RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
CYTH3-206ENST00000478541 JPH4Q96JJ6 628 aa27.35■■□□□ 1.97
CYTH3-206ENST00000478541 PRG4Q92954 1404 aaPredicted RBP27.34■■□□□ 1.97
CYTH3-206ENST00000478541 RAPGEF2Q9Y4G8 1499 aa27.23■■□□□ 1.95
CYTH3-206ENST00000478541 IQGAP2Q13576 1575 aa27.18■■□□□ 1.94
CYTH3-206ENST00000478541 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
CYTH3-206ENST00000478541 PRXQ9BXM0 1461 aa27.08■■□□□ 1.93
CYTH3-206ENST00000478541 CARMIL2Q6F5E8 1435 aa27.06■■□□□ 1.92
CYTH3-206ENST00000478541 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
CYTH3-206ENST00000478541 UGGT2Q9NYU1 1516 aa27.03■■□□□ 1.92
CYTH3-206ENST00000478541 ADCY10Q96PN6 1610 aa27.01■■□□□ 1.91
CYTH3-206ENST00000478541 DISP1Q96F81 1524 aa27■■□□□ 1.91
CYTH3-206ENST00000478541 TNIKQ9UKE5 1360 aa26.98■■□□□ 1.91
CYTH3-206ENST00000478541 EEA1Q15075 1411 aa26.98■■□□□ 1.91
CYTH3-206ENST00000478541 PTPRGP23470 1445 aa26.97■■□□□ 1.91
CYTH3-206ENST00000478541 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
CYTH3-206ENST00000478541 KIAA0556O60303 1618 aa26.93■■□□□ 1.9
CYTH3-206ENST00000478541 MAPKBP1O60336 1514 aa26.91■■□□□ 1.9
CYTH3-206ENST00000478541 NPM1P06748 294 aaKnown RBP eCLIP26.9■■□□□ 1.9
CYTH3-206ENST00000478541 KIF13AQ9H1H9 1805 aa26.88■■□□□ 1.89
CYTH3-206ENST00000478541 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
CYTH3-206ENST00000478541 UHRF1BP1LA0JNW5 1464 aa26.84■■□□□ 1.89
CYTH3-206ENST00000478541 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
CYTH3-206ENST00000478541 TTBK1Q5TCY1 1321 aaPredicted RBP26.81■■□□□ 1.88
CYTH3-206ENST00000478541 UACAQ9BZF9 1416 aa26.81■■□□□ 1.88
CYTH3-206ENST00000478541 ABCC2Q92887 1545 aa26.8■■□□□ 1.88
CYTH3-206ENST00000478541 ABCC10Q5T3U5 1492 aa26.8■■□□□ 1.88
CYTH3-206ENST00000478541 DIP2BQ9P265 1576 aa26.76■■□□□ 1.87
CYTH3-206ENST00000478541 KIF21BO75037 1637 aa26.74■■□□□ 1.87
CYTH3-206ENST00000478541 FAM9AQ8IZU1 332 aaPredicted RBP26.71■■□□□ 1.87
CYTH3-206ENST00000478541 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.87
CYTH3-206ENST00000478541 SAMD9Q5K651 1589 aa26.68■■□□□ 1.86
CYTH3-206ENST00000478541 FAM69CQ0P6D2 419 aa26.68■■□□□ 1.86
CYTH3-206ENST00000478541 ZCCHC11Q5TAX3 1644 aaKnown RBP26.65■■□□□ 1.86
CYTH3-206ENST00000478541 PLB1Q6P1J6 1458 aa26.65■■□□□ 1.86
CYTH3-206ENST00000478541 ABCA8O94911 1581 aa26.65■■□□□ 1.86
CYTH3-206ENST00000478541 ASXL2Q76L83 1435 aa26.65■■□□□ 1.86
CYTH3-206ENST00000478541 GLI2P10070 1586 aa26.58■■□□□ 1.85
CYTH3-206ENST00000478541 TSPOAP1O95153 1857 aa26.52■■□□□ 1.84
CYTH3-206ENST00000478541 P3H3Q8IVL6 736 aa26.52■■□□□ 1.84
CYTH3-206ENST00000478541 EPRSP07814 1512 aaKnown RBP26.5■■□□□ 1.83
CYTH3-206ENST00000478541 EFCAB5A4FU69 1503 aa26.49■■□□□ 1.83
CYTH3-206ENST00000478541 WDR7Q9Y4E6 1490 aa26.48■■□□□ 1.83
CYTH3-206ENST00000478541 RAPGEF6Q8TEU7 1601 aa26.46■■□□□ 1.83
CYTH3-206ENST00000478541 PPRC1Q5VV67 1664 aaKnown RBP26.45■■□□□ 1.82
CYTH3-206ENST00000478541 MAP3K4Q9Y6R4 1608 aa26.45■■□□□ 1.82
CYTH3-206ENST00000478541 FHOD3Q2V2M9 1422 aa26.42■■□□□ 1.82
CYTH3-206ENST00000478541 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
CYTH3-206ENST00000478541 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
CYTH3-206ENST00000478541 ATP10BO94823 1461 aa26.39■■□□□ 1.82
CYTH3-206ENST00000478541 KDM6BO15054 1643 aa26.39■■□□□ 1.81
CYTH3-206ENST00000478541 CFAP43Q8NDM7 1665 aa26.34■■□□□ 1.81
CYTH3-206ENST00000478541 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
CYTH3-206ENST00000478541 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
CYTH3-206ENST00000478541 TEX14Q8IWB6 1497 aa26.31■■□□□ 1.8
CYTH3-206ENST00000478541 ARHGAP35Q9NRY4 1499 aa26.29■■□□□ 1.8
CYTH3-206ENST00000478541 ARID3CA6NKF2 412 aa26.27■■□□□ 1.8
CYTH3-206ENST00000478541 KCNH8Q96L42 1107 aa26.26■■□□□ 1.79
CYTH3-206ENST00000478541 MAGI3Q5TCQ9 1506 aa26.25■■□□□ 1.79
CYTH3-206ENST00000478541 CD109Q6YHK3 1445 aa26.24■■□□□ 1.79
CYTH3-206ENST00000478541 FMN1Q68DA7 1419 aa26.22■■□□□ 1.79
CYTH3-206ENST00000478541 ABCA9Q8IUA7 1624 aa26.21■■□□□ 1.79
CYTH3-206ENST00000478541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.18■■□□□ 1.78
CYTH3-206ENST00000478541 HNRNPUL2Q1KMD3 747 aaKnown RBP26.18■■□□□ 1.78
CYTH3-206ENST00000478541 COL17A1Q9UMD9 1497 aaPredicted RBP26.17■■□□□ 1.78
CYTH3-206ENST00000478541 HECW1Q76N89 1606 aa26.15■■□□□ 1.78
CYTH3-206ENST00000478541 PLEKHD1A6NEE1 506 aa26.11■■□□□ 1.77
CYTH3-206ENST00000478541 CDK13Q14004 1512 aaKnown RBP26.1■■□□□ 1.77
CYTH3-206ENST00000478541 PHLDB1Q86UU1 1377 aa26.04■■□□□ 1.76
CYTH3-206ENST00000478541 ARAP3Q8WWN8 1544 aa26.04■■□□□ 1.76
CYTH3-206ENST00000478541 LRRIQ1Q96JM4 1722 aa26.03■■□□□ 1.76
CYTH3-206ENST00000478541 CLIP1P30622 1438 aa26.02■■□□□ 1.76
CYTH3-206ENST00000478541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.76
CYTH3-206ENST00000478541 NEO1Q92859 1461 aa26.01■■□□□ 1.75
CYTH3-206ENST00000478541 CASKIN1Q8WXD9 1431 aa25.99■■□□□ 1.75
CYTH3-206ENST00000478541 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
CYTH3-206ENST00000478541 PCF11O94913 1555 aaKnown RBP25.99■■□□□ 1.75
CYTH3-206ENST00000478541 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
CYTH3-206ENST00000478541 TTC37Q6PGP7 1564 aa25.98■■□□□ 1.75
CYTH3-206ENST00000478541 CDK11AQ9UQ88 783 aaPredicted RBP25.96■■□□□ 1.75
CYTH3-206ENST00000478541 CCDC18Q5T9S5 1454 aa25.93■■□□□ 1.74
CYTH3-206ENST00000478541 CFAP74Q9C0B2 1584 aa25.93■■□□□ 1.74
CYTH3-206ENST00000478541 FYCO1Q9BQS8 1478 aa25.92■■□□□ 1.74
CYTH3-206ENST00000478541 TROQ12816 1431 aaPredicted RBP25.9■■□□□ 1.74
CYTH3-206ENST00000478541 KIF14Q15058 1648 aa25.88■■□□□ 1.73
CYTH3-206ENST00000478541 FANCAO15360 1455 aa25.88■■□□□ 1.73
CYTH3-206ENST00000478541 MYO5CQ9NQX4 1742 aa25.86■■□□□ 1.73
CYTH3-206ENST00000478541 KDM4FA0A1W2PPD8 638 aa25.86■■□□□ 1.73
CYTH3-206ENST00000478541 PLCH2O75038 1416 aa25.85■■□□□ 1.73
CYTH3-206ENST00000478541 AKNAQ7Z591 1439 aa25.85■■□□□ 1.73
CYTH3-206ENST00000478541 FRMPD1Q5SYB0 1578 aa25.85■■□□□ 1.73
CYTH3-206ENST00000478541 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
CYTH3-206ENST00000478541 RICTORQ6R327 1708 aa25.82■■□□□ 1.72
CYTH3-206ENST00000478541 ADGRL1O94910 1474 aa25.8■■□□□ 1.72
CYTH3-206ENST00000478541 RAPGEF3O95398 923 aa25.8■■□□□ 1.72
CYTH3-206ENST00000478541 DENND4BO75064 1496 aaPredicted RBP25.79■■□□□ 1.72
CYTH3-206ENST00000478541 ZMYM4Q5VZL5 1548 aa25.73■■□□□ 1.71
CYTH3-206ENST00000478541 CDC42BPBQ9Y5S2 1711 aa25.72■■□□□ 1.71
CYTH3-206ENST00000478541 EFCAB2Q5VUJ9 269 aa25.72■■□□□ 1.71
CYTH3-206ENST00000478541 PREX2Q70Z35 1606 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms