RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 RBM19Q9Y4C8 960 aaKnown RBP11.98□□□□□ -0.49
NELFCD-206ENST00000478389 NEFLP07196 543 aa11.98□□□□□ -0.49
NELFCD-206ENST00000478389 WIZO95785 1651 aa11.97□□□□□ -0.49
NELFCD-206ENST00000478389 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
NELFCD-206ENST00000478389 SMARCA2P51531 1590 aa11.96□□□□□ -0.49
NELFCD-206ENST00000478389 FBLN2P98095 1184 aa11.95□□□□□ -0.5
NELFCD-206ENST00000478389 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
NELFCD-206ENST00000478389 CDK11BP21127 795 aaKnown RBP11.94□□□□□ -0.5
NELFCD-206ENST00000478389 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
NELFCD-206ENST00000478389 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
NELFCD-206ENST00000478389 IRX6P78412 446 aaPredicted RBP11.93□□□□□ -0.5
NELFCD-206ENST00000478389 POLR3GLQ9BT43 218 aa11.92□□□□□ -0.5
NELFCD-206ENST00000478389 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
NELFCD-206ENST00000478389 IGSF3O75054 1194 aa11.91□□□□□ -0.5
NELFCD-206ENST00000478389 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
NELFCD-206ENST00000478389 FKBP8Q14318 412 aa11.89□□□□□ -0.51
NELFCD-206ENST00000478389 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
NELFCD-206ENST00000478389 A0A0U1RQG5 324 aaPredicted RBP11.86□□□□□ -0.51
NELFCD-206ENST00000478389 BRD2P25440 801 aaKnown RBP11.86□□□□□ -0.51
NELFCD-206ENST00000478389 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
NELFCD-206ENST00000478389 TNIKQ9UKE5 1360 aa11.85□□□□□ -0.51
NELFCD-206ENST00000478389 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
NELFCD-206ENST00000478389 MSH5O43196 834 aa11.8□□□□□ -0.52
NELFCD-206ENST00000478389 DEKP35659 375 aaKnown RBP11.8□□□□□ -0.52
NELFCD-206ENST00000478389 ZBTB22O15209 634 aa11.8□□□□□ -0.52
NELFCD-206ENST00000478389 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
NELFCD-206ENST00000478389 HMGXB3Q12766 1538 aa11.78□□□□□ -0.52
NELFCD-206ENST00000478389 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.52
NELFCD-206ENST00000478389 ARID3AQ99856 593 aa11.77□□□□□ -0.52
NELFCD-206ENST00000478389 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.53
NELFCD-206ENST00000478389 NESP48681 1621 aa11.76□□□□□ -0.53
NELFCD-206ENST00000478389 EEA1Q15075 1411 aa11.75□□□□□ -0.53
NELFCD-206ENST00000478389 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
NELFCD-206ENST00000478389 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
NELFCD-206ENST00000478389 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
NELFCD-206ENST00000478389 FGD1P98174 961 aa11.73□□□□□ -0.53
NELFCD-206ENST00000478389 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
NELFCD-206ENST00000478389 ITGAEP38570 1179 aa11.69□□□□□ -0.54
NELFCD-206ENST00000478389 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
NELFCD-206ENST00000478389 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
NELFCD-206ENST00000478389 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
NELFCD-206ENST00000478389 GOLGA3Q08378 1498 aa11.67□□□□□ -0.54
NELFCD-206ENST00000478389 RTL5Q5HYW3 569 aaPredicted RBP11.63□□□□□ -0.55
NELFCD-206ENST00000478389 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
NELFCD-206ENST00000478389 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.63□□□□□ -0.55
NELFCD-206ENST00000478389 KCNH8Q96L42 1107 aa11.63□□□□□ -0.55
NELFCD-206ENST00000478389 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
NELFCD-206ENST00000478389 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
NELFCD-206ENST00000478389 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
NELFCD-206ENST00000478389 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
NELFCD-206ENST00000478389 VPS8Q8N3P4 1428 aa11.59□□□□□ -0.55
NELFCD-206ENST00000478389 SOGA1O94964 1423 aa11.58□□□□□ -0.56
NELFCD-206ENST00000478389 CFTRP13569 1480 aa11.57□□□□□ -0.56
NELFCD-206ENST00000478389 ANP32CO43423 234 aa11.57□□□□□ -0.56
NELFCD-206ENST00000478389 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
NELFCD-206ENST00000478389 CLIP1P30622 1438 aa11.56□□□□□ -0.56
NELFCD-206ENST00000478389 TRIM52Q96A61 297 aa11.55□□□□□ -0.56
NELFCD-206ENST00000478389 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
NELFCD-206ENST00000478389 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
NELFCD-206ENST00000478389 NBR1Q14596 966 aa11.54□□□□□ -0.56
NELFCD-206ENST00000478389 DDX10Q13206 875 aaKnown RBP11.53□□□□□ -0.56
NELFCD-206ENST00000478389 ZNF428Q96B54 188 aa11.53□□□□□ -0.56
NELFCD-206ENST00000478389 PPP4R2Q9NY27 417 aa11.53□□□□□ -0.56
NELFCD-206ENST00000478389 ADRA2BP18089 450 aa11.52□□□□□ -0.56
NELFCD-206ENST00000478389 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
NELFCD-206ENST00000478389 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
NELFCD-206ENST00000478389 NAP1L5Q96NT1 182 aaPredicted RBP11.51□□□□□ -0.57
NELFCD-206ENST00000478389 BRPF3Q9ULD4 1205 aa11.5□□□□□ -0.57
NELFCD-206ENST00000478389 ANP32AP39687 249 aaKnown RBP11.49□□□□□ -0.57
NELFCD-206ENST00000478389 CCDC9Q9Y3X0 531 aaKnown RBP11.47□□□□□ -0.57
NELFCD-206ENST00000478389 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.57
NELFCD-206ENST00000478389 CUX2O14529 1486 aa11.46□□□□□ -0.57
NELFCD-206ENST00000478389 KIF21BO75037 1637 aa11.46□□□□□ -0.57
NELFCD-206ENST00000478389 SYNJ1O43426 1573 aa11.46□□□□□ -0.58
NELFCD-206ENST00000478389 MRC2Q9UBG0 1479 aa11.45□□□□□ -0.58
NELFCD-206ENST00000478389 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
NELFCD-206ENST00000478389 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
NELFCD-206ENST00000478389 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
NELFCD-206ENST00000478389 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
NELFCD-206ENST00000478389 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
NELFCD-206ENST00000478389 AAMPQ13685 434 aa11.42□□□□□ -0.58
NELFCD-206ENST00000478389 PRDM10Q9NQV6 1147 aa11.42□□□□□ -0.58
NELFCD-206ENST00000478389 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
NELFCD-206ENST00000478389 KIF21AQ7Z4S6 1674 aa11.41□□□□□ -0.58
NELFCD-206ENST00000478389 PAK3O75914 559 aaPredicted RBP11.41□□□□□ -0.58
NELFCD-206ENST00000478389 ZNF526Q8TF50 670 aaPredicted RBP11.41□□□□□ -0.58
NELFCD-206ENST00000478389 RRBP1Q9P2E9 1410 aaKnown RBP11.4□□□□□ -0.58
NELFCD-206ENST00000478389 NECTIN2Q92692 538 aa11.4□□□□□ -0.58
NELFCD-206ENST00000478389 TDRD9Q8NDG6 1382 aaKnown RBP11.4□□□□□ -0.59
NELFCD-206ENST00000478389 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
NELFCD-206ENST00000478389 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
NELFCD-206ENST00000478389 ATP1B4Q9UN42 357 aaPredicted RBP11.39□□□□□ -0.59
NELFCD-206ENST00000478389 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
NELFCD-206ENST00000478389 HIRIP3Q9BW71 556 aaPredicted RBP11.37□□□□□ -0.59
NELFCD-206ENST00000478389 WASHC2AQ641Q2 1341 aa11.37□□□□□ -0.59
NELFCD-206ENST00000478389 ZNF592Q92610 1267 aa11.37□□□□□ -0.59
NELFCD-206ENST00000478389 TOPBP1Q92547 1522 aa11.36□□□□□ -0.59
NELFCD-206ENST00000478389 RBM10P98175 930 aaKnown RBP11.36□□□□□ -0.59
NELFCD-206ENST00000478389 TMED8Q6PL24 325 aaPredicted RBP11.35□□□□□ -0.59
NELFCD-206ENST00000478389 CCNB3Q8WWL7 1395 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms