RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 SOCS7O14512 581 aa19.36■□□□□ 0.69
HCLS1-206ENST00000479994 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
HCLS1-206ENST00000479994 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
HCLS1-206ENST00000479994 SHROOM2Q13796 1616 aa19.33■□□□□ 0.69
HCLS1-206ENST00000479994 MAPKBP1O60336 1514 aa19.32■□□□□ 0.68
HCLS1-206ENST00000479994 ILDR2Q71H61 639 aa19.3■□□□□ 0.68
HCLS1-206ENST00000479994 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
HCLS1-206ENST00000479994 NUP160Q12769 1436 aa19.24■□□□□ 0.67
HCLS1-206ENST00000479994 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
HCLS1-206ENST00000479994 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
HCLS1-206ENST00000479994 EEA1Q15075 1411 aa19.17■□□□□ 0.66
HCLS1-206ENST00000479994 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
HCLS1-206ENST00000479994 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
HCLS1-206ENST00000479994 ADCY10Q96PN6 1610 aa19.15■□□□□ 0.66
HCLS1-206ENST00000479994 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
HCLS1-206ENST00000479994 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
HCLS1-206ENST00000479994 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
HCLS1-206ENST00000479994 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
HCLS1-206ENST00000479994 COL17A1Q9UMD9 1497 aaPredicted RBP19.05■□□□□ 0.64
HCLS1-206ENST00000479994 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
HCLS1-206ENST00000479994 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
HCLS1-206ENST00000479994 CUL7Q14999 1698 aa19.02■□□□□ 0.64
HCLS1-206ENST00000479994 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
HCLS1-206ENST00000479994 GLI2P10070 1586 aa18.93■□□□□ 0.62
HCLS1-206ENST00000479994 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
HCLS1-206ENST00000479994 KIF21BO75037 1637 aa18.9■□□□□ 0.62
HCLS1-206ENST00000479994 RUSC2Q8N2Y8 1516 aa18.89■□□□□ 0.61
HCLS1-206ENST00000479994 IGF1RP08069 1367 aa18.88■□□□□ 0.61
HCLS1-206ENST00000479994 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
HCLS1-206ENST00000479994 PRXQ9BXM0 1461 aa18.83■□□□□ 0.6
HCLS1-206ENST00000479994 ASXL2Q76L83 1435 aa18.83■□□□□ 0.6
HCLS1-206ENST00000479994 CERKQ8TCT0 537 aa18.82■□□□□ 0.6
HCLS1-206ENST00000479994 RAPGEF2Q9Y4G8 1499 aa18.82■□□□□ 0.6
HCLS1-206ENST00000479994 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
HCLS1-206ENST00000479994 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
HCLS1-206ENST00000479994 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
HCLS1-206ENST00000479994 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
HCLS1-206ENST00000479994 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
HCLS1-206ENST00000479994 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.6
HCLS1-206ENST00000479994 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
HCLS1-206ENST00000479994 ABCC2Q92887 1545 aa18.75■□□□□ 0.59
HCLS1-206ENST00000479994 PTPRMP28827 1452 aa18.75■□□□□ 0.59
HCLS1-206ENST00000479994 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
HCLS1-206ENST00000479994 EPRSP07814 1512 aaKnown RBP18.7■□□□□ 0.58
HCLS1-206ENST00000479994 ADAMTSL3P82987 1691 aa18.69■□□□□ 0.58
HCLS1-206ENST00000479994 PTPRGP23470 1445 aa18.67■□□□□ 0.58
HCLS1-206ENST00000479994 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
HCLS1-206ENST00000479994 KIAA0586Q9BVV6 1533 aa18.62■□□□□ 0.57
HCLS1-206ENST00000479994 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
HCLS1-206ENST00000479994 HSPA2P54652 639 aa18.6■□□□□ 0.57
HCLS1-206ENST00000479994 TNIKQ9UKE5 1360 aa18.59■□□□□ 0.57
HCLS1-206ENST00000479994 IQGAP2Q13576 1575 aa18.59■□□□□ 0.57
HCLS1-206ENST00000479994 UHRF1BP1LA0JNW5 1464 aa18.57■□□□□ 0.56
HCLS1-206ENST00000479994 MADDQ8WXG6 1647 aa18.53■□□□□ 0.56
HCLS1-206ENST00000479994 KDM5BQ9UGL1 1544 aa18.52■□□□□ 0.56
HCLS1-206ENST00000479994 EFCAB5A4FU69 1503 aa18.51■□□□□ 0.55
HCLS1-206ENST00000479994 BCORL1Q5H9F3 1711 aa18.51■□□□□ 0.55
HCLS1-206ENST00000479994 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
HCLS1-206ENST00000479994 UACAQ9BZF9 1416 aa18.49■□□□□ 0.55
HCLS1-206ENST00000479994 MAGI3Q5TCQ9 1506 aa18.49■□□□□ 0.55
HCLS1-206ENST00000479994 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
HCLS1-206ENST00000479994 CFAP43Q8NDM7 1665 aa18.45■□□□□ 0.54
HCLS1-206ENST00000479994 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
HCLS1-206ENST00000479994 CD109Q6YHK3 1445 aa18.44■□□□□ 0.54
HCLS1-206ENST00000479994 RIMS1Q86UR5 1692 aaKnown RBP18.44■□□□□ 0.54
HCLS1-206ENST00000479994 SAMD9Q5K651 1589 aa18.43■□□□□ 0.54
HCLS1-206ENST00000479994 CARMIL2Q6F5E8 1435 aa18.43■□□□□ 0.54
HCLS1-206ENST00000479994 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
HCLS1-206ENST00000479994 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
HCLS1-206ENST00000479994 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
HCLS1-206ENST00000479994 CLIP1P30622 1438 aa18.4■□□□□ 0.54
HCLS1-206ENST00000479994 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.54
HCLS1-206ENST00000479994 KIAA0556O60303 1618 aa18.38■□□□□ 0.53
HCLS1-206ENST00000479994 ARID4BQ4LE39 1312 aaPredicted RBP18.34■□□□□ 0.53
HCLS1-206ENST00000479994 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
HCLS1-206ENST00000479994 DISP1Q96F81 1524 aa18.32■□□□□ 0.52
HCLS1-206ENST00000479994 KCNH8Q96L42 1107 aa18.31■□□□□ 0.52
HCLS1-206ENST00000479994 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
HCLS1-206ENST00000479994 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
HCLS1-206ENST00000479994 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
HCLS1-206ENST00000479994 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
HCLS1-206ENST00000479994 YEATS2Q9ULM3 1422 aa18.24■□□□□ 0.51
HCLS1-206ENST00000479994 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
HCLS1-206ENST00000479994 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
HCLS1-206ENST00000479994 LTBP4Q8N2S1 1624 aa18.2■□□□□ 0.5
HCLS1-206ENST00000479994 FHOD3Q2V2M9 1422 aa18.2■□□□□ 0.5
HCLS1-206ENST00000479994 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
HCLS1-206ENST00000479994 FRMPD1Q5SYB0 1578 aa18.2■□□□□ 0.5
HCLS1-206ENST00000479994 PREX1Q8TCU6 1659 aa18.19■□□□□ 0.5
HCLS1-206ENST00000479994 IQSEC2Q5JU85 1478 aa18.19■□□□□ 0.5
HCLS1-206ENST00000479994 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
HCLS1-206ENST00000479994 HECW1Q76N89 1606 aa18.17■□□□□ 0.5
HCLS1-206ENST00000479994 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
HCLS1-206ENST00000479994 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
HCLS1-206ENST00000479994 MED1Q15648 1581 aaPredicted RBP18.16■□□□□ 0.5
HCLS1-206ENST00000479994 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
HCLS1-206ENST00000479994 ARHGEF40Q8TER5 1519 aa18.14■□□□□ 0.49
HCLS1-206ENST00000479994 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
HCLS1-206ENST00000479994 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
HCLS1-206ENST00000479994 SIGLEC1Q9BZZ2 1709 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms