RNA–Protein interactions for RNA: ENST00000479687.6

VAMP7-205, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-205ENST00000479687 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
VAMP7-205ENST00000479687 ILDR1Q86SU0 546 aaPredicted RBP12.92□□□□□ -0.34
VAMP7-205ENST00000479687 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
VAMP7-205ENST00000479687 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
VAMP7-205ENST00000479687 FGD5Q6ZNL6 1462 aa12.9□□□□□ -0.34
VAMP7-205ENST00000479687 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
VAMP7-205ENST00000479687 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
VAMP7-205ENST00000479687 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
VAMP7-205ENST00000479687 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
VAMP7-205ENST00000479687 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
VAMP7-205ENST00000479687 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.35
VAMP7-205ENST00000479687 CUX1P39880 1505 aa12.79□□□□□ -0.36
VAMP7-205ENST00000479687 CEP170Q5SW79 1584 aa12.77□□□□□ -0.36
VAMP7-205ENST00000479687 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
VAMP7-205ENST00000479687 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
VAMP7-205ENST00000479687 FAM69CQ0P6D2 419 aa12.74□□□□□ -0.37
VAMP7-205ENST00000479687 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
VAMP7-205ENST00000479687 KDM6BO15054 1643 aa12.7□□□□□ -0.38
VAMP7-205ENST00000479687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.385e-7■■□□□ 12
VAMP7-205ENST00000479687 NUP160Q12769 1436 aa12.69□□□□□ -0.38
VAMP7-205ENST00000479687 SHROOM2Q13796 1616 aa12.69□□□□□ -0.38
VAMP7-205ENST00000479687 ADAMTS12P58397 1594 aa12.68□□□□□ -0.38
VAMP7-205ENST00000479687 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
VAMP7-205ENST00000479687 ABCC10Q5T3U5 1492 aa12.67□□□□□ -0.38
VAMP7-205ENST00000479687 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
VAMP7-205ENST00000479687 TSPOAP1O95153 1857 aa12.66□□□□□ -0.38
VAMP7-205ENST00000479687 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
VAMP7-205ENST00000479687 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
VAMP7-205ENST00000479687 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
VAMP7-205ENST00000479687 MAPKBP1O60336 1514 aa12.61□□□□□ -0.39
VAMP7-205ENST00000479687 FHAD1B1AJZ9 1412 aa12.61□□□□□ -0.39
VAMP7-205ENST00000479687 JPH4Q96JJ6 628 aa12.59□□□□□ -0.39
VAMP7-205ENST00000479687 DSG3P32926 999 aa12.58□□□□□ -0.4
VAMP7-205ENST00000479687 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
VAMP7-205ENST00000479687 ADCY10Q96PN6 1610 aa12.57□□□□□ -0.4
VAMP7-205ENST00000479687 ADGRL1O94910 1474 aa12.57□□□□□ -0.4
VAMP7-205ENST00000479687 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
VAMP7-205ENST00000479687 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
VAMP7-205ENST00000479687 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
VAMP7-205ENST00000479687 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
VAMP7-205ENST00000479687 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
VAMP7-205ENST00000479687 ERICH3Q5RHP9 1530 aa12.51□□□□□ -0.41
VAMP7-205ENST00000479687 TTBK1Q5TCY1 1321 aaPredicted RBP12.5□□□□□ -0.41
VAMP7-205ENST00000479687 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
VAMP7-205ENST00000479687 PPRC1Q5VV67 1664 aaKnown RBP12.43□□□□□ -0.42
VAMP7-205ENST00000479687 FBXO41Q8TF61 875 aa12.43□□□□□ -0.42
VAMP7-205ENST00000479687 CAPN15O75808 1086 aa12.42□□□□□ -0.42
VAMP7-205ENST00000479687 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
VAMP7-205ENST00000479687 COL17A1Q9UMD9 1497 aaPredicted RBP12.39□□□□□ -0.43
VAMP7-205ENST00000479687 PTPRGP23470 1445 aa12.38□□□□□ -0.43
VAMP7-205ENST00000479687 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
VAMP7-205ENST00000479687 GLI2P10070 1586 aa12.37□□□□□ -0.43
VAMP7-205ENST00000479687 CUL7Q14999 1698 aa12.37□□□□□ -0.43
VAMP7-205ENST00000479687 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
VAMP7-205ENST00000479687 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
VAMP7-205ENST00000479687 PLB1Q6P1J6 1458 aa12.36□□□□□ -0.43
VAMP7-205ENST00000479687 ZBTB22O15209 634 aa12.36□□□□□ -0.43
VAMP7-205ENST00000479687 TEX14Q8IWB6 1497 aa12.33□□□□□ -0.44
VAMP7-205ENST00000479687 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
VAMP7-205ENST00000479687 MAP3K4Q9Y6R4 1608 aa12.32□□□□□ -0.44
VAMP7-205ENST00000479687 EPRSP07814 1512 aaKnown RBP12.3□□□□□ -0.44
VAMP7-205ENST00000479687 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
VAMP7-205ENST00000479687 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
VAMP7-205ENST00000479687 LMTK3Q96Q04 1460 aa12.29□□□□□ -0.44
VAMP7-205ENST00000479687 KIF21BO75037 1637 aa12.26□□□□□ -0.45
VAMP7-205ENST00000479687 KIF27Q86VH2 1401 aa12.26□□□□□ -0.45
VAMP7-205ENST00000479687 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
VAMP7-205ENST00000479687 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
VAMP7-205ENST00000479687 IGF1RP08069 1367 aa12.24□□□□□ -0.45
VAMP7-205ENST00000479687 ZCCHC11Q5TAX3 1644 aaKnown RBP12.24□□□□□ -0.45
VAMP7-205ENST00000479687 KDM5BQ9UGL1 1544 aa12.21□□□□□ -0.45
VAMP7-205ENST00000479687 IQGAP2Q13576 1575 aa12.21□□□□□ -0.46
VAMP7-205ENST00000479687 KCNH8Q96L42 1107 aa12.18□□□□□ -0.46
VAMP7-205ENST00000479687 WDR7Q9Y4E6 1490 aa12.18□□□□□ -0.46
VAMP7-205ENST00000479687 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
VAMP7-205ENST00000479687 PTPRMP28827 1452 aa12.17□□□□□ -0.46
VAMP7-205ENST00000479687 CD109Q6YHK3 1445 aa12.17□□□□□ -0.46
VAMP7-205ENST00000479687 DISP1Q96F81 1524 aa12.16□□□□□ -0.46
VAMP7-205ENST00000479687 ILDR2Q71H61 639 aa12.16□□□□□ -0.46
VAMP7-205ENST00000479687 DISP3Q9P2K9 1392 aa12.16□□□□□ -0.46
VAMP7-205ENST00000479687 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
VAMP7-205ENST00000479687 CFAP43Q8NDM7 1665 aa12.15□□□□□ -0.46
VAMP7-205ENST00000479687 PCF11O94913 1555 aaKnown RBP12.14□□□□□ -0.47
VAMP7-205ENST00000479687 SOCS7O14512 581 aa12.14□□□□□ -0.47
VAMP7-205ENST00000479687 MAGI3Q5TCQ9 1506 aa12.14□□□□□ -0.47
VAMP7-205ENST00000479687 ADAMTSL3P82987 1691 aa12.13□□□□□ -0.47
VAMP7-205ENST00000479687 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
VAMP7-205ENST00000479687 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
VAMP7-205ENST00000479687 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
VAMP7-205ENST00000479687 HSPA2P54652 639 aa12.1□□□□□ -0.47
VAMP7-205ENST00000479687 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
VAMP7-205ENST00000479687 CERKQ8TCT0 537 aa12.09□□□□□ -0.47
VAMP7-205ENST00000479687 UGGT2Q9NYU1 1516 aa12.08□□□□□ -0.48
VAMP7-205ENST00000479687 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
VAMP7-205ENST00000479687 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
VAMP7-205ENST00000479687 ARAP3Q8WWN8 1544 aa12.06□□□□□ -0.48
VAMP7-205ENST00000479687 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
VAMP7-205ENST00000479687 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
VAMP7-205ENST00000479687 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
VAMP7-205ENST00000479687 RAPGEF3O95398 923 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms