RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 RIMBP3CA6NJZ7 1639 aa8.55□□□□□ -1.04
HDAC6-223ENST00000480525 RIMBP3BA6NNM3 1639 aa8.55□□□□□ -1.04
HDAC6-223ENST00000480525 RIMBP3Q9UFD9 1639 aa8.55□□□□□ -1.04
HDAC6-223ENST00000480525 IQGAP2Q13576 1575 aa8.55□□□□□ -1.04
HDAC6-223ENST00000480525 UGGT2Q9NYU1 1516 aa8.54□□□□□ -1.04
HDAC6-223ENST00000480525 CSRNP3Q8WYN3 585 aa8.52□□□□□ -1.05
HDAC6-223ENST00000480525 FBLN2P98095 1184 aa8.5□□□□□ -1.05
HDAC6-223ENST00000480525 GOLGA3Q08378 1498 aa8.49□□□□□ -1.05
HDAC6-223ENST00000480525 ARAP1Q96P48 1450 aa8.48□□□□□ -1.05
HDAC6-223ENST00000480525 CARMIL2Q6F5E8 1435 aa8.47□□□□□ -1.05
HDAC6-223ENST00000480525 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
HDAC6-223ENST00000480525 EFCAB5A4FU69 1503 aa8.47□□□□□ -1.05
HDAC6-223ENST00000480525 SAMD9Q5K651 1589 aa8.47□□□□□ -1.05
HDAC6-223ENST00000480525 KIAA0556O60303 1618 aa8.47□□□□□ -1.05
HDAC6-223ENST00000480525 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-223ENST00000480525 DISP1Q96F81 1524 aa8.45□□□□□ -1.06
HDAC6-223ENST00000480525 UHRF1BP1LA0JNW5 1464 aa8.45□□□□□ -1.06
HDAC6-223ENST00000480525 TNIKQ9UKE5 1360 aa8.42□□□□□ -1.06
HDAC6-223ENST00000480525 ERCC6L2Q5T890 1561 aa8.42□□□□□ -1.06
HDAC6-223ENST00000480525 MAPKBP1O60336 1514 aa8.4□□□□□ -1.06
HDAC6-223ENST00000480525 ABCC2Q92887 1545 aa8.39□□□□□ -1.07
HDAC6-223ENST00000480525 ADCY10Q96PN6 1610 aa8.38□□□□□ -1.07
HDAC6-223ENST00000480525 PTPRGP23470 1445 aa8.37□□□□□ -1.07
HDAC6-223ENST00000480525 ABCA8O94911 1581 aa8.37□□□□□ -1.07
HDAC6-223ENST00000480525 KDM5BQ9UGL1 1544 aa8.37□□□□□ -1.07
HDAC6-223ENST00000480525 UACAQ9BZF9 1416 aa8.36□□□□□ -1.07
HDAC6-223ENST00000480525 FAM9AQ8IZU1 332 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-223ENST00000480525 FMN1Q68DA7 1419 aa8.34□□□□□ -1.07
HDAC6-223ENST00000480525 RAPGEF6Q8TEU7 1601 aa8.32□□□□□ -1.08
HDAC6-223ENST00000480525 CYB5RLQ6IPT4 315 aa8.32□□□□□ -1.08
HDAC6-223ENST00000480525 PLB1Q6P1J6 1458 aa8.32□□□□□ -1.08
HDAC6-223ENST00000480525 ARHGAP35Q9NRY4 1499 aa8.32□□□□□ -1.08
HDAC6-223ENST00000480525 GLI2P10070 1586 aa8.31□□□□□ -1.08
HDAC6-223ENST00000480525 KIF13AQ9H1H9 1805 aa8.31□□□□□ -1.08
HDAC6-223ENST00000480525 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
HDAC6-223ENST00000480525 HECW1Q76N89 1606 aa8.29□□□□□ -1.08
HDAC6-223ENST00000480525 ABCC10Q5T3U5 1492 aa8.29□□□□□ -1.08
HDAC6-223ENST00000480525 DIP2BQ9P265 1576 aa8.28□□□□□ -1.08
HDAC6-223ENST00000480525 NUP153P49790 1475 aaKnown RBP8.27□□□□□ -1.09
HDAC6-223ENST00000480525 FYCO1Q9BQS8 1478 aa8.27□□□□□ -1.09
HDAC6-223ENST00000480525 UBTFP17480 764 aaKnown RBP8.27□□□□□ -1.09
HDAC6-223ENST00000480525 CLIP1P30622 1438 aa8.27□□□□□ -1.09
HDAC6-223ENST00000480525 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
HDAC6-223ENST00000480525 CCDC18Q5T9S5 1454 aa8.26□□□□□ -1.09
HDAC6-223ENST00000480525 WDR7Q9Y4E6 1490 aa8.26□□□□□ -1.09
HDAC6-223ENST00000480525 NPM1P06748 294 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDAC6-223ENST00000480525 CASKIN1Q8WXD9 1431 aa8.26□□□□□ -1.09
HDAC6-223ENST00000480525 FHOD3Q2V2M9 1422 aa8.25□□□□□ -1.09
HDAC6-223ENST00000480525 MAP3K4Q9Y6R4 1608 aa8.25□□□□□ -1.09
HDAC6-223ENST00000480525 MAP3K1Q13233 1512 aa8.24□□□□□ -1.09
HDAC6-223ENST00000480525 CEP162Q5TB80 1403 aa8.24□□□□□ -1.09
HDAC6-223ENST00000480525 ASXL2Q76L83 1435 aa8.24□□□□□ -1.09
HDAC6-223ENST00000480525 ABCA9Q8IUA7 1624 aa8.24□□□□□ -1.09
HDAC6-223ENST00000480525 ATP10BO94823 1461 aa8.24□□□□□ -1.09
HDAC6-223ENST00000480525 ARAP3Q8WWN8 1544 aa8.24□□□□□ -1.09
HDAC6-223ENST00000480525 EPRSP07814 1512 aaKnown RBP8.23□□□□□ -1.09
HDAC6-223ENST00000480525 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
HDAC6-223ENST00000480525 PHLDB1Q86UU1 1377 aa8.22□□□□□ -1.09
HDAC6-223ENST00000480525 LRRIQ1Q96JM4 1722 aa8.21□□□□□ -1.09
HDAC6-223ENST00000480525 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.1
HDAC6-223ENST00000480525 VPS8Q8N3P4 1428 aa8.2□□□□□ -1.1
HDAC6-223ENST00000480525 TEX14Q8IWB6 1497 aa8.19□□□□□ -1.1
HDAC6-223ENST00000480525 PPRC1Q5VV67 1664 aaKnown RBP8.19□□□□□ -1.1
HDAC6-223ENST00000480525 CDK11AQ9UQ88 783 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-223ENST00000480525 CFAP74Q9C0B2 1584 aa8.18□□□□□ -1.1
HDAC6-223ENST00000480525 TROQ12816 1431 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-223ENST00000480525 KIF14Q15058 1648 aa8.17□□□□□ -1.1
HDAC6-223ENST00000480525 NEO1Q92859 1461 aa8.16□□□□□ -1.1
HDAC6-223ENST00000480525 MYO5CQ9NQX4 1742 aa8.15□□□□□ -1.1
HDAC6-223ENST00000480525 EHBP1L1Q8N3D4 1523 aa8.15□□□□□ -1.1
HDAC6-223ENST00000480525 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
HDAC6-223ENST00000480525 CDK13Q14004 1512 aaKnown RBP8.14□□□□□ -1.11
HDAC6-223ENST00000480525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC6-223ENST00000480525 PLEKHD1A6NEE1 506 aa8.14□□□□□ -1.11
HDAC6-223ENST00000480525 P3H3Q8IVL6 736 aa8.13□□□□□ -1.11
HDAC6-223ENST00000480525 PREX2Q70Z35 1606 aa8.13□□□□□ -1.11
HDAC6-223ENST00000480525 CD109Q6YHK3 1445 aa8.12□□□□□ -1.11
HDAC6-223ENST00000480525 ITSN2Q9NZM3 1697 aa8.12□□□□□ -1.11
HDAC6-223ENST00000480525 TTC37Q6PGP7 1564 aa8.12□□□□□ -1.11
HDAC6-223ENST00000480525 PLCH2O75038 1416 aa8.12□□□□□ -1.11
HDAC6-223ENST00000480525 FAM69CQ0P6D2 419 aa8.11□□□□□ -1.11
HDAC6-223ENST00000480525 CDC42BPAQ5VT25 1732 aa8.11□□□□□ -1.11
HDAC6-223ENST00000480525 SUPT6HQ7KZ85 1726 aaKnown RBP8.11□□□□□ -1.11
HDAC6-223ENST00000480525 TSPOAP1O95153 1857 aa8.11□□□□□ -1.11
HDAC6-223ENST00000480525 CDC42BPBQ9Y5S2 1711 aa8.1□□□□□ -1.11
HDAC6-223ENST00000480525 KDM6BO15054 1643 aa8.1□□□□□ -1.11
HDAC6-223ENST00000480525 TRHP20396 242 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-223ENST00000480525 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
HDAC6-223ENST00000480525 LRRC9Q6ZRR7 1453 aa8.08□□□□□ -1.12
HDAC6-223ENST00000480525 LOC105371045A0A1W2PR82 267 aa8.08□□□□□ -1.12
HDAC6-223ENST00000480525 RICTORQ6R327 1708 aa8.08□□□□□ -1.12
HDAC6-223ENST00000480525 FANCAO15360 1455 aa8.07□□□□□ -1.12
HDAC6-223ENST00000480525 MAGI2Q86UL8 1455 aa8.07□□□□□ -1.12
HDAC6-223ENST00000480525 PLEKHH2Q8IVE3 1493 aa8.07□□□□□ -1.12
HDAC6-223ENST00000480525 KDM5CP41229 1560 aa8.06□□□□□ -1.12
HDAC6-223ENST00000480525 KIAA1107Q9UPP5 1409 aa8.06□□□□□ -1.12
HDAC6-223ENST00000480525 MTUS2Q5JR59 1369 aa8.06□□□□□ -1.12
HDAC6-223ENST00000480525 TTBK1Q5TCY1 1321 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-223ENST00000480525 MIA2Q96PC5 1412 aa8.05□□□□□ -1.12
HDAC6-223ENST00000480525 ABCC1P33527 1531 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms