RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
APTX-223ENST00000479656 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
APTX-223ENST00000479656 ARHGAP35Q9NRY4 1499 aa17.7■□□□□ 0.42
APTX-223ENST00000479656 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
APTX-223ENST00000479656 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
APTX-223ENST00000479656 KIAA0586Q9BVV6 1533 aa17.66■□□□□ 0.42
APTX-223ENST00000479656 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
APTX-223ENST00000479656 NUP160Q12769 1436 aa17.64■□□□□ 0.42
APTX-223ENST00000479656 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
APTX-223ENST00000479656 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
APTX-223ENST00000479656 CHD1O14646 1710 aa17.62■□□□□ 0.41
APTX-223ENST00000479656 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
APTX-223ENST00000479656 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
APTX-223ENST00000479656 PPARGC1BQ86YN6 1023 aaKnown RBP17.58■□□□□ 0.41
APTX-223ENST00000479656 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
APTX-223ENST00000479656 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
APTX-223ENST00000479656 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
APTX-223ENST00000479656 APLP2Q06481 763 aa17.51■□□□□ 0.39
APTX-223ENST00000479656 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
APTX-223ENST00000479656 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
APTX-223ENST00000479656 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
APTX-223ENST00000479656 FMN1Q68DA7 1419 aa17.47■□□□□ 0.39
APTX-223ENST00000479656 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
APTX-223ENST00000479656 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.38
APTX-223ENST00000479656 PRG4Q92954 1404 aaPredicted RBP17.44■□□□□ 0.38
APTX-223ENST00000479656 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
APTX-223ENST00000479656 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
APTX-223ENST00000479656 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
APTX-223ENST00000479656 PCF11O94913 1555 aaKnown RBP17.42■□□□□ 0.38
APTX-223ENST00000479656 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.38
APTX-223ENST00000479656 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
APTX-223ENST00000479656 FYCO1Q9BQS8 1478 aa17.39■□□□□ 0.37
APTX-223ENST00000479656 TRIM26Q12899 539 aaPredicted RBP17.38■□□□□ 0.37
APTX-223ENST00000479656 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
APTX-223ENST00000479656 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
APTX-223ENST00000479656 TIAM1Q13009 1591 aa17.33■□□□□ 0.36
APTX-223ENST00000479656 MAP3K1Q13233 1512 aa17.33■□□□□ 0.36
APTX-223ENST00000479656 PTPRGP23470 1445 aa17.32■□□□□ 0.36
APTX-223ENST00000479656 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
APTX-223ENST00000479656 PLB1Q6P1J6 1458 aa17.3■□□□□ 0.36
APTX-223ENST00000479656 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
APTX-223ENST00000479656 HECW1Q76N89 1606 aa17.28■□□□□ 0.36
APTX-223ENST00000479656 RAPGEF6Q8TEU7 1601 aa17.28■□□□□ 0.36
APTX-223ENST00000479656 LRRC9Q6ZRR7 1453 aa17.28■□□□□ 0.36
APTX-223ENST00000479656 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.35
APTX-223ENST00000479656 EPRSP07814 1512 aaKnown RBP17.26■□□□□ 0.35
APTX-223ENST00000479656 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
APTX-223ENST00000479656 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
APTX-223ENST00000479656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
APTX-223ENST00000479656 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
APTX-223ENST00000479656 ABCA8O94911 1581 aa17.24■□□□□ 0.35
APTX-223ENST00000479656 CDK13Q14004 1512 aaKnown RBP17.23■□□□□ 0.35
APTX-223ENST00000479656 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
APTX-223ENST00000479656 UACAQ9BZF9 1416 aa17.21■□□□□ 0.34
APTX-223ENST00000479656 MAGI3Q5TCQ9 1506 aa17.17■□□□□ 0.34
APTX-223ENST00000479656 ATP10BO94823 1461 aa17.16■□□□□ 0.34
APTX-223ENST00000479656 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
APTX-223ENST00000479656 EHBP1L1Q8N3D4 1523 aa17.13■□□□□ 0.33
APTX-223ENST00000479656 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
APTX-223ENST00000479656 ABCC2Q92887 1545 aa17.12■□□□□ 0.33
APTX-223ENST00000479656 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
APTX-223ENST00000479656 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
APTX-223ENST00000479656 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
APTX-223ENST00000479656 SUPT6HQ7KZ85 1726 aaKnown RBP17.08■□□□□ 0.33
APTX-223ENST00000479656 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
APTX-223ENST00000479656 TROQ12816 1431 aaPredicted RBP17.07■□□□□ 0.32
APTX-223ENST00000479656 RRBP1Q9P2E9 1410 aaKnown RBP17.07■□□□□ 0.32
APTX-223ENST00000479656 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
APTX-223ENST00000479656 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
APTX-223ENST00000479656 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
APTX-223ENST00000479656 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
APTX-223ENST00000479656 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
APTX-223ENST00000479656 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
APTX-223ENST00000479656 ZCCHC11Q5TAX3 1644 aaKnown RBP17.01■□□□□ 0.31
APTX-223ENST00000479656 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
APTX-223ENST00000479656 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
APTX-223ENST00000479656 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
APTX-223ENST00000479656 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
APTX-223ENST00000479656 KIF14Q15058 1648 aa16.98■□□□□ 0.31
APTX-223ENST00000479656 ITGAEP38570 1179 aa16.98■□□□□ 0.31
APTX-223ENST00000479656 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
APTX-223ENST00000479656 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
APTX-223ENST00000479656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.3
APTX-223ENST00000479656 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
APTX-223ENST00000479656 MIA2Q96PC5 1412 aa16.93■□□□□ 0.3
APTX-223ENST00000479656 GPATCH8Q9UKJ3 1502 aaKnown RBP16.93■□□□□ 0.3
APTX-223ENST00000479656 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
APTX-223ENST00000479656 PTPN23Q9H3S7 1636 aa16.91■□□□□ 0.3
APTX-223ENST00000479656 ZNF644Q9H582 1327 aaPredicted RBP16.9■□□□□ 0.3
APTX-223ENST00000479656 ASXL2Q76L83 1435 aa16.89■□□□□ 0.29
APTX-223ENST00000479656 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
APTX-223ENST00000479656 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
APTX-223ENST00000479656 TCOF1Q13428 1488 aaKnown RBP16.88■□□□□ 0.29
APTX-223ENST00000479656 WDR7Q9Y4E6 1490 aa16.88■□□□□ 0.29
APTX-223ENST00000479656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
APTX-223ENST00000479656 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
APTX-223ENST00000479656 CDC42BPAQ5VT25 1732 aa16.85■□□□□ 0.29
APTX-223ENST00000479656 TTC37Q6PGP7 1564 aa16.84■□□□□ 0.29
APTX-223ENST00000479656 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
APTX-223ENST00000479656 CAMSAP2Q08AD1 1489 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms