RNA–Protein interactions for RNA: ENST00000478499.3

RN7SL259P-201, Transcript of RNA, 7SL, cytoplasmic 259, pseudogene, humanhuman

BASIC

Gene RN7SL259P, Length 253 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL259P-201ENST00000478499 COL17A1Q9UMD9 1497 aaPredicted RBP13.51□□□□□ -0.25
RN7SL259P-201ENST00000478499 CERKQ8TCT0 537 aa13.49□□□□□ -0.25
RN7SL259P-201ENST00000478499 TSPOAP1O95153 1857 aa13.48□□□□□ -0.25
RN7SL259P-201ENST00000478499 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
RN7SL259P-201ENST00000478499 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
RN7SL259P-201ENST00000478499 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
RN7SL259P-201ENST00000478499 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
RN7SL259P-201ENST00000478499 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
RN7SL259P-201ENST00000478499 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
RN7SL259P-201ENST00000478499 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
RN7SL259P-201ENST00000478499 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
RN7SL259P-201ENST00000478499 GLI2P10070 1586 aa13.39□□□□□ -0.27
RN7SL259P-201ENST00000478499 CCDC88BA6NC98 1476 aa13.37□□□□□ -0.27
RN7SL259P-201ENST00000478499 PTPRMP28827 1452 aa13.35□□□□□ -0.27
RN7SL259P-201ENST00000478499 ABCA5Q8WWZ7 1642 aa13.34□□□□□ -0.27
RN7SL259P-201ENST00000478499 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
RN7SL259P-201ENST00000478499 TEX14Q8IWB6 1497 aa13.26□□□□□ -0.29
RN7SL259P-201ENST00000478499 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
RN7SL259P-201ENST00000478499 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
RN7SL259P-201ENST00000478499 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
RN7SL259P-201ENST00000478499 CUX1P39880 1505 aa13.24□□□□□ -0.29
RN7SL259P-201ENST00000478499 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
RN7SL259P-201ENST00000478499 MAP3K4Q9Y6R4 1608 aa13.23□□□□□ -0.29
RN7SL259P-201ENST00000478499 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
RN7SL259P-201ENST00000478499 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
RN7SL259P-201ENST00000478499 KIF21BO75037 1637 aa13.2□□□□□ -0.3
RN7SL259P-201ENST00000478499 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
RN7SL259P-201ENST00000478499 KIAA0586Q9BVV6 1533 aa13.18□□□□□ -0.3
RN7SL259P-201ENST00000478499 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
RN7SL259P-201ENST00000478499 EPRSP07814 1512 aaKnown RBP13.16□□□□□ -0.3
RN7SL259P-201ENST00000478499 HSPA2P54652 639 aa13.15□□□□□ -0.3
RN7SL259P-201ENST00000478499 IQSEC2Q5JU85 1478 aa13.1□□□□□ -0.31
RN7SL259P-201ENST00000478499 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
RN7SL259P-201ENST00000478499 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
RN7SL259P-201ENST00000478499 ERICH3Q5RHP9 1530 aa13.05□□□□□ -0.32
RN7SL259P-201ENST00000478499 BCORL1Q5H9F3 1711 aa13.05□□□□□ -0.32
RN7SL259P-201ENST00000478499 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
RN7SL259P-201ENST00000478499 MAGI3Q5TCQ9 1506 aa13.04□□□□□ -0.32
RN7SL259P-201ENST00000478499 PTPRGP23470 1445 aa13.01□□□□□ -0.33
RN7SL259P-201ENST00000478499 LTBP4Q8N2S1 1624 aa13□□□□□ -0.33
RN7SL259P-201ENST00000478499 YEATS2Q9ULM3 1422 aa13□□□□□ -0.33
RN7SL259P-201ENST00000478499 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
RN7SL259P-201ENST00000478499 CUL7Q14999 1698 aa12.99□□□□□ -0.33
RN7SL259P-201ENST00000478499 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
RN7SL259P-201ENST00000478499 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
RN7SL259P-201ENST00000478499 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
RN7SL259P-201ENST00000478499 PTPRTO14522 1441 aa12.93□□□□□ -0.34
RN7SL259P-201ENST00000478499 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
RN7SL259P-201ENST00000478499 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
RN7SL259P-201ENST00000478499 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
RN7SL259P-201ENST00000478499 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
RN7SL259P-201ENST00000478499 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
RN7SL259P-201ENST00000478499 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
RN7SL259P-201ENST00000478499 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
RN7SL259P-201ENST00000478499 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
RN7SL259P-201ENST00000478499 ZCCHC11Q5TAX3 1644 aaKnown RBP12.87□□□□□ -0.35
RN7SL259P-201ENST00000478499 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.36
RN7SL259P-201ENST00000478499 TTC37Q6PGP7 1564 aa12.82□□□□□ -0.36
RN7SL259P-201ENST00000478499 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
RN7SL259P-201ENST00000478499 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
RN7SL259P-201ENST00000478499 PHLDB1Q86UU1 1377 aa12.8□□□□□ -0.36
RN7SL259P-201ENST00000478499 CARMIL2Q6F5E8 1435 aa12.79□□□□□ -0.36
RN7SL259P-201ENST00000478499 ARHGEF40Q8TER5 1519 aa12.79□□□□□ -0.36
RN7SL259P-201ENST00000478499 FRMPD1Q5SYB0 1578 aa12.79□□□□□ -0.36
RN7SL259P-201ENST00000478499 PHF23Q9BUL5 403 aaPredicted RBP12.79□□□□□ -0.36
RN7SL259P-201ENST00000478499 HSPA1LP34931 641 aa12.78□□□□□ -0.36
RN7SL259P-201ENST00000478499 TTBK1Q5TCY1 1321 aaPredicted RBP12.76□□□□□ -0.37
RN7SL259P-201ENST00000478499 RAPGEF3O95398 923 aa12.74□□□□□ -0.37
RN7SL259P-201ENST00000478499 POGZQ7Z3K3 1410 aa12.73□□□□□ -0.37
RN7SL259P-201ENST00000478499 PLPPR3Q6T4P5 718 aa12.72□□□□□ -0.37
RN7SL259P-201ENST00000478499 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
RN7SL259P-201ENST00000478499 FANCAO15360 1455 aa12.72□□□□□ -0.37
RN7SL259P-201ENST00000478499 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.37
RN7SL259P-201ENST00000478499 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.37
RN7SL259P-201ENST00000478499 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
RN7SL259P-201ENST00000478499 NEO1Q92859 1461 aa12.69□□□□□ -0.38
RN7SL259P-201ENST00000478499 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
RN7SL259P-201ENST00000478499 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
RN7SL259P-201ENST00000478499 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
RN7SL259P-201ENST00000478499 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
RN7SL259P-201ENST00000478499 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
RN7SL259P-201ENST00000478499 AKNAQ7Z591 1439 aa12.63□□□□□ -0.39
RN7SL259P-201ENST00000478499 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
RN7SL259P-201ENST00000478499 IQGAP2Q13576 1575 aa12.61□□□□□ -0.39
RN7SL259P-201ENST00000478499 ABCA9Q8IUA7 1624 aa12.6□□□□□ -0.39
RN7SL259P-201ENST00000478499 FHOD3Q2V2M9 1422 aa12.6□□□□□ -0.39
RN7SL259P-201ENST00000478499 ZMYM4Q5VZL5 1548 aa12.59□□□□□ -0.39
RN7SL259P-201ENST00000478499 CEBPAP49715 358 aaPredicted RBP12.58□□□□□ -0.4
RN7SL259P-201ENST00000478499 IGF1RP08069 1367 aa12.57□□□□□ -0.4
RN7SL259P-201ENST00000478499 RICTORQ6R327 1708 aa12.56□□□□□ -0.4
RN7SL259P-201ENST00000478499 ZFYVE16Q7Z3T8 1539 aa12.55□□□□□ -0.4
RN7SL259P-201ENST00000478499 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
RN7SL259P-201ENST00000478499 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
RN7SL259P-201ENST00000478499 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
RN7SL259P-201ENST00000478499 DENND4BO75064 1496 aaPredicted RBP12.54□□□□□ -0.4
RN7SL259P-201ENST00000478499 EFCAB5A4FU69 1503 aa12.54□□□□□ -0.4
RN7SL259P-201ENST00000478499 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
RN7SL259P-201ENST00000478499 POTEAQ6S8J7 498 aa12.54□□□□□ -0.4
RN7SL259P-201ENST00000478499 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
RN7SL259P-201ENST00000478499 ABCA8O94911 1581 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms