENST00000481492 PPRC1Q5VV67 1664 aaKnown RBP33.64■■■□□ 2.98
PTPN18-211ENST00000481492 MAP3K4Q9Y6R4 1608 aa33.61■■■□□ 2.97
PTPN18-211ENST00000481492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.56■■■□□ 2.96
PTPN18-211ENST00000481492 HNRNPUL2Q1KMD3 747 aaKnown RBP33.56■■■□□ 2.96
PTPN18-211ENST00000481492 KDM4FA0A1W2PPD8 638 aa33.51■■■□□ 2.96
PTPN18-211ENST00000481492 FMN1Q68DA7 1419 aa33.51■■■□□ 2.95
PTPN18-211ENST00000481492 CD109Q6YHK3 1445 aa33.51■■■□□ 2.95
PTPN18-211ENST00000481492 KDM6BO15054 1643 aa33.48■■■□□ 2.95
PTPN18-211ENST00000481492 COL17A1Q9UMD9 1497 aaPredicted RBP33.47■■■□□ 2.95
PTPN18-211ENST00000481492 CDK13Q14004 1512 aaKnown RBP33.44■■■□□ 2.94
PTPN18-211ENST00000481492 MAGI3Q5TCQ9 1506 aa33.43■■■□□ 2.94
PTPN18-211ENST00000481492 CFAP43Q8NDM7 1665 aa33.43■■■□□ 2.94
PTPN18-211ENST00000481492 PLEKHD1A6NEE1 506 aa33.43■■■□□ 2.94
PTPN18-211ENST00000481492 ATP1B4Q9UN42 357 aaPredicted RBP33.42■■■□□ 2.94
PTPN18-211ENST00000481492 TEX14Q8IWB6 1497 aa33.42■■■□□ 2.94
PTPN18-211ENST00000481492 CLIP1P30622 1438 aa33.41■■■□□ 2.94
PTPN18-211ENST00000481492 ABCA9Q8IUA7 1624 aa33.37■■■□□ 2.93
PTPN18-211ENST00000481492 LOC105371045A0A1W2PR82 267 aa33.36■■■□□ 2.93
PTPN18-211ENST00000481492 HECW1Q76N89 1606 aa33.33■■■□□ 2.93
PTPN18-211ENST00000481492 CASKIN1Q8WXD9 1431 aa33.29■■■□□ 2.92
PTPN18-211ENST00000481492 LRRIQ1Q96JM4 1722 aa33.25■■■□□ 2.91
PTPN18-211ENST00000481492 PCF11O94913 1555 aaKnown RBP33.25■■■□□ 2.91
PTPN18-211ENST00000481492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.23■■■□□ 2.91
PTPN18-211ENST00000481492 CEP162Q5TB80 1403 aa33.21■■■□□ 2.91
PTPN18-211ENST00000481492 CDK11AQ9UQ88 783 aaPredicted RBP33.18■■■□□ 2.9
PTPN18-211ENST00000481492 ARAP3Q8WWN8 1544 aa33.17■■■□□ 2.9
PTPN18-211ENST00000481492 TTC37Q6PGP7 1564 aa33.16■■■□□ 2.9
PTPN18-211ENST00000481492 ILDR1Q86SU0 546 aaPredicted RBP33.16■■■□□ 2.9
PTPN18-211ENST00000481492 TROQ12816 1431 aaPredicted RBP33.14■■■□□ 2.9
PTPN18-211ENST00000481492 FYCO1Q9BQS8 1478 aa33.14■■■□□ 2.9
PTPN18-211ENST00000481492 PHLDB1Q86UU1 1377 aa33.13■■■□□ 2.89
PTPN18-211ENST00000481492 NEO1Q92859 1461 aa33.13■■■□□ 2.89
PTPN18-211ENST00000481492 CCDC18Q5T9S5 1454 aa33.1■■■□□ 2.89
PTPN18-211ENST00000481492 RAPGEF3O95398 923 aa33.08■■■□□ 2.89
PTPN18-211ENST00000481492 KIF14Q15058 1648 aa33.07■■■□□ 2.89
PTPN18-211ENST00000481492 PLCH2O75038 1416 aa33.05■■■□□ 2.88
PTPN18-211ENST00000481492 FANCAO15360 1455 aa33.03■■■□□ 2.88
PTPN18-211ENST00000481492 AKNAQ7Z591 1439 aa33.03■■■□□ 2.88
PTPN18-211ENST00000481492 ADGRL1O94910 1474 aa32.98■■■□□ 2.87
PTPN18-211ENST00000481492 FRMPD1Q5SYB0 1578 aa32.95■■■□□ 2.86
PTPN18-211ENST00000481492 EFCAB2Q5VUJ9 269 aa32.92■■■□□ 2.86
PTPN18-211ENST00000481492 DENND4BO75064 1496 aaPredicted RBP32.91■■■□□ 2.86
PTPN18-211ENST00000481492 CFAP74Q9C0B2 1584 aa32.89■■■□□ 2.86
PTPN18-211ENST00000481492 MYO5CQ9NQX4 1742 aa32.88■■■□□ 2.85
PTPN18-211ENST00000481492 SCAPERQ9BY12 1400 aa32.85■■■□□ 2.85
PTPN18-211ENST00000481492 RICTORQ6R327 1708 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms