RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
NUDCD3-207ENST00000478769 EHMT2Q96KQ7 1210 aa22.27■■□□□ 1.16
NUDCD3-207ENST00000478769 IQGAP2Q13576 1575 aa22.26■■□□□ 1.15
NUDCD3-207ENST00000478769 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
NUDCD3-207ENST00000478769 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
NUDCD3-207ENST00000478769 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
NUDCD3-207ENST00000478769 UBTFP17480 764 aaKnown RBP22.14■■□□□ 1.13
NUDCD3-207ENST00000478769 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
NUDCD3-207ENST00000478769 JPH4Q96JJ6 628 aa22.13■■□□□ 1.13
NUDCD3-207ENST00000478769 DNAJC5Q9H3Z4 198 aa22.13■■□□□ 1.13
NUDCD3-207ENST00000478769 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
NUDCD3-207ENST00000478769 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
NUDCD3-207ENST00000478769 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
NUDCD3-207ENST00000478769 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
NUDCD3-207ENST00000478769 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
NUDCD3-207ENST00000478769 DISP1Q96F81 1524 aa22.09■■□□□ 1.13
NUDCD3-207ENST00000478769 TNIKQ9UKE5 1360 aa22.08■■□□□ 1.12
NUDCD3-207ENST00000478769 KIAA0556O60303 1618 aa22.06■■□□□ 1.12
NUDCD3-207ENST00000478769 SAMD9Q5K651 1589 aa22.05■■□□□ 1.12
NUDCD3-207ENST00000478769 CARMIL2Q6F5E8 1435 aa22.01■■□□□ 1.11
NUDCD3-207ENST00000478769 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
NUDCD3-207ENST00000478769 ARAP1Q96P48 1450 aa22■■□□□ 1.11
NUDCD3-207ENST00000478769 EFCAB5A4FU69 1503 aa22■■□□□ 1.11
NUDCD3-207ENST00000478769 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
NUDCD3-207ENST00000478769 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
NUDCD3-207ENST00000478769 CLIP1P30622 1438 aa21.92■■□□□ 1.1
NUDCD3-207ENST00000478769 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
NUDCD3-207ENST00000478769 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
NUDCD3-207ENST00000478769 PTPRGP23470 1445 aa21.88■■□□□ 1.09
NUDCD3-207ENST00000478769 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
NUDCD3-207ENST00000478769 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
NUDCD3-207ENST00000478769 PLB1Q6P1J6 1458 aa21.79■■□□□ 1.08
NUDCD3-207ENST00000478769 ABCA8O94911 1581 aa21.78■■□□□ 1.08
NUDCD3-207ENST00000478769 ADCY10Q96PN6 1610 aa21.78■■□□□ 1.08
NUDCD3-207ENST00000478769 UACAQ9BZF9 1416 aa21.76■■□□□ 1.07
NUDCD3-207ENST00000478769 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
NUDCD3-207ENST00000478769 FMN1Q68DA7 1419 aa21.74■■□□□ 1.07
NUDCD3-207ENST00000478769 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
NUDCD3-207ENST00000478769 UHRF1BP1LA0JNW5 1464 aa21.74■■□□□ 1.07
NUDCD3-207ENST00000478769 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
NUDCD3-207ENST00000478769 NUP153P49790 1475 aaKnown RBP21.68■■□□□ 1.06
NUDCD3-207ENST00000478769 HECW1Q76N89 1606 aa21.65■■□□□ 1.06
NUDCD3-207ENST00000478769 CASKIN1Q8WXD9 1431 aa21.64■■□□□ 1.06
NUDCD3-207ENST00000478769 KDM5BQ9UGL1 1544 aa21.64■■□□□ 1.05
NUDCD3-207ENST00000478769 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
NUDCD3-207ENST00000478769 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
NUDCD3-207ENST00000478769 ZCCHC11Q5TAX3 1644 aaKnown RBP21.62■■□□□ 1.05
NUDCD3-207ENST00000478769 LRRIQ1Q96JM4 1722 aa21.6■■□□□ 1.05
NUDCD3-207ENST00000478769 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
NUDCD3-207ENST00000478769 ATP10BO94823 1461 aa21.58■■□□□ 1.04
NUDCD3-207ENST00000478769 CDK13Q14004 1512 aaKnown RBP21.57■■□□□ 1.04
NUDCD3-207ENST00000478769 EPRSP07814 1512 aaKnown RBP21.56■■□□□ 1.04
NUDCD3-207ENST00000478769 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
NUDCD3-207ENST00000478769 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
NUDCD3-207ENST00000478769 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.03
NUDCD3-207ENST00000478769 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
NUDCD3-207ENST00000478769 ASXL2Q76L83 1435 aa21.49■■□□□ 1.03
NUDCD3-207ENST00000478769 CFAP43Q8NDM7 1665 aa21.47■■□□□ 1.03
NUDCD3-207ENST00000478769 WDR7Q9Y4E6 1490 aa21.45■■□□□ 1.03
NUDCD3-207ENST00000478769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
NUDCD3-207ENST00000478769 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
NUDCD3-207ENST00000478769 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
NUDCD3-207ENST00000478769 MAGI3Q5TCQ9 1506 aa21.43■■□□□ 1.02
NUDCD3-207ENST00000478769 DIP2BQ9P265 1576 aa21.4■■□□□ 1.02
NUDCD3-207ENST00000478769 MAP3K1Q13233 1512 aa21.38■■□□□ 1.01
NUDCD3-207ENST00000478769 ABCC10Q5T3U5 1492 aa21.38■■□□□ 1.01
NUDCD3-207ENST00000478769 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
NUDCD3-207ENST00000478769 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
NUDCD3-207ENST00000478769 PLEKHD1A6NEE1 506 aa21.34■■□□□ 1.01
NUDCD3-207ENST00000478769 EHBP1L1Q8N3D4 1523 aa21.34■■□□□ 1.01
NUDCD3-207ENST00000478769 KIF14Q15058 1648 aa21.33■■□□□ 1.01
NUDCD3-207ENST00000478769 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1.01
NUDCD3-207ENST00000478769 GLI2P10070 1586 aa21.32■■□□□ 1
NUDCD3-207ENST00000478769 LRRC9Q6ZRR7 1453 aa21.31■■□□□ 1
NUDCD3-207ENST00000478769 KCNH8Q96L42 1107 aa21.3■■□□□ 1
NUDCD3-207ENST00000478769 MTUS2Q5JR59 1369 aa21.3■■□□□ 1
NUDCD3-207ENST00000478769 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
NUDCD3-207ENST00000478769 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
NUDCD3-207ENST00000478769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.28■■□□□ 1
NUDCD3-207ENST00000478769 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
NUDCD3-207ENST00000478769 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
NUDCD3-207ENST00000478769 APLP2Q06481 763 aa21.26■□□□□ 0.99
NUDCD3-207ENST00000478769 FAM69CQ0P6D2 419 aa21.26■□□□□ 0.99
NUDCD3-207ENST00000478769 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
NUDCD3-207ENST00000478769 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
NUDCD3-207ENST00000478769 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
NUDCD3-207ENST00000478769 PPRC1Q5VV67 1664 aaKnown RBP21.19■□□□□ 0.98
NUDCD3-207ENST00000478769 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
NUDCD3-207ENST00000478769 MYO5CQ9NQX4 1742 aa21.16■□□□□ 0.98
NUDCD3-207ENST00000478769 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
NUDCD3-207ENST00000478769 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
NUDCD3-207ENST00000478769 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
NUDCD3-207ENST00000478769 ARAP3Q8WWN8 1544 aa21.12■□□□□ 0.97
NUDCD3-207ENST00000478769 GPATCH8Q9UKJ3 1502 aaKnown RBP21.12■□□□□ 0.97
NUDCD3-207ENST00000478769 PLCH2O75038 1416 aa21.12■□□□□ 0.97
NUDCD3-207ENST00000478769 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
NUDCD3-207ENST00000478769 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
NUDCD3-207ENST00000478769 CDC42BPBQ9Y5S2 1711 aa21.1■□□□□ 0.97
NUDCD3-207ENST00000478769 ITSN2Q9NZM3 1697 aa21.1■□□□□ 0.97
NUDCD3-207ENST00000478769 PHLDB1Q86UU1 1377 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms