RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-208ENST00000480340 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
DENND4B-208ENST00000480340 CLIP1P30622 1438 aa22.11■■□□□ 1.13
DENND4B-208ENST00000480340 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
DENND4B-208ENST00000480340 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
DENND4B-208ENST00000480340 FBLN2P98095 1184 aa22.06■■□□□ 1.12
DENND4B-208ENST00000480340 SYNJ2O15056 1496 aa22.05■■□□□ 1.12
DENND4B-208ENST00000480340 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
DENND4B-208ENST00000480340 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
DENND4B-208ENST00000480340 CHD1O14646 1710 aa21.96■■□□□ 1.11
DENND4B-208ENST00000480340 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
DENND4B-208ENST00000480340 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
DENND4B-208ENST00000480340 IQGAP2Q13576 1575 aa21.92■■□□□ 1.1
DENND4B-208ENST00000480340 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
DENND4B-208ENST00000480340 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
DENND4B-208ENST00000480340 KIAA0586Q9BVV6 1533 aa21.88■■□□□ 1.09
DENND4B-208ENST00000480340 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
DENND4B-208ENST00000480340 NUP160Q12769 1436 aa21.86■■□□□ 1.09
DENND4B-208ENST00000480340 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
DENND4B-208ENST00000480340 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
DENND4B-208ENST00000480340 FHOD3Q2V2M9 1422 aa21.82■■□□□ 1.08
DENND4B-208ENST00000480340 UGGT2Q9NYU1 1516 aa21.78■■□□□ 1.08
DENND4B-208ENST00000480340 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
DENND4B-208ENST00000480340 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
DENND4B-208ENST00000480340 DISP1Q96F81 1524 aa21.7■■□□□ 1.06
DENND4B-208ENST00000480340 KIAA0556O60303 1618 aa21.7■■□□□ 1.06
DENND4B-208ENST00000480340 ZEB1P37275 1124 aaPredicted RBP21.7■■□□□ 1.06
DENND4B-208ENST00000480340 TTBK1Q5TCY1 1321 aaPredicted RBP21.68■■□□□ 1.06
DENND4B-208ENST00000480340 PCF11O94913 1555 aaKnown RBP21.67■■□□□ 1.06
DENND4B-208ENST00000480340 APLP2Q06481 763 aa21.67■■□□□ 1.06
DENND4B-208ENST00000480340 FMN1Q68DA7 1419 aa21.66■■□□□ 1.06
DENND4B-208ENST00000480340 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
DENND4B-208ENST00000480340 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
DENND4B-208ENST00000480340 CARMIL2Q6F5E8 1435 aa21.62■■□□□ 1.05
DENND4B-208ENST00000480340 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
DENND4B-208ENST00000480340 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
DENND4B-208ENST00000480340 CASKIN1Q8WXD9 1431 aa21.59■■□□□ 1.05
DENND4B-208ENST00000480340 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.05
DENND4B-208ENST00000480340 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
DENND4B-208ENST00000480340 OSCARQ8IYS5 282 aa21.54■■□□□ 1.04
DENND4B-208ENST00000480340 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
DENND4B-208ENST00000480340 TIAM1Q13009 1591 aa21.53■■□□□ 1.04
DENND4B-208ENST00000480340 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
DENND4B-208ENST00000480340 CFAP43Q8NDM7 1665 aa21.51■■□□□ 1.03
DENND4B-208ENST00000480340 HECW1Q76N89 1606 aa21.49■■□□□ 1.03
DENND4B-208ENST00000480340 RAPGEF6Q8TEU7 1601 aa21.48■■□□□ 1.03
DENND4B-208ENST00000480340 MAP3K1Q13233 1512 aa21.47■■□□□ 1.03
DENND4B-208ENST00000480340 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
DENND4B-208ENST00000480340 PLB1Q6P1J6 1458 aa21.46■■□□□ 1.03
DENND4B-208ENST00000480340 MYT1Q01538 1121 aa21.45■■□□□ 1.02
DENND4B-208ENST00000480340 PTPRGP23470 1445 aa21.44■■□□□ 1.02
DENND4B-208ENST00000480340 LRRC9Q6ZRR7 1453 aa21.41■■□□□ 1.02
DENND4B-208ENST00000480340 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
DENND4B-208ENST00000480340 CDK13Q14004 1512 aaKnown RBP21.4■■□□□ 1.02
DENND4B-208ENST00000480340 NUP153P49790 1475 aaKnown RBP21.4■■□□□ 1.02
DENND4B-208ENST00000480340 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
DENND4B-208ENST00000480340 ABCA8O94911 1581 aa21.39■■□□□ 1.01
DENND4B-208ENST00000480340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
DENND4B-208ENST00000480340 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
DENND4B-208ENST00000480340 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
DENND4B-208ENST00000480340 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
DENND4B-208ENST00000480340 UACAQ9BZF9 1416 aa21.3■■□□□ 1
DENND4B-208ENST00000480340 EHBP1L1Q8N3D4 1523 aa21.28■■□□□ 1
DENND4B-208ENST00000480340 ATP10BO94823 1461 aa21.25■□□□□ 0.99
DENND4B-208ENST00000480340 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
DENND4B-208ENST00000480340 SUPT6HQ7KZ85 1726 aaKnown RBP21.25■□□□□ 0.99
DENND4B-208ENST00000480340 PHLDB1Q86UU1 1377 aa21.22■□□□□ 0.99
DENND4B-208ENST00000480340 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
DENND4B-208ENST00000480340 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
DENND4B-208ENST00000480340 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
DENND4B-208ENST00000480340 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
DENND4B-208ENST00000480340 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
DENND4B-208ENST00000480340 UHRF1BP1LA0JNW5 1464 aa21.17■□□□□ 0.98
DENND4B-208ENST00000480340 ADCY10Q96PN6 1610 aa21.17■□□□□ 0.98
DENND4B-208ENST00000480340 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
DENND4B-208ENST00000480340 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
DENND4B-208ENST00000480340 PLEKHD1A6NEE1 506 aa21.15■□□□□ 0.98
DENND4B-208ENST00000480340 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
DENND4B-208ENST00000480340 CCNB3Q8WWL7 1395 aa21.13■□□□□ 0.97
DENND4B-208ENST00000480340 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
DENND4B-208ENST00000480340 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
DENND4B-208ENST00000480340 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
DENND4B-208ENST00000480340 KIF14Q15058 1648 aa21.13■□□□□ 0.97
DENND4B-208ENST00000480340 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
DENND4B-208ENST00000480340 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
DENND4B-208ENST00000480340 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
DENND4B-208ENST00000480340 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.96
DENND4B-208ENST00000480340 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
DENND4B-208ENST00000480340 ITGAEP38570 1179 aa21.04■□□□□ 0.96
DENND4B-208ENST00000480340 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
DENND4B-208ENST00000480340 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
DENND4B-208ENST00000480340 PTPN23Q9H3S7 1636 aa21.01■□□□□ 0.95
DENND4B-208ENST00000480340 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
DENND4B-208ENST00000480340 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
DENND4B-208ENST00000480340 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
DENND4B-208ENST00000480340 CDC42BPAQ5VT25 1732 aa20.99■□□□□ 0.95
DENND4B-208ENST00000480340 ABCC10Q5T3U5 1492 aa20.99■□□□□ 0.95
DENND4B-208ENST00000480340 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
DENND4B-208ENST00000480340 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
DENND4B-208ENST00000480340 MIA2Q96PC5 1412 aa20.95■□□□□ 0.95
DENND4B-208ENST00000480340 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms