RNA–Protein interactions for RNA: ENST00000479448.1

LAMB1-212, Transcript of laminin subunit beta 1, humanhuman

TSL 3

Gene LAMB1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-212ENST00000479448 NUP160Q12769 1436 aa21.03■□□□□ 0.96
LAMB1-212ENST00000479448 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
LAMB1-212ENST00000479448 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
LAMB1-212ENST00000479448 KIAA0586Q9BVV6 1533 aa20.99■□□□□ 0.95
LAMB1-212ENST00000479448 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
LAMB1-212ENST00000479448 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
LAMB1-212ENST00000479448 CLASP1Q7Z460 1538 aa20.95■□□□□ 0.94
LAMB1-212ENST00000479448 SHROOM2Q13796 1616 aa20.86■□□□□ 0.93
LAMB1-212ENST00000479448 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
LAMB1-212ENST00000479448 CARMIL2Q6F5E8 1435 aa20.86■□□□□ 0.93
LAMB1-212ENST00000479448 EFCAB5A4FU69 1503 aa20.85■□□□□ 0.93
LAMB1-212ENST00000479448 UGGT2Q9NYU1 1516 aa20.84■□□□□ 0.93
LAMB1-212ENST00000479448 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
LAMB1-212ENST00000479448 CLIP1P30622 1438 aa20.81■□□□□ 0.92
LAMB1-212ENST00000479448 PRG4Q92954 1404 aaPredicted RBP20.81■□□□□ 0.92
LAMB1-212ENST00000479448 KIAA0556O60303 1618 aa20.79■□□□□ 0.92
LAMB1-212ENST00000479448 SAMD9Q5K651 1589 aa20.78■□□□□ 0.92
LAMB1-212ENST00000479448 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
LAMB1-212ENST00000479448 TTBK1Q5TCY1 1321 aaPredicted RBP20.75■□□□□ 0.91
LAMB1-212ENST00000479448 DISP1Q96F81 1524 aa20.73■□□□□ 0.91
LAMB1-212ENST00000479448 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
LAMB1-212ENST00000479448 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
LAMB1-212ENST00000479448 FHOD3Q2V2M9 1422 aa20.7■□□□□ 0.9
LAMB1-212ENST00000479448 ERCC6L2Q5T890 1561 aa20.69■□□□□ 0.9
LAMB1-212ENST00000479448 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
LAMB1-212ENST00000479448 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
LAMB1-212ENST00000479448 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
LAMB1-212ENST00000479448 PTPRGP23470 1445 aa20.63■□□□□ 0.89
LAMB1-212ENST00000479448 FMN1Q68DA7 1419 aa20.63■□□□□ 0.89
LAMB1-212ENST00000479448 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
LAMB1-212ENST00000479448 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
LAMB1-212ENST00000479448 RAPGEF6Q8TEU7 1601 aa20.56■□□□□ 0.88
LAMB1-212ENST00000479448 VPS8Q8N3P4 1428 aa20.54■□□□□ 0.88
LAMB1-212ENST00000479448 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
LAMB1-212ENST00000479448 HECW1Q76N89 1606 aa20.53■□□□□ 0.88
LAMB1-212ENST00000479448 PCF11O94913 1555 aaKnown RBP20.53■□□□□ 0.88
LAMB1-212ENST00000479448 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
LAMB1-212ENST00000479448 UACAQ9BZF9 1416 aa20.5■□□□□ 0.87
LAMB1-212ENST00000479448 PLB1Q6P1J6 1458 aa20.5■□□□□ 0.87
LAMB1-212ENST00000479448 FYCO1Q9BQS8 1478 aa20.5■□□□□ 0.87
LAMB1-212ENST00000479448 APLP2Q06481 763 aa20.49■□□□□ 0.87
LAMB1-212ENST00000479448 ABCA8O94911 1581 aa20.48■□□□□ 0.87
LAMB1-212ENST00000479448 CASKIN1Q8WXD9 1431 aa20.47■□□□□ 0.87
LAMB1-212ENST00000479448 ABCC2Q92887 1545 aa20.47■□□□□ 0.87
LAMB1-212ENST00000479448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
LAMB1-212ENST00000479448 NPM1P06748 294 aaKnown RBP eCLIP20.45■□□□□ 0.86
LAMB1-212ENST00000479448 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
LAMB1-212ENST00000479448 ADCY10Q96PN6 1610 aa20.43■□□□□ 0.86
LAMB1-212ENST00000479448 ARID3CA6NKF2 412 aa20.42■□□□□ 0.86
LAMB1-212ENST00000479448 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
LAMB1-212ENST00000479448 CCDC18Q5T9S5 1454 aa20.42■□□□□ 0.86
LAMB1-212ENST00000479448 NUP153P49790 1475 aaKnown RBP20.38■□□□□ 0.85
LAMB1-212ENST00000479448 ZCCHC11Q5TAX3 1644 aaKnown RBP20.38■□□□□ 0.85
LAMB1-212ENST00000479448 LRRIQ1Q96JM4 1722 aa20.37■□□□□ 0.85
LAMB1-212ENST00000479448 CFAP43Q8NDM7 1665 aa20.36■□□□□ 0.85
LAMB1-212ENST00000479448 EPRSP07814 1512 aaKnown RBP20.36■□□□□ 0.85
LAMB1-212ENST00000479448 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
LAMB1-212ENST00000479448 CDK13Q14004 1512 aaKnown RBP20.33■□□□□ 0.85
LAMB1-212ENST00000479448 TIAM1Q13009 1591 aa20.32■□□□□ 0.84
LAMB1-212ENST00000479448 KDM5BQ9UGL1 1544 aa20.31■□□□□ 0.84
LAMB1-212ENST00000479448 ATP10BO94823 1461 aa20.29■□□□□ 0.84
LAMB1-212ENST00000479448 MAP3K1Q13233 1512 aa20.27■□□□□ 0.83
LAMB1-212ENST00000479448 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
LAMB1-212ENST00000479448 PLEKHD1A6NEE1 506 aa20.26■□□□□ 0.83
LAMB1-212ENST00000479448 EHBP1L1Q8N3D4 1523 aa20.23■□□□□ 0.83
LAMB1-212ENST00000479448 MAPKBP1O60336 1514 aa20.21■□□□□ 0.83
LAMB1-212ENST00000479448 KIF14Q15058 1648 aa20.2■□□□□ 0.82
LAMB1-212ENST00000479448 SUPT6HQ7KZ85 1726 aaKnown RBP20.2■□□□□ 0.82
LAMB1-212ENST00000479448 ASXL2Q76L83 1435 aa20.19■□□□□ 0.82
LAMB1-212ENST00000479448 WDR7Q9Y4E6 1490 aa20.19■□□□□ 0.82
LAMB1-212ENST00000479448 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
LAMB1-212ENST00000479448 TROQ12816 1431 aaPredicted RBP20.18■□□□□ 0.82
LAMB1-212ENST00000479448 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
LAMB1-212ENST00000479448 PPARGC1BQ86YN6 1023 aaKnown RBP20.14■□□□□ 0.81
LAMB1-212ENST00000479448 MAGI3Q5TCQ9 1506 aa20.13■□□□□ 0.81
LAMB1-212ENST00000479448 KANK4Q5T7N3 995 aaPredicted RBP20.1■□□□□ 0.81
LAMB1-212ENST00000479448 ITSN2Q9NZM3 1697 aa20.08■□□□□ 0.81
LAMB1-212ENST00000479448 MYO5CQ9NQX4 1742 aa20.07■□□□□ 0.8
LAMB1-212ENST00000479448 NCOA2Q15596 1464 aa20.06■□□□□ 0.8
LAMB1-212ENST00000479448 DIP2BQ9P265 1576 aa20.05■□□□□ 0.8
LAMB1-212ENST00000479448 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
LAMB1-212ENST00000479448 ABCA9Q8IUA7 1624 aa20.04■□□□□ 0.8
LAMB1-212ENST00000479448 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
LAMB1-212ENST00000479448 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
LAMB1-212ENST00000479448 ABCC10Q5T3U5 1492 aa20.03■□□□□ 0.8
LAMB1-212ENST00000479448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.02■□□□□ 0.8
LAMB1-212ENST00000479448 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.8
LAMB1-212ENST00000479448 FAM69CQ0P6D2 419 aa20.02■□□□□ 0.8
LAMB1-212ENST00000479448 TSPOAP1O95153 1857 aa20.01■□□□□ 0.79
LAMB1-212ENST00000479448 GLI2P10070 1586 aa20.01■□□□□ 0.79
LAMB1-212ENST00000479448 CDC42BPAQ5VT25 1732 aa20■□□□□ 0.79
LAMB1-212ENST00000479448 PREX2Q70Z35 1606 aa19.98■□□□□ 0.79
LAMB1-212ENST00000479448 ARHGAP5Q13017 1502 aa19.98■□□□□ 0.79
LAMB1-212ENST00000479448 MAP3K4Q9Y6R4 1608 aa19.97■□□□□ 0.79
LAMB1-212ENST00000479448 CD109Q6YHK3 1445 aa19.96■□□□□ 0.79
LAMB1-212ENST00000479448 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
LAMB1-212ENST00000479448 MYOM3Q5VTT5 1437 aa19.94■□□□□ 0.78
LAMB1-212ENST00000479448 CDC42BPBQ9Y5S2 1711 aa19.93■□□□□ 0.78
LAMB1-212ENST00000479448 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
LAMB1-212ENST00000479448 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms