RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
GSDMB-209ENST00000479136 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
GSDMB-209ENST00000479136 CUL7Q14999 1698 aa16.74■□□□□ 0.27
GSDMB-209ENST00000479136 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
GSDMB-209ENST00000479136 CLIP1P30622 1438 aa16.7■□□□□ 0.26
GSDMB-209ENST00000479136 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
GSDMB-209ENST00000479136 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
GSDMB-209ENST00000479136 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
GSDMB-209ENST00000479136 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
GSDMB-209ENST00000479136 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
GSDMB-209ENST00000479136 SNAPC4Q5SXM2 1469 aa16.62■□□□□ 0.25
GSDMB-209ENST00000479136 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
GSDMB-209ENST00000479136 FBLN2P98095 1184 aa16.58■□□□□ 0.24
GSDMB-209ENST00000479136 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
GSDMB-209ENST00000479136 ANP32EQ9BTT0 268 aa16.56■□□□□ 0.24
GSDMB-209ENST00000479136 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
GSDMB-209ENST00000479136 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
GSDMB-209ENST00000479136 CTTNBP2Q8WZ74 1663 aa16.52■□□□□ 0.23
GSDMB-209ENST00000479136 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
GSDMB-209ENST00000479136 P3H3Q8IVL6 736 aa16.51■□□□□ 0.23
GSDMB-209ENST00000479136 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
GSDMB-209ENST00000479136 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
GSDMB-209ENST00000479136 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
GSDMB-209ENST00000479136 NEUROD1Q13562 356 aa16.49■□□□□ 0.23
GSDMB-209ENST00000479136 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
GSDMB-209ENST00000479136 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
GSDMB-209ENST00000479136 IQGAP2Q13576 1575 aa16.42■□□□□ 0.22
GSDMB-209ENST00000479136 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
GSDMB-209ENST00000479136 TRIM26Q12899 539 aaPredicted RBP16.41■□□□□ 0.22
GSDMB-209ENST00000479136 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
GSDMB-209ENST00000479136 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
GSDMB-209ENST00000479136 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
GSDMB-209ENST00000479136 NUP160Q12769 1436 aa16.35■□□□□ 0.21
GSDMB-209ENST00000479136 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
GSDMB-209ENST00000479136 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
GSDMB-209ENST00000479136 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
GSDMB-209ENST00000479136 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
GSDMB-209ENST00000479136 CHD1O14646 1710 aa16.31■□□□□ 0.2
GSDMB-209ENST00000479136 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
GSDMB-209ENST00000479136 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.19
GSDMB-209ENST00000479136 CARMIL2Q6F5E8 1435 aa16.26■□□□□ 0.19
GSDMB-209ENST00000479136 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
GSDMB-209ENST00000479136 FYCO1Q9BQS8 1478 aa16.25■□□□□ 0.19
GSDMB-209ENST00000479136 KIAA0556O60303 1618 aa16.24■□□□□ 0.19
GSDMB-209ENST00000479136 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
GSDMB-209ENST00000479136 KANK4Q5T7N3 995 aaPredicted RBP16.24■□□□□ 0.19
GSDMB-209ENST00000479136 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
GSDMB-209ENST00000479136 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
GSDMB-209ENST00000479136 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
GSDMB-209ENST00000479136 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
GSDMB-209ENST00000479136 ARID3CA6NKF2 412 aa16.17■□□□□ 0.18
GSDMB-209ENST00000479136 LRRC9Q6ZRR7 1453 aa16.14■□□□□ 0.17
GSDMB-209ENST00000479136 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
GSDMB-209ENST00000479136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
GSDMB-209ENST00000479136 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
GSDMB-209ENST00000479136 CFAP43Q8NDM7 1665 aa16.13■□□□□ 0.17
GSDMB-209ENST00000479136 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
GSDMB-209ENST00000479136 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
GSDMB-209ENST00000479136 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
GSDMB-209ENST00000479136 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
GSDMB-209ENST00000479136 PTPRGP23470 1445 aa16.1■□□□□ 0.17
GSDMB-209ENST00000479136 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
GSDMB-209ENST00000479136 RAPGEF6Q8TEU7 1601 aa16.09■□□□□ 0.17
GSDMB-209ENST00000479136 PLB1Q6P1J6 1458 aa16.08■□□□□ 0.17
GSDMB-209ENST00000479136 EPRSP07814 1512 aaKnown RBP16.08■□□□□ 0.17
GSDMB-209ENST00000479136 CDK13Q14004 1512 aaKnown RBP16.05■□□□□ 0.16
GSDMB-209ENST00000479136 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
GSDMB-209ENST00000479136 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
GSDMB-209ENST00000479136 NUP153P49790 1475 aaKnown RBP16.04■□□□□ 0.16
GSDMB-209ENST00000479136 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
GSDMB-209ENST00000479136 EHBP1L1Q8N3D4 1523 aa16.01■□□□□ 0.15
GSDMB-209ENST00000479136 ABCA8O94911 1581 aa16■□□□□ 0.15
GSDMB-209ENST00000479136 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
GSDMB-209ENST00000479136 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
GSDMB-209ENST00000479136 UACAQ9BZF9 1416 aa15.98■□□□□ 0.15
GSDMB-209ENST00000479136 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
GSDMB-209ENST00000479136 RRBP1Q9P2E9 1410 aaKnown RBP15.98■□□□□ 0.15
GSDMB-209ENST00000479136 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
GSDMB-209ENST00000479136 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
GSDMB-209ENST00000479136 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
GSDMB-209ENST00000479136 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
GSDMB-209ENST00000479136 ITGAEP38570 1179 aa15.96■□□□□ 0.15
GSDMB-209ENST00000479136 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
GSDMB-209ENST00000479136 ATP10BO94823 1461 aa15.93■□□□□ 0.14
GSDMB-209ENST00000479136 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
GSDMB-209ENST00000479136 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
GSDMB-209ENST00000479136 ABCC2Q92887 1545 aa15.9■□□□□ 0.14
GSDMB-209ENST00000479136 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
GSDMB-209ENST00000479136 FGD6Q6ZV73 1430 aa15.89■□□□□ 0.13
GSDMB-209ENST00000479136 MYT1LQ9UL68 1186 aa15.88■□□□□ 0.13
GSDMB-209ENST00000479136 ERICH6BQ5W0A0 696 aa15.86■□□□□ 0.13
GSDMB-209ENST00000479136 ARHGEF11O15085 1522 aa15.86■□□□□ 0.13
GSDMB-209ENST00000479136 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
GSDMB-209ENST00000479136 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.13
GSDMB-209ENST00000479136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.81■□□□□ 0.12
GSDMB-209ENST00000479136 KIF14Q15058 1648 aa15.81■□□□□ 0.12
GSDMB-209ENST00000479136 TSHZ2Q9NRE2 1034 aa15.81■□□□□ 0.12
GSDMB-209ENST00000479136 KCNH8Q96L42 1107 aa15.8■□□□□ 0.12
GSDMB-209ENST00000479136 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
GSDMB-209ENST00000479136 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms