RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 NUP160Q12769 1436 aa22.21■■□□□ 1.15
SMARCAL1-211ENST00000479008 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
SMARCAL1-211ENST00000479008 KIAA0586Q9BVV6 1533 aa22.12■■□□□ 1.13
SMARCAL1-211ENST00000479008 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
SMARCAL1-211ENST00000479008 OSCARQ8IYS5 282 aa22.11■■□□□ 1.13
SMARCAL1-211ENST00000479008 TNIKQ9UKE5 1360 aa22.11■■□□□ 1.13
SMARCAL1-211ENST00000479008 SHROOM2Q13796 1616 aa22.02■■□□□ 1.11
SMARCAL1-211ENST00000479008 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
SMARCAL1-211ENST00000479008 UGGT2Q9NYU1 1516 aa21.99■■□□□ 1.11
SMARCAL1-211ENST00000479008 JPH4Q96JJ6 628 aa21.97■■□□□ 1.11
SMARCAL1-211ENST00000479008 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
SMARCAL1-211ENST00000479008 SAMD9Q5K651 1589 aa21.94■■□□□ 1.1
SMARCAL1-211ENST00000479008 CLIP1P30622 1438 aa21.93■■□□□ 1.1
SMARCAL1-211ENST00000479008 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
SMARCAL1-211ENST00000479008 KIAA0556O60303 1618 aa21.91■■□□□ 1.1
SMARCAL1-211ENST00000479008 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
SMARCAL1-211ENST00000479008 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
SMARCAL1-211ENST00000479008 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
SMARCAL1-211ENST00000479008 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
SMARCAL1-211ENST00000479008 CARMIL2Q6F5E8 1435 aa21.87■■□□□ 1.09
SMARCAL1-211ENST00000479008 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
SMARCAL1-211ENST00000479008 FHOD3Q2V2M9 1422 aa21.82■■□□□ 1.08
SMARCAL1-211ENST00000479008 ARAP1Q96P48 1450 aa21.8■■□□□ 1.08
SMARCAL1-211ENST00000479008 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
SMARCAL1-211ENST00000479008 RIMBP3CA6NJZ7 1639 aa21.78■■□□□ 1.08
SMARCAL1-211ENST00000479008 RIMBP3BA6NNM3 1639 aa21.78■■□□□ 1.08
SMARCAL1-211ENST00000479008 RIMBP3Q9UFD9 1639 aa21.78■■□□□ 1.08
SMARCAL1-211ENST00000479008 TTBK1Q5TCY1 1321 aaPredicted RBP21.75■■□□□ 1.07
SMARCAL1-211ENST00000479008 PTPRGP23470 1445 aa21.71■■□□□ 1.07
SMARCAL1-211ENST00000479008 FMN1Q68DA7 1419 aa21.68■■□□□ 1.06
SMARCAL1-211ENST00000479008 VPS8Q8N3P4 1428 aa21.65■■□□□ 1.06
SMARCAL1-211ENST00000479008 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
SMARCAL1-211ENST00000479008 RAPGEF6Q8TEU7 1601 aa21.63■■□□□ 1.05
SMARCAL1-211ENST00000479008 ABCA8O94911 1581 aa21.62■■□□□ 1.05
SMARCAL1-211ENST00000479008 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
SMARCAL1-211ENST00000479008 PLB1Q6P1J6 1458 aa21.62■■□□□ 1.05
SMARCAL1-211ENST00000479008 CASKIN1Q8WXD9 1431 aa21.58■■□□□ 1.05
SMARCAL1-211ENST00000479008 UACAQ9BZF9 1416 aa21.58■■□□□ 1.05
SMARCAL1-211ENST00000479008 HECW1Q76N89 1606 aa21.58■■□□□ 1.04
SMARCAL1-211ENST00000479008 FYCO1Q9BQS8 1478 aa21.57■■□□□ 1.04
SMARCAL1-211ENST00000479008 ABCC2Q92887 1545 aa21.56■■□□□ 1.04
SMARCAL1-211ENST00000479008 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
SMARCAL1-211ENST00000479008 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
SMARCAL1-211ENST00000479008 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
SMARCAL1-211ENST00000479008 CYB5RLQ6IPT4 315 aa21.54■■□□□ 1.04
SMARCAL1-211ENST00000479008 UHRF1BP1LA0JNW5 1464 aa21.52■■□□□ 1.04
SMARCAL1-211ENST00000479008 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
SMARCAL1-211ENST00000479008 ARID3CA6NKF2 412 aa21.47■■□□□ 1.03
SMARCAL1-211ENST00000479008 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
SMARCAL1-211ENST00000479008 ZCCHC11Q5TAX3 1644 aaKnown RBP21.46■■□□□ 1.03
SMARCAL1-211ENST00000479008 CFAP43Q8NDM7 1665 aa21.46■■□□□ 1.03
SMARCAL1-211ENST00000479008 CDK13Q14004 1512 aaKnown RBP21.45■■□□□ 1.02
SMARCAL1-211ENST00000479008 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.02
SMARCAL1-211ENST00000479008 KDM5BQ9UGL1 1544 aa21.43■■□□□ 1.02
SMARCAL1-211ENST00000479008 ATP10BO94823 1461 aa21.42■■□□□ 1.02
SMARCAL1-211ENST00000479008 TIAM1Q13009 1591 aa21.42■■□□□ 1.02
SMARCAL1-211ENST00000479008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.4■■□□□ 1.02
SMARCAL1-211ENST00000479008 APLP2Q06481 763 aa21.4■■□□□ 1.02
SMARCAL1-211ENST00000479008 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
SMARCAL1-211ENST00000479008 MAP3K1Q13233 1512 aa21.38■■□□□ 1.01
SMARCAL1-211ENST00000479008 NPM1P06748 294 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMARCAL1-211ENST00000479008 MAGI3Q5TCQ9 1506 aa21.31■■□□□ 1
SMARCAL1-211ENST00000479008 CDK11AQ9UQ88 783 aaPredicted RBP21.3■■□□□ 1
SMARCAL1-211ENST00000479008 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
SMARCAL1-211ENST00000479008 EHBP1L1Q8N3D4 1523 aa21.29■■□□□ 1
SMARCAL1-211ENST00000479008 MTUS2Q5JR59 1369 aa21.27■■□□□ 1
SMARCAL1-211ENST00000479008 PLEKHD1A6NEE1 506 aa21.27■■□□□ 1
SMARCAL1-211ENST00000479008 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
SMARCAL1-211ENST00000479008 MAPKBP1O60336 1514 aa21.27■■□□□ 1
SMARCAL1-211ENST00000479008 ASXL2Q76L83 1435 aa21.27■■□□□ 1
SMARCAL1-211ENST00000479008 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
SMARCAL1-211ENST00000479008 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
SMARCAL1-211ENST00000479008 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
SMARCAL1-211ENST00000479008 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
SMARCAL1-211ENST00000479008 KIF14Q15058 1648 aa21.22■□□□□ 0.99
SMARCAL1-211ENST00000479008 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
SMARCAL1-211ENST00000479008 NCOA2Q15596 1464 aa21.14■□□□□ 0.98
SMARCAL1-211ENST00000479008 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
SMARCAL1-211ENST00000479008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
SMARCAL1-211ENST00000479008 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
SMARCAL1-211ENST00000479008 KIF13AQ9H1H9 1805 aa21.11■□□□□ 0.97
SMARCAL1-211ENST00000479008 ABCC10Q5T3U5 1492 aa21.11■□□□□ 0.97
SMARCAL1-211ENST00000479008 ABCA9Q8IUA7 1624 aa21.11■□□□□ 0.97
SMARCAL1-211ENST00000479008 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
SMARCAL1-211ENST00000479008 MYO5CQ9NQX4 1742 aa21.09■□□□□ 0.97
SMARCAL1-211ENST00000479008 GLI2P10070 1586 aa21.08■□□□□ 0.97
SMARCAL1-211ENST00000479008 ITSN2Q9NZM3 1697 aa21.08■□□□□ 0.96
SMARCAL1-211ENST00000479008 PHLDB1Q86UU1 1377 aa21.05■□□□□ 0.96
SMARCAL1-211ENST00000479008 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
SMARCAL1-211ENST00000479008 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
SMARCAL1-211ENST00000479008 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
SMARCAL1-211ENST00000479008 CDC42BPBQ9Y5S2 1711 aa21.04■□□□□ 0.96
SMARCAL1-211ENST00000479008 FAM69CQ0P6D2 419 aa21.03■□□□□ 0.96
SMARCAL1-211ENST00000479008 GPATCH8Q9UKJ3 1502 aaKnown RBP21.02■□□□□ 0.96
SMARCAL1-211ENST00000479008 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.96
SMARCAL1-211ENST00000479008 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
SMARCAL1-211ENST00000479008 CD109Q6YHK3 1445 aa20.99■□□□□ 0.95
SMARCAL1-211ENST00000479008 ARHGAP5Q13017 1502 aa20.98■□□□□ 0.95
SMARCAL1-211ENST00000479008 PLCH2O75038 1416 aa20.97■□□□□ 0.95
SMARCAL1-211ENST00000479008 ARAP3Q8WWN8 1544 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms