RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 CLSPNQ9HAW4 1339 aa28.41■■■□□ 2.14
TNFRSF8-204ENST00000479933 DIEXFQ68CQ4 756 aaKnown RBP28.39■■■□□ 2.13
TNFRSF8-204ENST00000479933 EFCAB5A4FU69 1503 aa28.38■■■□□ 2.13
TNFRSF8-204ENST00000479933 CTTNBP2Q8WZ74 1663 aa28.36■■■□□ 2.13
TNFRSF8-204ENST00000479933 CCNB3Q8WWL7 1395 aa28.36■■■□□ 2.13
TNFRSF8-204ENST00000479933 ZNF316A6NFI3 1004 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF8-204ENST00000479933 CENPBP07199 599 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF8-204ENST00000479933 CFAP43Q8NDM7 1665 aa28.32■■■□□ 2.12
TNFRSF8-204ENST00000479933 ABCA5Q8WWZ7 1642 aa28.31■■■□□ 2.12
TNFRSF8-204ENST00000479933 GTF3C3Q9Y5Q9 886 aa28.3■■■□□ 2.12
TNFRSF8-204ENST00000479933 LRRC9Q6ZRR7 1453 aa28.28■■■□□ 2.12
TNFRSF8-204ENST00000479933 PCF11O94913 1555 aaKnown RBP28.25■■■□□ 2.11
TNFRSF8-204ENST00000479933 DHX57Q6P158 1386 aaKnown RBP28.25■■■□□ 2.11
TNFRSF8-204ENST00000479933 AQRO60306 1485 aaKnown RBP eCLIP28.25■■■□□ 2.11
TNFRSF8-204ENST00000479933 KIF21AQ7Z4S6 1674 aa28.24■■■□□ 2.11
TNFRSF8-204ENST00000479933 FYCO1Q9BQS8 1478 aa28.24■■■□□ 2.11
TNFRSF8-204ENST00000479933 GAPVD1Q14C86 1478 aa28.2■■■□□ 2.11
TNFRSF8-204ENST00000479933 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
TNFRSF8-204ENST00000479933 FHOD3Q2V2M9 1422 aa28.16■■■□□ 2.1
TNFRSF8-204ENST00000479933 FMN1Q68DA7 1419 aa28.14■■■□□ 2.09
TNFRSF8-204ENST00000479933 TDRD9Q8NDG6 1382 aaKnown RBP28.13■■■□□ 2.09
TNFRSF8-204ENST00000479933 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
TNFRSF8-204ENST00000479933 P3H3Q8IVL6 736 aa28.1■■■□□ 2.09
TNFRSF8-204ENST00000479933 SAMD9Q5K651 1589 aa28.09■■■□□ 2.09
TNFRSF8-204ENST00000479933 PHLDB1Q86UU1 1377 aa28.06■■■□□ 2.08
TNFRSF8-204ENST00000479933 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
TNFRSF8-204ENST00000479933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28■■■□□ 2.07
TNFRSF8-204ENST00000479933 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
TNFRSF8-204ENST00000479933 ATP1B4Q9UN42 357 aaPredicted RBP27.99■■■□□ 2.07
TNFRSF8-204ENST00000479933 PBRM1Q86U86 1689 aa27.99■■■□□ 2.07
TNFRSF8-204ENST00000479933 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
TNFRSF8-204ENST00000479933 ITGAEP38570 1179 aa27.98■■■□□ 2.07
TNFRSF8-204ENST00000479933 SETD5Q9C0A6 1442 aa27.97■■■□□ 2.07
TNFRSF8-204ENST00000479933 RAB3GAP2Q9H2M9 1393 aa27.97■■■□□ 2.07
TNFRSF8-204ENST00000479933 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
TNFRSF8-204ENST00000479933 FAM50AQ14320 339 aaKnown RBP27.9■■■□□ 2.06
TNFRSF8-204ENST00000479933 GRIN2BQ13224 1484 aa27.88■■■□□ 2.05
TNFRSF8-204ENST00000479933 ADAMTS12P58397 1594 aa27.87■■■□□ 2.05
TNFRSF8-204ENST00000479933 MTUS2Q5JR59 1369 aa27.84■■■□□ 2.05
TNFRSF8-204ENST00000479933 LRRIQ1Q96JM4 1722 aa27.83■■■□□ 2.05
TNFRSF8-204ENST00000479933 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
TNFRSF8-204ENST00000479933 FGD6Q6ZV73 1430 aa27.82■■■□□ 2.04
TNFRSF8-204ENST00000479933 IQGAP2Q13576 1575 aa27.81■■■□□ 2.04
TNFRSF8-204ENST00000479933 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
TNFRSF8-204ENST00000479933 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
TNFRSF8-204ENST00000479933 CCDC18Q5T9S5 1454 aa27.78■■■□□ 2.04
TNFRSF8-204ENST00000479933 WDR62O43379 1518 aa27.78■■■□□ 2.04
TNFRSF8-204ENST00000479933 SUPT6HQ7KZ85 1726 aaKnown RBP27.78■■■□□ 2.04
TNFRSF8-204ENST00000479933 MIER1Q8N108 512 aa27.74■■■□□ 2.03
TNFRSF8-204ENST00000479933 HECW1Q76N89 1606 aa27.73■■■□□ 2.03
TNFRSF8-204ENST00000479933 NCOA2Q15596 1464 aa27.72■■■□□ 2.03
TNFRSF8-204ENST00000479933 MYOM3Q5VTT5 1437 aa27.7■■■□□ 2.03
TNFRSF8-204ENST00000479933 UGGT2Q9NYU1 1516 aa27.67■■■□□ 2.02
TNFRSF8-204ENST00000479933 TIMELESSQ9UNS1 1208 aa27.66■■■□□ 2.02
TNFRSF8-204ENST00000479933 ARHGEF11O15085 1522 aa27.66■■■□□ 2.02
TNFRSF8-204ENST00000479933 HFM1A2PYH4 1435 aa27.61■■■□□ 2.01
TNFRSF8-204ENST00000479933 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
TNFRSF8-204ENST00000479933 PTPN23Q9H3S7 1636 aa27.59■■■□□ 2.01
TNFRSF8-204ENST00000479933 EPRSP07814 1512 aaKnown RBP27.58■■■□□ 2
TNFRSF8-204ENST00000479933 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2
TNFRSF8-204ENST00000479933 MAGI3Q5TCQ9 1506 aa27.57■■■□□ 2
TNFRSF8-204ENST00000479933 EIF4G3O43432 1585 aaKnown RBP27.54■■■□□ 2
TNFRSF8-204ENST00000479933 TCOF1Q13428 1488 aaKnown RBP27.53■■■□□ 2
TNFRSF8-204ENST00000479933 PTPRKQ15262 1439 aa27.52■■■□□ 2
TNFRSF8-204ENST00000479933 UACAQ9BZF9 1416 aa27.51■■□□□ 1.99
TNFRSF8-204ENST00000479933 ERCC6Q03468 1493 aa27.5■■□□□ 1.99
TNFRSF8-204ENST00000479933 GRIN2AQ12879 1464 aa27.5■■□□□ 1.99
TNFRSF8-204ENST00000479933 KIAA0556O60303 1618 aa27.5■■□□□ 1.99
TNFRSF8-204ENST00000479933 NAIPQ13075 1403 aa27.48■■□□□ 1.99
TNFRSF8-204ENST00000479933 YTHDC1Q96MU7 727 aaKnown RBP27.47■■□□□ 1.99
TNFRSF8-204ENST00000479933 MIA2Q96PC5 1412 aa27.47■■□□□ 1.99
TNFRSF8-204ENST00000479933 MAGI1Q96QZ7 1491 aaPredicted RBP27.47■■□□□ 1.99
TNFRSF8-204ENST00000479933 SIN3AQ96ST3 1273 aa27.46■■□□□ 1.99
TNFRSF8-204ENST00000479933 DISP1Q96F81 1524 aa27.44■■□□□ 1.98
TNFRSF8-204ENST00000479933 CDK13Q14004 1512 aaKnown RBP27.43■■□□□ 1.98
TNFRSF8-204ENST00000479933 AKNAQ7Z591 1439 aa27.43■■□□□ 1.98
TNFRSF8-204ENST00000479933 GCC2Q8IWJ2 1684 aa27.42■■□□□ 1.98
TNFRSF8-204ENST00000479933 RAPGEF6Q8TEU7 1601 aa27.38■■□□□ 1.97
TNFRSF8-204ENST00000479933 SYNJ2O15056 1496 aa27.36■■□□□ 1.97
TNFRSF8-204ENST00000479933 PPP1R15AO75807 674 aaPredicted RBP27.35■■□□□ 1.97
TNFRSF8-204ENST00000479933 NUP153P49790 1475 aaKnown RBP27.32■■□□□ 1.96
TNFRSF8-204ENST00000479933 BCL11AQ9H165 835 aa27.31■■□□□ 1.96
TNFRSF8-204ENST00000479933 TONSLQ96HA7 1378 aa27.31■■□□□ 1.96
TNFRSF8-204ENST00000479933 CDK11AQ9UQ88 783 aaPredicted RBP27.29■■□□□ 1.96
TNFRSF8-204ENST00000479933 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
TNFRSF8-204ENST00000479933 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
TNFRSF8-204ENST00000479933 ANP32EQ9BTT0 268 aa27.27■■□□□ 1.96
TNFRSF8-204ENST00000479933 NUP160Q12769 1436 aa27.22■■□□□ 1.95
TNFRSF8-204ENST00000479933 CARMIL2Q6F5E8 1435 aa27.22■■□□□ 1.95
TNFRSF8-204ENST00000479933 ROCK1Q13464 1354 aa27.22■■□□□ 1.95
TNFRSF8-204ENST00000479933 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
TNFRSF8-204ENST00000479933 DNMT1P26358 1616 aaKnown RBP27.21■■□□□ 1.95
TNFRSF8-204ENST00000479933 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
TNFRSF8-204ENST00000479933 DAPK1P53355 1430 aa27.17■■□□□ 1.94
TNFRSF8-204ENST00000479933 ARID3CA6NKF2 412 aa27.17■■□□□ 1.94
TNFRSF8-204ENST00000479933 TROQ12816 1431 aaPredicted RBP27.17■■□□□ 1.94
TNFRSF8-204ENST00000479933 ITSN2Q9NZM3 1697 aa27.16■■□□□ 1.94
TNFRSF8-204ENST00000479933 ADCY10Q96PN6 1610 aa27.15■■□□□ 1.94
TNFRSF8-204ENST00000479933 KDM6BO15054 1643 aa27.13■■□□□ 1.93
TNFRSF8-204ENST00000479933 ABCC5O15440 1437 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms