RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 IGF1RP08069 1367 aa12.56□□□□□ -0.4
PKP4-210ENST00000480171 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
PKP4-210ENST00000480171 ARXQ96QS3 562 aa12.56□□□□□ -0.4
PKP4-210ENST00000480171 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
PKP4-210ENST00000480171 ITGAEP38570 1179 aa12.55□□□□□ -0.4
PKP4-210ENST00000480171 TIAM1Q13009 1591 aa12.55□□□□□ -0.4
PKP4-210ENST00000480171 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
PKP4-210ENST00000480171 CADPSQ9ULU8 1353 aa12.53□□□□□ -0.4
PKP4-210ENST00000480171 RAB3GAP2Q9H2M9 1393 aa12.51□□□□□ -0.41
PKP4-210ENST00000480171 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
PKP4-210ENST00000480171 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
PKP4-210ENST00000480171 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
PKP4-210ENST00000480171 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
PKP4-210ENST00000480171 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
PKP4-210ENST00000480171 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
PKP4-210ENST00000480171 MAPKBP1O60336 1514 aa12.45□□□□□ -0.42
PKP4-210ENST00000480171 CFAP43Q8NDM7 1665 aa12.45□□□□□ -0.42
PKP4-210ENST00000480171 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
PKP4-210ENST00000480171 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
PKP4-210ENST00000480171 PHLDB1Q86UU1 1377 aa12.44□□□□□ -0.42
PKP4-210ENST00000480171 SUPT16HQ9Y5B9 1047 aaKnown RBP12.42□□□□□ -0.42
PKP4-210ENST00000480171 PCF11O94913 1555 aaKnown RBP12.41□□□□□ -0.42
PKP4-210ENST00000480171 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
PKP4-210ENST00000480171 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.42
PKP4-210ENST00000480171 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.42
PKP4-210ENST00000480171 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.43
PKP4-210ENST00000480171 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
PKP4-210ENST00000480171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
PKP4-210ENST00000480171 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
PKP4-210ENST00000480171 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.433e-9■■■■■ 32.3
PKP4-210ENST00000480171 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
PKP4-210ENST00000480171 ABCA10Q8WWZ4 1543 aa12.37□□□□□ -0.43
PKP4-210ENST00000480171 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
PKP4-210ENST00000480171 CUL7Q14999 1698 aa12.36□□□□□ -0.43
PKP4-210ENST00000480171 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
PKP4-210ENST00000480171 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
PKP4-210ENST00000480171 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
PKP4-210ENST00000480171 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
PKP4-210ENST00000480171 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.44
PKP4-210ENST00000480171 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.44
PKP4-210ENST00000480171 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
PKP4-210ENST00000480171 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
PKP4-210ENST00000480171 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
PKP4-210ENST00000480171 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
PKP4-210ENST00000480171 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
PKP4-210ENST00000480171 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
PKP4-210ENST00000480171 MTUS2Q5JR59 1369 aa12.28□□□□□ -0.44
PKP4-210ENST00000480171 CCER2I3L3R5 266 aa12.28□□□□□ -0.44
PKP4-210ENST00000480171 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
PKP4-210ENST00000480171 TONSLQ96HA7 1378 aa12.27□□□□□ -0.44
PKP4-210ENST00000480171 ANP32CO43423 234 aa12.27□□□□□ -0.44
PKP4-210ENST00000480171 CCDC18Q5T9S5 1454 aa12.26□□□□□ -0.45
PKP4-210ENST00000480171 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
PKP4-210ENST00000480171 SNAPC4Q5SXM2 1469 aa12.25□□□□□ -0.45
PKP4-210ENST00000480171 HFM1A2PYH4 1435 aa12.24□□□□□ -0.45
PKP4-210ENST00000480171 UACAQ9BZF9 1416 aa12.24□□□□□ -0.45
PKP4-210ENST00000480171 NEFLP07196 543 aa12.23□□□□□ -0.45
PKP4-210ENST00000480171 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
PKP4-210ENST00000480171 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
PKP4-210ENST00000480171 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
PKP4-210ENST00000480171 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
PKP4-210ENST00000480171 NESP48681 1621 aa12.22□□□□□ -0.45
PKP4-210ENST00000480171 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
PKP4-210ENST00000480171 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
PKP4-210ENST00000480171 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
PKP4-210ENST00000480171 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.46
PKP4-210ENST00000480171 FKBP8Q14318 412 aa12.2□□□□□ -0.46
PKP4-210ENST00000480171 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
PKP4-210ENST00000480171 HOMEZQ8IX15 550 aa12.2□□□□□ -0.46
PKP4-210ENST00000480171 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
PKP4-210ENST00000480171 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
PKP4-210ENST00000480171 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
PKP4-210ENST00000480171 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
PKP4-210ENST00000480171 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
PKP4-210ENST00000480171 GAPVD1Q14C86 1478 aa12.18□□□□□ -0.46
PKP4-210ENST00000480171 NAIPQ13075 1403 aa12.18□□□□□ -0.46
PKP4-210ENST00000480171 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
PKP4-210ENST00000480171 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
PKP4-210ENST00000480171 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
PKP4-210ENST00000480171 BCANQ96GW7 911 aa12.17□□□□□ -0.46
PKP4-210ENST00000480171 LRRIQ1Q96JM4 1722 aa12.15□□□□□ -0.46
PKP4-210ENST00000480171 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
PKP4-210ENST00000480171 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
PKP4-210ENST00000480171 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
PKP4-210ENST00000480171 UGGT2Q9NYU1 1516 aa12.14□□□□□ -0.47
PKP4-210ENST00000480171 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
PKP4-210ENST00000480171 TCOF1Q13428 1488 aaKnown RBP12.11□□□□□ -0.47
PKP4-210ENST00000480171 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
PKP4-210ENST00000480171 AKNAQ7Z591 1439 aa12.1□□□□□ -0.47
PKP4-210ENST00000480171 AEBP2Q6ZN18 517 aaPredicted RBP12.1□□□□□ -0.47
PKP4-210ENST00000480171 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
PKP4-210ENST00000480171 RRP7BPQ9NSQ0 103 aa12.09□□□□□ -0.47
PKP4-210ENST00000480171 ANP32EQ9BTT0 268 aa12.08□□□□□ -0.48
PKP4-210ENST00000480171 KDM5BQ9UGL1 1544 aa12.07□□□□□ -0.48
PKP4-210ENST00000480171 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
PKP4-210ENST00000480171 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
PKP4-210ENST00000480171 MAGI3Q5TCQ9 1506 aa12.07□□□□□ -0.48
PKP4-210ENST00000480171 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
PKP4-210ENST00000480171 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
PKP4-210ENST00000480171 EPRSP07814 1512 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms