RNA–Protein interactions for RNA: ENST00000479452.5

EXD3-208, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene EXD3, Length 962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-208ENST00000479452 ERCC6L2Q5T890 1561 aa35.9■■■■□ 3.34
EXD3-208ENST00000479452 SHROOM2Q13796 1616 aa35.89■■■■□ 3.34
EXD3-208ENST00000479452 KIAA0586Q9BVV6 1533 aa35.87■■■■□ 3.33
EXD3-208ENST00000479452 RUSC2Q8N2Y8 1516 aa35.82■■■■□ 3.32
EXD3-208ENST00000479452 RAPGEF2Q9Y4G8 1499 aa35.73■■■■□ 3.31
EXD3-208ENST00000479452 NPM1P06748 294 aaKnown RBP eCLIP35.62■■■■□ 3.29
EXD3-208ENST00000479452 CARMIL2Q6F5E8 1435 aa35.6■■■■□ 3.29
EXD3-208ENST00000479452 TTBK1Q5TCY1 1321 aaPredicted RBP35.58■■■■□ 3.29
EXD3-208ENST00000479452 IQGAP2Q13576 1575 aa35.54■■■■□ 3.28
EXD3-208ENST00000479452 PTPRGP23470 1445 aa35.51■■■■□ 3.28
EXD3-208ENST00000479452 CSRNP3Q8WYN3 585 aa35.51■■■■□ 3.28
EXD3-208ENST00000479452 TNIKQ9UKE5 1360 aa35.48■■■■□ 3.27
EXD3-208ENST00000479452 PRXQ9BXM0 1461 aa35.43■■■■□ 3.26
EXD3-208ENST00000479452 EEA1Q15075 1411 aa35.38■■■■□ 3.25
EXD3-208ENST00000479452 FAM9AQ8IZU1 332 aaPredicted RBP35.37■■■■□ 3.25
EXD3-208ENST00000479452 CHIC1Q5VXU3 224 aa35.33■■■■□ 3.25
EXD3-208ENST00000479452 UGGT2Q9NYU1 1516 aa35.32■■■■□ 3.25
EXD3-208ENST00000479452 DISP1Q96F81 1524 aa35.32■■■■□ 3.24
EXD3-208ENST00000479452 ADCY10Q96PN6 1610 aa35.27■■■■□ 3.24
EXD3-208ENST00000479452 FAM69CQ0P6D2 419 aa35.24■■■■□ 3.23
EXD3-208ENST00000479452 GOLGA3Q08378 1498 aa35.23■■■■□ 3.23
EXD3-208ENST00000479452 UACAQ9BZF9 1416 aa35.21■■■■□ 3.23
EXD3-208ENST00000479452 CTTNBP2Q8WZ74 1663 aa35.18■■■■□ 3.22
EXD3-208ENST00000479452 KIAA0556O60303 1618 aa35.17■■■■□ 3.22
EXD3-208ENST00000479452 MAPKBP1O60336 1514 aa35.16■■■■□ 3.22
EXD3-208ENST00000479452 ABCC2Q92887 1545 aa35.13■■■■□ 3.21
EXD3-208ENST00000479452 ABCC10Q5T3U5 1492 aa35.13■■■■□ 3.21
EXD3-208ENST00000479452 UHRF1BP1LA0JNW5 1464 aa35.12■■■■□ 3.21
EXD3-208ENST00000479452 P3H3Q8IVL6 736 aa35.08■■■■□ 3.21
EXD3-208ENST00000479452 RANGAP1P46060 587 aaPredicted RBP35.05■■■■□ 3.2
EXD3-208ENST00000479452 AEBP2Q6ZN18 517 aaPredicted RBP35.02■■■■□ 3.2
EXD3-208ENST00000479452 PLB1Q6P1J6 1458 aa34.99■■■■□ 3.19
EXD3-208ENST00000479452 ASXL2Q76L83 1435 aa34.98■■■■□ 3.19
EXD3-208ENST00000479452 EHMT2Q96KQ7 1210 aa34.98■■■■□ 3.19
EXD3-208ENST00000479452 KIF13AQ9H1H9 1805 aa34.95■■■■□ 3.19
EXD3-208ENST00000479452 UBTFP17480 764 aaKnown RBP34.95■■■■□ 3.19
EXD3-208ENST00000479452 DIP2BQ9P265 1576 aa34.95■■■■□ 3.18
EXD3-208ENST00000479452 KDM5BQ9UGL1 1544 aa34.94■■■■□ 3.18
EXD3-208ENST00000479452 KIF21BO75037 1637 aa34.88■■■■□ 3.17
EXD3-208ENST00000479452 ABCA8O94911 1581 aa34.81■■■■□ 3.16
EXD3-208ENST00000479452 ZCCHC11Q5TAX3 1644 aaKnown RBP34.8■■■■□ 3.16
EXD3-208ENST00000479452 ARID3CA6NKF2 412 aa34.79■■■■□ 3.16
EXD3-208ENST00000479452 SAMD9Q5K651 1589 aa34.77■■■■□ 3.16
EXD3-208ENST00000479452 KCNH8Q96L42 1107 aa34.76■■■■□ 3.16
EXD3-208ENST00000479452 EPRSP07814 1512 aaKnown RBP34.74■■■■□ 3.15
EXD3-208ENST00000479452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.73■■■■□ 3.15
EXD3-208ENST00000479452 HNRNPUL2Q1KMD3 747 aaKnown RBP34.73■■■■□ 3.15
EXD3-208ENST00000479452 GLI2P10070 1586 aa34.73■■■■□ 3.15
EXD3-208ENST00000479452 WDR7Q9Y4E6 1490 aa34.72■■■■□ 3.15
EXD3-208ENST00000479452 FHOD3Q2V2M9 1422 aa34.71■■■■□ 3.15
EXD3-208ENST00000479452 TSPOAP1O95153 1857 aa34.65■■■■□ 3.14
EXD3-208ENST00000479452 EFCAB5A4FU69 1503 aa34.64■■■■□ 3.14
EXD3-208ENST00000479452 ATP10BO94823 1461 aa34.62■■■■□ 3.13
EXD3-208ENST00000479452 RAPGEF6Q8TEU7 1601 aa34.57■■■■□ 3.12
EXD3-208ENST00000479452 KDM6BO15054 1643 aa34.56■■■■□ 3.12
EXD3-208ENST00000479452 TEX14Q8IWB6 1497 aa34.55■■■■□ 3.12
EXD3-208ENST00000479452 CD109Q6YHK3 1445 aa34.53■■■■□ 3.12
EXD3-208ENST00000479452 ATP1B4Q9UN42 357 aaPredicted RBP34.52■■■■□ 3.12
EXD3-208ENST00000479452 PLEKHD1A6NEE1 506 aa34.5■■■■□ 3.11
EXD3-208ENST00000479452 MAP3K4Q9Y6R4 1608 aa34.48■■■■□ 3.11
EXD3-208ENST00000479452 NUP153P49790 1475 aaKnown RBP34.47■■■■□ 3.11
EXD3-208ENST00000479452 FMN1Q68DA7 1419 aa34.44■■■■□ 3.1
EXD3-208ENST00000479452 ARHGAP35Q9NRY4 1499 aa34.41■■■■□ 3.1
EXD3-208ENST00000479452 PPRC1Q5VV67 1664 aaKnown RBP34.41■■■■□ 3.1
EXD3-208ENST00000479452 MAGI3Q5TCQ9 1506 aa34.38■■■■□ 3.09
EXD3-208ENST00000479452 CFAP43Q8NDM7 1665 aa34.35■■■■□ 3.09
EXD3-208ENST00000479452 CDK11AQ9UQ88 783 aaPredicted RBP34.3■■■■□ 3.08
EXD3-208ENST00000479452 COL17A1Q9UMD9 1497 aaPredicted RBP34.29■■■■□ 3.08
EXD3-208ENST00000479452 PHLDB1Q86UU1 1377 aa34.22■■■■□ 3.07
EXD3-208ENST00000479452 ABCA9Q8IUA7 1624 aa34.21■■■■□ 3.07
EXD3-208ENST00000479452 CDK13Q14004 1512 aaKnown RBP34.2■■■■□ 3.06
EXD3-208ENST00000479452 HECW1Q76N89 1606 aa34.19■■■■□ 3.06
EXD3-208ENST00000479452 CLIP1P30622 1438 aa34.19■■■■□ 3.06
EXD3-208ENST00000479452 NEO1Q92859 1461 aa34.09■■■■□ 3.05
EXD3-208ENST00000479452 ARAP3Q8WWN8 1544 aa34.09■■■■□ 3.05
EXD3-208ENST00000479452 CASKIN1Q8WXD9 1431 aa34.07■■■■□ 3.04
EXD3-208ENST00000479452 KDM4FA0A1W2PPD8 638 aa34.05■■■■□ 3.04
EXD3-208ENST00000479452 RAPGEF3O95398 923 aa34.04■■■■□ 3.04
EXD3-208ENST00000479452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.04■■■■□ 3.046e-7■■■■■ 30.4
EXD3-208ENST00000479452 TROQ12816 1431 aaPredicted RBP33.98■■■■□ 3.03
EXD3-208ENST00000479452 FANCAO15360 1455 aa33.98■■■■□ 3.03
EXD3-208ENST00000479452 CCDC18Q5T9S5 1454 aa33.98■■■■□ 3.03
EXD3-208ENST00000479452 AKNAQ7Z591 1439 aa33.97■■■■□ 3.03
EXD3-208ENST00000479452 LOC105371045A0A1W2PR82 267 aa33.94■■■■□ 3.02
EXD3-208ENST00000479452 EFCAB2Q5VUJ9 269 aa33.94■■■■□ 3.02
EXD3-208ENST00000479452 PLCH2O75038 1416 aa33.94■■■■□ 3.02
EXD3-208ENST00000479452 PCF11O94913 1555 aaKnown RBP33.94■■■■□ 3.02
EXD3-208ENST00000479452 FYCO1Q9BQS8 1478 aa33.93■■■■□ 3.02
EXD3-208ENST00000479452 TTC37Q6PGP7 1564 aa33.93■■■■□ 3.02
EXD3-208ENST00000479452 DENND4BO75064 1496 aaPredicted RBP33.9■■■■□ 3.02
EXD3-208ENST00000479452 CEP162Q5TB80 1403 aa33.9■■■■□ 3.02
EXD3-208ENST00000479452 CFAP74Q9C0B2 1584 aa33.87■■■■□ 3.01
EXD3-208ENST00000479452 ADGRL1O94910 1474 aa33.87■■■■□ 3.01
EXD3-208ENST00000479452 KIF14Q15058 1648 aa33.86■■■■□ 3.01
EXD3-208ENST00000479452 SCAPERQ9BY12 1400 aa33.8■■■■□ 3
EXD3-208ENST00000479452 ARID4BQ4LE39 1312 aaPredicted RBP33.79■■■■□ 3
EXD3-208ENST00000479452 LRRIQ1Q96JM4 1722 aa33.77■■■■□ 3
EXD3-208ENST00000479452 ARHGAP5Q13017 1502 aa33.75■■■□□ 2.99
EXD3-208ENST00000479452 MTUS2Q5JR59 1369 aa33.72■■■□□ 2.99
EXD3-208ENST00000479452 MYO5CQ9NQX4 1742 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms