RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 NPM2Q86SE8 214 aaKnown RBP6.22□□□□□ -1.41
GPCPD1-205ENST00000481038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.22□□□□□ -1.41
GPCPD1-205ENST00000481038 HNRNPUL2Q1KMD3 747 aaKnown RBP6.22□□□□□ -1.41
GPCPD1-205ENST00000481038 PTMSP20962 102 aa6.22□□□□□ -1.41
GPCPD1-205ENST00000481038 CNGB1Q14028 1251 aaPredicted RBP6.21□□□□□ -1.41
GPCPD1-205ENST00000481038 TPRNQ4KMQ1 711 aa6.21□□□□□ -1.41
GPCPD1-205ENST00000481038 CCDC88BA6NC98 1476 aa6.21□□□□□ -1.42
GPCPD1-205ENST00000481038 ANP32BQ92688 251 aaKnown RBP6.2□□□□□ -1.42
GPCPD1-205ENST00000481038 ANO8Q9HCE9 1232 aaPredicted RBP6.2□□□□□ -1.42
GPCPD1-205ENST00000481038 HSP90AA1P07900 732 aaKnown RBP6.2□□□□□ -1.42
GPCPD1-205ENST00000481038 FBLN2P98095 1184 aa6.2□□□□□ -1.42
GPCPD1-205ENST00000481038 CEP164Q9UPV0 1460 aa6.2□□□□□ -1.42
GPCPD1-205ENST00000481038 UBE2Q2Q8WVN8 375 aa6.2□□□□□ -1.42
GPCPD1-205ENST00000481038 SLC4A1APQ9BWU0 796 aaKnown RBP6.19□□□□□ -1.42
GPCPD1-205ENST00000481038 BICRAQ9NZM4 1560 aa6.19□□□□□ -1.42
GPCPD1-205ENST00000481038 NPM1P06748 294 aaKnown RBP eCLIP6.19□□□□□ -1.42
GPCPD1-205ENST00000481038 PLEKHG5O94827 1062 aa6.18□□□□□ -1.42
GPCPD1-205ENST00000481038 CHMP7Q8WUX9 453 aaPredicted RBP6.18□□□□□ -1.42
GPCPD1-205ENST00000481038 ZBTB47Q9UFB7 747 aaPredicted RBP6.18□□□□□ -1.42
GPCPD1-205ENST00000481038 WIZO95785 1651 aa6.17□□□□□ -1.42
GPCPD1-205ENST00000481038 NEFMP07197 916 aa6.17□□□□□ -1.42
GPCPD1-205ENST00000481038 PDIA4P13667 645 aaKnown RBP6.16□□□□□ -1.42
GPCPD1-205ENST00000481038 APPP05067 770 aa6.16□□□□□ -1.42
GPCPD1-205ENST00000481038 GOLGA3Q08378 1498 aa6.16□□□□□ -1.42
GPCPD1-205ENST00000481038 RSPH6AQ9H0K4 717 aa6.16□□□□□ -1.42
GPCPD1-205ENST00000481038 PEG3Q9GZU2 1588 aa6.16□□□□□ -1.42
GPCPD1-205ENST00000481038 CC2D2AQ9P2K1 1620 aa6.15□□□□□ -1.42
GPCPD1-205ENST00000481038 HSP90AA2PQ14568 343 aaPredicted RBP6.14□□□□□ -1.43
GPCPD1-205ENST00000481038 FANCD2Q9BXW9 1451 aa6.14□□□□□ -1.43
GPCPD1-205ENST00000481038 FKBP8Q14318 412 aa6.13□□□□□ -1.43
GPCPD1-205ENST00000481038 SOGA1O94964 1423 aa6.12□□□□□ -1.43
GPCPD1-205ENST00000481038 LAMC3Q9Y6N6 1575 aa6.12□□□□□ -1.43
GPCPD1-205ENST00000481038 PLPPR3Q6T4P5 718 aa6.11□□□□□ -1.43
GPCPD1-205ENST00000481038 UNC13AQ9UPW8 1703 aa6.11□□□□□ -1.43
GPCPD1-205ENST00000481038 CFTRP13569 1480 aa6.11□□□□□ -1.43
GPCPD1-205ENST00000481038 CUX2O14529 1486 aa6.11□□□□□ -1.43
GPCPD1-205ENST00000481038 ZBTB7CA1YPR0 619 aa6.1□□□□□ -1.43
GPCPD1-205ENST00000481038 CANXP27824 592 aaKnown RBP6.1□□□□□ -1.43
GPCPD1-205ENST00000481038 CARMIL2Q6F5E8 1435 aa6.1□□□□□ -1.43
GPCPD1-205ENST00000481038 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
GPCPD1-205ENST00000481038 CALRP27797 417 aaKnown RBP6.09□□□□□ -1.43
GPCPD1-205ENST00000481038 TAOK2Q9UL54 1235 aa6.09□□□□□ -1.43
GPCPD1-205ENST00000481038 TNNT3P45378 269 aaPredicted RBP6.09□□□□□ -1.44
GPCPD1-205ENST00000481038 TNIKQ9UKE5 1360 aa6.09□□□□□ -1.44
GPCPD1-205ENST00000481038 FHAD1B1AJZ9 1412 aa6.08□□□□□ -1.44
GPCPD1-205ENST00000481038 CARMIL1Q5VZK9 1371 aa6.08□□□□□ -1.44
GPCPD1-205ENST00000481038 MRC2Q9UBG0 1479 aa6.08□□□□□ -1.44
GPCPD1-205ENST00000481038 SALL2Q9Y467 1007 aaPredicted RBP6.08□□□□□ -1.44
GPCPD1-205ENST00000481038 ARID4BQ4LE39 1312 aaPredicted RBP6.07□□□□□ -1.44
GPCPD1-205ENST00000481038 HSP90B1P14625 803 aaKnown RBP6.07□□□□□ -1.44
GPCPD1-205ENST00000481038 HMGB1P1B2RPK0 211 aaPredicted RBP6.07□□□□□ -1.44
GPCPD1-205ENST00000481038 CLIP1P30622 1438 aa6.07□□□□□ -1.44
GPCPD1-205ENST00000481038 TIMELESSQ9UNS1 1208 aa6.07□□□□□ -1.44
GPCPD1-205ENST00000481038 NOP58Q9Y2X3 529 aaKnown RBP6.06□□□□□ -1.44
GPCPD1-205ENST00000481038 DNTTIP2Q5QJE6 756 aaKnown RBP6.05□□□□□ -1.44
GPCPD1-205ENST00000481038 IFT140Q96RY7 1462 aa6.05□□□□□ -1.44
GPCPD1-205ENST00000481038 CCDC9Q9Y3X0 531 aaKnown RBP6.05□□□□□ -1.44
GPCPD1-205ENST00000481038 PPM1GO15355 546 aaPredicted RBP6.05□□□□□ -1.44
GPCPD1-205ENST00000481038 LOC105371045A0A1W2PR82 267 aa6.05□□□□□ -1.44
GPCPD1-205ENST00000481038 RAPGEF2Q9Y4G8 1499 aa6.03□□□□□ -1.44
GPCPD1-205ENST00000481038 PATL2C9JE40 543 aaKnown RBP6.03□□□□□ -1.44
GPCPD1-205ENST00000481038 PLEKHD1A6NEE1 506 aa6.03□□□□□ -1.44
GPCPD1-205ENST00000481038 MTUS2Q5JR59 1369 aa6.02□□□□□ -1.45
GPCPD1-205ENST00000481038 PNNQ9H307 717 aaKnown RBP6.02□□□□□ -1.45
GPCPD1-205ENST00000481038 DNMBPQ6XZF7 1577 aa6.02□□□□□ -1.45
GPCPD1-205ENST00000481038 FMN1Q68DA7 1419 aa6.02□□□□□ -1.45
GPCPD1-205ENST00000481038 FAM50AQ14320 339 aaKnown RBP6.02□□□□□ -1.45
GPCPD1-205ENST00000481038 GRIN2BQ13224 1484 aa6□□□□□ -1.45
GPCPD1-205ENST00000481038 FGD5Q6ZNL6 1462 aa6□□□□□ -1.45
GPCPD1-205ENST00000481038 GAPVD1Q14C86 1478 aa6□□□□□ -1.45
GPCPD1-205ENST00000481038 LAS1LQ9Y4W2 734 aaKnown RBP6□□□□□ -1.45
GPCPD1-205ENST00000481038 PAXIP1Q6ZW49 1069 aaPredicted RBP6□□□□□ -1.45
GPCPD1-205ENST00000481038 DDRGK1Q96HY6 314 aa6□□□□□ -1.45
GPCPD1-205ENST00000481038 ESF1Q9H501 851 aaKnown RBP5.99□□□□□ -1.45
GPCPD1-205ENST00000481038 CEP162Q5TB80 1403 aa5.99□□□□□ -1.45
GPCPD1-205ENST00000481038 ZNF526Q8TF50 670 aaPredicted RBP5.99□□□□□ -1.45
GPCPD1-205ENST00000481038 RBM19Q9Y4C8 960 aaKnown RBP5.99□□□□□ -1.45
GPCPD1-205ENST00000481038 KLHL34Q8N239 644 aa5.99□□□□□ -1.45
GPCPD1-205ENST00000481038 ITGAEP38570 1179 aa5.99□□□□□ -1.45
GPCPD1-205ENST00000481038 P3H3Q8IVL6 736 aa5.99□□□□□ -1.45
GPCPD1-205ENST00000481038 TSHZ2Q9NRE2 1034 aa5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 USP35Q9P2H5 1018 aa5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 TSPY4P0CV99 314 aa5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 TSPY10P0CW01 314 aa5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 L1TD1Q5T7N2 865 aaKnown RBP5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 TDRD9Q8NDG6 1382 aaKnown RBP5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 TOP2BQ02880 1626 aa5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 SUPT16HQ9Y5B9 1047 aaKnown RBP5.98□□□□□ -1.45
GPCPD1-205ENST00000481038 TOPBP1Q92547 1522 aa5.97□□□□□ -1.45
GPCPD1-205ENST00000481038 BRD2P25440 801 aaKnown RBP5.97□□□□□ -1.45
GPCPD1-205ENST00000481038 BCL11BQ9C0K0 894 aaPredicted RBP5.97□□□□□ -1.45
GPCPD1-205ENST00000481038 OSCARQ8IYS5 282 aa5.96□□□□□ -1.45
GPCPD1-205ENST00000481038 PTMAP06454 111 aaKnown RBP5.96□□□□□ -1.45
GPCPD1-205ENST00000481038 ERICH3Q5RHP9 1530 aa5.96□□□□□ -1.46
GPCPD1-205ENST00000481038 ARID3AQ99856 593 aa5.96□□□□□ -1.46
GPCPD1-205ENST00000481038 TRIM52Q96A61 297 aa5.95□□□□□ -1.46
GPCPD1-205ENST00000481038 ZMYND15Q9H091 742 aa5.95□□□□□ -1.46
GPCPD1-205ENST00000481038 ANP32CO43423 234 aa5.94□□□□□ -1.46
GPCPD1-205ENST00000481038 WDR97A6NE52 1622 aa5.94□□□□□ -1.46
GPCPD1-205ENST00000481038 ABCA10Q8WWZ4 1543 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms