RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 EIF4G2P78344 907 aaKnown RBP eCLIP15.61■□□□□ 0.09
DDX39B-219ENST00000481456 PPP4R2Q9NY27 417 aa15.6■□□□□ 0.09
DDX39B-219ENST00000481456 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
DDX39B-219ENST00000481456 DHX57Q6P158 1386 aaKnown RBP15.59■□□□□ 0.09
DDX39B-219ENST00000481456 SETD5Q9C0A6 1442 aa15.57■□□□□ 0.08
DDX39B-219ENST00000481456 KANK4Q5T7N3 995 aaPredicted RBP15.56■□□□□ 0.08
DDX39B-219ENST00000481456 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
DDX39B-219ENST00000481456 CHIC2Q9UKJ5 165 aa15.53■□□□□ 0.08
DDX39B-219ENST00000481456 RAB3GAP2Q9H2M9 1393 aa15.52■□□□□ 0.08
DDX39B-219ENST00000481456 TMC1Q8TDI8 760 aa15.51■□□□□ 0.07
DDX39B-219ENST00000481456 NOP58Q9Y2X3 529 aaKnown RBP15.5■□□□□ 0.07
DDX39B-219ENST00000481456 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
DDX39B-219ENST00000481456 RAPGEF2Q9Y4G8 1499 aa15.48■□□□□ 0.07
DDX39B-219ENST00000481456 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
DDX39B-219ENST00000481456 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
DDX39B-219ENST00000481456 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
DDX39B-219ENST00000481456 RRP7BPQ9NSQ0 103 aa15.44■□□□□ 0.06
DDX39B-219ENST00000481456 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
DDX39B-219ENST00000481456 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
DDX39B-219ENST00000481456 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
DDX39B-219ENST00000481456 DEKP35659 375 aaKnown RBP15.42■□□□□ 0.06
DDX39B-219ENST00000481456 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
DDX39B-219ENST00000481456 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
DDX39B-219ENST00000481456 ZNF777Q9ULD5 760 aaPredicted RBP15.39■□□□□ 0.05
DDX39B-219ENST00000481456 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
DDX39B-219ENST00000481456 DDRGK1Q96HY6 314 aa15.39■□□□□ 0.05
DDX39B-219ENST00000481456 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
DDX39B-219ENST00000481456 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
DDX39B-219ENST00000481456 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
DDX39B-219ENST00000481456 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
DDX39B-219ENST00000481456 KIF21BO75037 1637 aa15.35■□□□□ 0.05
DDX39B-219ENST00000481456 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
DDX39B-219ENST00000481456 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.04
DDX39B-219ENST00000481456 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.04
DDX39B-219ENST00000481456 CUX2O14529 1486 aa15.33■□□□□ 0.04
DDX39B-219ENST00000481456 FANCIQ9NVI1 1328 aa15.31■□□□□ 0.04
DDX39B-219ENST00000481456 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
DDX39B-219ENST00000481456 NEFMP07197 916 aa15.28■□□□□ 0.04
DDX39B-219ENST00000481456 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
DDX39B-219ENST00000481456 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
DDX39B-219ENST00000481456 GLIPR1L2Q4G1C9 344 aa15.24■□□□□ 0.03
DDX39B-219ENST00000481456 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.038e-58■□□□□ 9.7
DDX39B-219ENST00000481456 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
DDX39B-219ENST00000481456 SENP3-EIF4A1A0A087X0R7 540 aa15.21■□□□□ 0.03
DDX39B-219ENST00000481456 FBLN2P98095 1184 aa15.19■□□□□ 0.02
DDX39B-219ENST00000481456 IPO9Q96P70 1041 aaKnown RBP15.19■□□□□ 0.02
DDX39B-219ENST00000481456 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
DDX39B-219ENST00000481456 FMN1Q68DA7 1419 aa15.19■□□□□ 0.02
DDX39B-219ENST00000481456 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
DDX39B-219ENST00000481456 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
DDX39B-219ENST00000481456 TSPY4P0CV99 314 aa15.16■□□□□ 0.02
DDX39B-219ENST00000481456 TSPY10P0CW01 314 aa15.16■□□□□ 0.02
DDX39B-219ENST00000481456 BECN1Q14457 450 aa15.16■□□□□ 0.02
DDX39B-219ENST00000481456 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
DDX39B-219ENST00000481456 ERICH3Q5RHP9 1530 aa15.15■□□□□ 0.02
DDX39B-219ENST00000481456 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
DDX39B-219ENST00000481456 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
DDX39B-219ENST00000481456 ANP32BQ92688 251 aaKnown RBP15.13■□□□□ 0.01
DDX39B-219ENST00000481456 ZBED9Q6R2W3 1325 aa15.12■□□□□ 0.01
DDX39B-219ENST00000481456 MPHOSPH9Q99550 1183 aa15.11■□□□□ 0.01
DDX39B-219ENST00000481456 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
DDX39B-219ENST00000481456 CCDC18Q5T9S5 1454 aa15.11■□□□□ 0.01
DDX39B-219ENST00000481456 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
DDX39B-219ENST00000481456 CFDP1Q9UEE9 299 aaPredicted RBP15.09■□□□□ 0.01
DDX39B-219ENST00000481456 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0
DDX39B-219ENST00000481456 ARXQ96QS3 562 aa15.08■□□□□ 0
DDX39B-219ENST00000481456 PRKRIP1Q9H875 184 aaPredicted RBP15.08■□□□□ 0
DDX39B-219ENST00000481456 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
DDX39B-219ENST00000481456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 01e-15■□□□□ 10.6
DDX39B-219ENST00000481456 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
DDX39B-219ENST00000481456 FOXD1Q16676 465 aa15.06■□□□□ 0
DDX39B-219ENST00000481456 RCAN3Q9UKA8 241 aa15.06■□□□□ 0
DDX39B-219ENST00000481456 PHLDB1Q86UU1 1377 aa15.05■□□□□ 0
DDX39B-219ENST00000481456 RALBP1Q15311 655 aa15.03■□□□□ -0
DDX39B-219ENST00000481456 USP35Q9P2H5 1018 aa15.03■□□□□ -0
DDX39B-219ENST00000481456 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
DDX39B-219ENST00000481456 RGS3P49796 1198 aa15.02□□□□□ -0.01
DDX39B-219ENST00000481456 KNSTRNQ9Y448 316 aa15.02□□□□□ -0.01
DDX39B-219ENST00000481456 UACAQ9BZF9 1416 aa15.01□□□□□ -0.01
DDX39B-219ENST00000481456 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
DDX39B-219ENST00000481456 KTN1Q86UP2 1357 aaKnown RBP15□□□□□ -0.01
DDX39B-219ENST00000481456 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
DDX39B-219ENST00000481456 RGL3Q3MIN7 710 aa14.99□□□□□ -0.01
DDX39B-219ENST00000481456 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
DDX39B-219ENST00000481456 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
DDX39B-219ENST00000481456 CDCA8Q53HL2 280 aa14.99□□□□□ -0.01
DDX39B-219ENST00000481456 CC2D1BQ5T0F9 858 aaKnown RBP14.99□□□□□ -0.01
DDX39B-219ENST00000481456 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
DDX39B-219ENST00000481456 FGD6Q6ZV73 1430 aa14.98□□□□□ -0.01
DDX39B-219ENST00000481456 PLEKHD1A6NEE1 506 aa14.97□□□□□ -0.01
DDX39B-219ENST00000481456 IGF1RP08069 1367 aa14.97□□□□□ -0.01
DDX39B-219ENST00000481456 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
DDX39B-219ENST00000481456 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
DDX39B-219ENST00000481456 PKD2Q13563 968 aa14.95□□□□□ -0.02
DDX39B-219ENST00000481456 TRIM44Q96DX7 344 aaPredicted RBP14.95□□□□□ -0.02
DDX39B-219ENST00000481456 CCDC7Q96M83 1385 aa14.95□□□□□ -0.02
DDX39B-219ENST00000481456 WASHC2AQ641Q2 1341 aa14.94□□□□□ -0.02
DDX39B-219ENST00000481456 L1TD1Q5T7N2 865 aaKnown RBP14.94□□□□□ -0.02
DDX39B-219ENST00000481456 KIF15Q9NS87 1388 aa14.93□□□□□ -0.02
DDX39B-219ENST00000481456 TIAM1Q13009 1591 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms