RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
COL4A2-206ENST00000480609 CEP162Q5TB80 1403 aa21.21■□□□□ 0.99
COL4A2-206ENST00000480609 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
COL4A2-206ENST00000480609 UGGT2Q9NYU1 1516 aa21.19■□□□□ 0.98
COL4A2-206ENST00000480609 FBLN2P98095 1184 aa21.18■□□□□ 0.98
COL4A2-206ENST00000480609 EFCAB5A4FU69 1503 aa21.17■□□□□ 0.98
COL4A2-206ENST00000480609 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
COL4A2-206ENST00000480609 CLIP1P30622 1438 aa21.15■□□□□ 0.98
COL4A2-206ENST00000480609 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
COL4A2-206ENST00000480609 SAMD9Q5K651 1589 aa21.12■□□□□ 0.97
COL4A2-206ENST00000480609 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
COL4A2-206ENST00000480609 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
COL4A2-206ENST00000480609 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
COL4A2-206ENST00000480609 JPH4Q96JJ6 628 aa21.08■□□□□ 0.97
COL4A2-206ENST00000480609 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
COL4A2-206ENST00000480609 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
COL4A2-206ENST00000480609 CARMIL2Q6F5E8 1435 aa21.01■□□□□ 0.95
COL4A2-206ENST00000480609 KIAA0556O60303 1618 aa21■□□□□ 0.95
COL4A2-206ENST00000480609 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
COL4A2-206ENST00000480609 PRG4Q92954 1404 aaPredicted RBP20.95■□□□□ 0.95
COL4A2-206ENST00000480609 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
COL4A2-206ENST00000480609 FHOD3Q2V2M9 1422 aa20.91■□□□□ 0.94
COL4A2-206ENST00000480609 CASKIN1Q8WXD9 1431 aa20.86■□□□□ 0.93
COL4A2-206ENST00000480609 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
COL4A2-206ENST00000480609 FYCO1Q9BQS8 1478 aa20.83■□□□□ 0.93
COL4A2-206ENST00000480609 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
COL4A2-206ENST00000480609 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
COL4A2-206ENST00000480609 PTPRGP23470 1445 aa20.8■□□□□ 0.92
COL4A2-206ENST00000480609 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
COL4A2-206ENST00000480609 ABCA8O94911 1581 aa20.77■□□□□ 0.92
COL4A2-206ENST00000480609 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
COL4A2-206ENST00000480609 UHRF1BP1LA0JNW5 1464 aa20.75■□□□□ 0.91
COL4A2-206ENST00000480609 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
COL4A2-206ENST00000480609 RAPGEF6Q8TEU7 1601 aa20.73■□□□□ 0.91
COL4A2-206ENST00000480609 UACAQ9BZF9 1416 aa20.72■□□□□ 0.91
COL4A2-206ENST00000480609 HECW1Q76N89 1606 aa20.72■□□□□ 0.91
COL4A2-206ENST00000480609 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.9
COL4A2-206ENST00000480609 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
COL4A2-206ENST00000480609 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
COL4A2-206ENST00000480609 ABCC2Q92887 1545 aa20.68■□□□□ 0.9
COL4A2-206ENST00000480609 EPRSP07814 1512 aaKnown RBP20.66■□□□□ 0.9
COL4A2-206ENST00000480609 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
COL4A2-206ENST00000480609 CFAP43Q8NDM7 1665 aa20.63■□□□□ 0.89
COL4A2-206ENST00000480609 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
COL4A2-206ENST00000480609 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
COL4A2-206ENST00000480609 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
COL4A2-206ENST00000480609 KDM5BQ9UGL1 1544 aa20.61■□□□□ 0.89
COL4A2-206ENST00000480609 APLP2Q06481 763 aa20.6■□□□□ 0.89
COL4A2-206ENST00000480609 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.89
COL4A2-206ENST00000480609 ATP10BO94823 1461 aa20.58■□□□□ 0.89
COL4A2-206ENST00000480609 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
COL4A2-206ENST00000480609 ADCY10Q96PN6 1610 aa20.55■□□□□ 0.88
COL4A2-206ENST00000480609 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.88
COL4A2-206ENST00000480609 CDK13Q14004 1512 aaKnown RBP20.52■□□□□ 0.87
COL4A2-206ENST00000480609 EHBP1L1Q8N3D4 1523 aa20.51■□□□□ 0.87
COL4A2-206ENST00000480609 TTBK1Q5TCY1 1321 aaPredicted RBP20.5■□□□□ 0.87
COL4A2-206ENST00000480609 TROQ12816 1431 aaPredicted RBP20.48■□□□□ 0.87
COL4A2-206ENST00000480609 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
COL4A2-206ENST00000480609 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
COL4A2-206ENST00000480609 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
COL4A2-206ENST00000480609 MAGI3Q5TCQ9 1506 aa20.47■□□□□ 0.87
COL4A2-206ENST00000480609 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
COL4A2-206ENST00000480609 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.87
COL4A2-206ENST00000480609 PLEKHD1A6NEE1 506 aa20.43■□□□□ 0.86
COL4A2-206ENST00000480609 CYB5RLQ6IPT4 315 aa20.41■□□□□ 0.86
COL4A2-206ENST00000480609 MAPKBP1O60336 1514 aa20.39■□□□□ 0.85
COL4A2-206ENST00000480609 SUPT6HQ7KZ85 1726 aaKnown RBP20.39■□□□□ 0.85
COL4A2-206ENST00000480609 NPM1P06748 294 aaKnown RBP eCLIP20.37■□□□□ 0.85
COL4A2-206ENST00000480609 NCOA2Q15596 1464 aa20.37■□□□□ 0.85
COL4A2-206ENST00000480609 WDR7Q9Y4E6 1490 aa20.37■□□□□ 0.85
COL4A2-206ENST00000480609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.35■□□□□ 0.85
COL4A2-206ENST00000480609 HNRNPUL2Q1KMD3 747 aaKnown RBP20.35■□□□□ 0.85
COL4A2-206ENST00000480609 ABCC10Q5T3U5 1492 aa20.35■□□□□ 0.85
COL4A2-206ENST00000480609 ASXL2Q76L83 1435 aa20.34■□□□□ 0.85
COL4A2-206ENST00000480609 KIF14Q15058 1648 aa20.32■□□□□ 0.84
COL4A2-206ENST00000480609 ARID3CA6NKF2 412 aa20.32■□□□□ 0.84
COL4A2-206ENST00000480609 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
COL4A2-206ENST00000480609 PHLDB1Q86UU1 1377 aa20.31■□□□□ 0.84
COL4A2-206ENST00000480609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.3■□□□□ 0.84
COL4A2-206ENST00000480609 MYOM3Q5VTT5 1437 aa20.29■□□□□ 0.84
COL4A2-206ENST00000480609 MIA2Q96PC5 1412 aa20.29■□□□□ 0.84
COL4A2-206ENST00000480609 ARAP3Q8WWN8 1544 aa20.27■□□□□ 0.83
COL4A2-206ENST00000480609 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
COL4A2-206ENST00000480609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.83
COL4A2-206ENST00000480609 GPATCH8Q9UKJ3 1502 aaKnown RBP20.25■□□□□ 0.83
COL4A2-206ENST00000480609 ABCA9Q8IUA7 1624 aa20.24■□□□□ 0.83
COL4A2-206ENST00000480609 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
COL4A2-206ENST00000480609 GLI2P10070 1586 aa20.24■□□□□ 0.83
COL4A2-206ENST00000480609 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
COL4A2-206ENST00000480609 FGD6Q6ZV73 1430 aa20.23■□□□□ 0.83
COL4A2-206ENST00000480609 TCOF1Q13428 1488 aaKnown RBP20.22■□□□□ 0.83
COL4A2-206ENST00000480609 ITSN2Q9NZM3 1697 aa20.21■□□□□ 0.83
COL4A2-206ENST00000480609 PLCH2O75038 1416 aa20.19■□□□□ 0.82
COL4A2-206ENST00000480609 TTC37Q6PGP7 1564 aa20.18■□□□□ 0.82
COL4A2-206ENST00000480609 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
COL4A2-206ENST00000480609 CDC42BPAQ5VT25 1732 aa20.17■□□□□ 0.82
COL4A2-206ENST00000480609 DIP2BQ9P265 1576 aa20.14■□□□□ 0.81
COL4A2-206ENST00000480609 MYO5CQ9NQX4 1742 aa20.13■□□□□ 0.81
COL4A2-206ENST00000480609 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
COL4A2-206ENST00000480609 CFDP1Q9UEE9 299 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms