RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 KIAA0586Q9BVV6 1533 aa27.51■■□□□ 1.99
PDZRN3-207ENST00000478209 ARAP1Q96P48 1450 aa27.51■■□□□ 1.99
PDZRN3-207ENST00000478209 CYB5RLQ6IPT4 315 aa27.45■■□□□ 1.98
PDZRN3-207ENST00000478209 JPH4Q96JJ6 628 aa27.45■■□□□ 1.98
PDZRN3-207ENST00000478209 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
PDZRN3-207ENST00000478209 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
PDZRN3-207ENST00000478209 ERCC6L2Q5T890 1561 aa27.41■■□□□ 1.98
PDZRN3-207ENST00000478209 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
PDZRN3-207ENST00000478209 IQGAP2Q13576 1575 aa27.37■■□□□ 1.97
PDZRN3-207ENST00000478209 FAM9AQ8IZU1 332 aaPredicted RBP27.37■■□□□ 1.97
PDZRN3-207ENST00000478209 CTTNBP2Q8WZ74 1663 aa27.3■■□□□ 1.96
PDZRN3-207ENST00000478209 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
PDZRN3-207ENST00000478209 KIF21BO75037 1637 aa27.22■■□□□ 1.95
PDZRN3-207ENST00000478209 UGGT2Q9NYU1 1516 aa27.21■■□□□ 1.95
PDZRN3-207ENST00000478209 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
PDZRN3-207ENST00000478209 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
PDZRN3-207ENST00000478209 KIAA0556O60303 1618 aa27.11■■□□□ 1.93
PDZRN3-207ENST00000478209 PTPRGP23470 1445 aa27.1■■□□□ 1.93
PDZRN3-207ENST00000478209 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
PDZRN3-207ENST00000478209 TTBK1Q5TCY1 1321 aaPredicted RBP27.06■■□□□ 1.92
PDZRN3-207ENST00000478209 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
PDZRN3-207ENST00000478209 UBTFP17480 764 aaKnown RBP26.99■■□□□ 1.91
PDZRN3-207ENST00000478209 ADCY10Q96PN6 1610 aa26.98■■□□□ 1.91
PDZRN3-207ENST00000478209 NPM1P06748 294 aaKnown RBP eCLIP26.94■■□□□ 1.9
PDZRN3-207ENST00000478209 SAMD9Q5K651 1589 aa26.93■■□□□ 1.9
PDZRN3-207ENST00000478209 UACAQ9BZF9 1416 aa26.91■■□□□ 1.9
PDZRN3-207ENST00000478209 TRHP20396 242 aaPredicted RBP26.91■■□□□ 1.9
PDZRN3-207ENST00000478209 RANGAP1P46060 587 aaPredicted RBP26.91■■□□□ 1.9
PDZRN3-207ENST00000478209 UHRF1BP1LA0JNW5 1464 aa26.89■■□□□ 1.9
PDZRN3-207ENST00000478209 P3H3Q8IVL6 736 aa26.88■■□□□ 1.89
PDZRN3-207ENST00000478209 ABCC2Q92887 1545 aa26.87■■□□□ 1.89
PDZRN3-207ENST00000478209 EFCAB5A4FU69 1503 aa26.85■■□□□ 1.89
PDZRN3-207ENST00000478209 MAPKBP1O60336 1514 aa26.82■■□□□ 1.88
PDZRN3-207ENST00000478209 PLB1Q6P1J6 1458 aa26.81■■□□□ 1.88
PDZRN3-207ENST00000478209 ABCA8O94911 1581 aa26.8■■□□□ 1.88
PDZRN3-207ENST00000478209 FHOD3Q2V2M9 1422 aa26.78■■□□□ 1.88
PDZRN3-207ENST00000478209 KDM5BQ9UGL1 1544 aa26.75■■□□□ 1.87
PDZRN3-207ENST00000478209 ZCCHC11Q5TAX3 1644 aaKnown RBP26.71■■□□□ 1.87
PDZRN3-207ENST00000478209 ARHGAP35Q9NRY4 1499 aa26.69■■□□□ 1.86
PDZRN3-207ENST00000478209 RAPGEF6Q8TEU7 1601 aa26.68■■□□□ 1.86
PDZRN3-207ENST00000478209 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
PDZRN3-207ENST00000478209 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
PDZRN3-207ENST00000478209 KIF13AQ9H1H9 1805 aa26.65■■□□□ 1.86
PDZRN3-207ENST00000478209 DIP2BQ9P265 1576 aa26.63■■□□□ 1.85
PDZRN3-207ENST00000478209 FAM69CQ0P6D2 419 aa26.62■■□□□ 1.85
PDZRN3-207ENST00000478209 FMN1Q68DA7 1419 aa26.6■■□□□ 1.85
PDZRN3-207ENST00000478209 CLIP1P30622 1438 aa26.57■■□□□ 1.84
PDZRN3-207ENST00000478209 ARID3CA6NKF2 412 aa26.57■■□□□ 1.84
PDZRN3-207ENST00000478209 ATP10BO94823 1461 aa26.55■■□□□ 1.84
PDZRN3-207ENST00000478209 NUP153P49790 1475 aaKnown RBP26.55■■□□□ 1.84
PDZRN3-207ENST00000478209 WDR7Q9Y4E6 1490 aa26.55■■□□□ 1.84
PDZRN3-207ENST00000478209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.51■■□□□ 1.83
PDZRN3-207ENST00000478209 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
PDZRN3-207ENST00000478209 GLI2P10070 1586 aa26.5■■□□□ 1.83
PDZRN3-207ENST00000478209 EPRSP07814 1512 aaKnown RBP26.5■■□□□ 1.83
PDZRN3-207ENST00000478209 HECW1Q76N89 1606 aa26.48■■□□□ 1.83
PDZRN3-207ENST00000478209 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
PDZRN3-207ENST00000478209 CEP162Q5TB80 1403 aa26.46■■□□□ 1.83
PDZRN3-207ENST00000478209 ATP1B4Q9UN42 357 aaPredicted RBP26.45■■□□□ 1.82
PDZRN3-207ENST00000478209 KCNH8Q96L42 1107 aa26.42■■□□□ 1.82
PDZRN3-207ENST00000478209 TSPOAP1O95153 1857 aa26.41■■□□□ 1.82
PDZRN3-207ENST00000478209 PCF11O94913 1555 aaKnown RBP26.39■■□□□ 1.82
PDZRN3-207ENST00000478209 CDK13Q14004 1512 aaKnown RBP26.39■■□□□ 1.81
PDZRN3-207ENST00000478209 MAP3K4Q9Y6R4 1608 aa26.38■■□□□ 1.81
PDZRN3-207ENST00000478209 CASKIN1Q8WXD9 1431 aa26.38■■□□□ 1.81
PDZRN3-207ENST00000478209 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
PDZRN3-207ENST00000478209 CFAP43Q8NDM7 1665 aa26.34■■□□□ 1.81
PDZRN3-207ENST00000478209 FYCO1Q9BQS8 1478 aa26.33■■□□□ 1.81
PDZRN3-207ENST00000478209 PPRC1Q5VV67 1664 aaKnown RBP26.31■■□□□ 1.8
PDZRN3-207ENST00000478209 CCDC18Q5T9S5 1454 aa26.3■■□□□ 1.8
PDZRN3-207ENST00000478209 CDK11AQ9UQ88 783 aaPredicted RBP26.3■■□□□ 1.8
PDZRN3-207ENST00000478209 CD109Q6YHK3 1445 aa26.3■■□□□ 1.8
PDZRN3-207ENST00000478209 TEX14Q8IWB6 1497 aa26.3■■□□□ 1.8
PDZRN3-207ENST00000478209 ABCA9Q8IUA7 1624 aa26.28■■□□□ 1.8
PDZRN3-207ENST00000478209 LRRIQ1Q96JM4 1722 aa26.28■■□□□ 1.8
PDZRN3-207ENST00000478209 MAGI3Q5TCQ9 1506 aa26.24■■□□□ 1.79
PDZRN3-207ENST00000478209 KDM6BO15054 1643 aa26.23■■□□□ 1.79
PDZRN3-207ENST00000478209 TROQ12816 1431 aaPredicted RBP26.19■■□□□ 1.78
PDZRN3-207ENST00000478209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.17■■□□□ 1.78
PDZRN3-207ENST00000478209 KIF14Q15058 1648 aa26.15■■□□□ 1.78
PDZRN3-207ENST00000478209 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.78
PDZRN3-207ENST00000478209 TTC37Q6PGP7 1564 aa26.13■■□□□ 1.77
PDZRN3-207ENST00000478209 NEO1Q92859 1461 aa26.07■■□□□ 1.76
PDZRN3-207ENST00000478209 PHLDB1Q86UU1 1377 aa26.07■■□□□ 1.76
PDZRN3-207ENST00000478209 COL17A1Q9UMD9 1497 aaPredicted RBP26.04■■□□□ 1.76
PDZRN3-207ENST00000478209 CFAP74Q9C0B2 1584 aa26.04■■□□□ 1.76
PDZRN3-207ENST00000478209 MTUS2Q5JR59 1369 aa26.04■■□□□ 1.76
PDZRN3-207ENST00000478209 MYO5CQ9NQX4 1742 aa26.03■■□□□ 1.76
PDZRN3-207ENST00000478209 PLCH2O75038 1416 aa26.02■■□□□ 1.76
PDZRN3-207ENST00000478209 FANCAO15360 1455 aa26.02■■□□□ 1.76
PDZRN3-207ENST00000478209 ARAP3Q8WWN8 1544 aa26.01■■□□□ 1.75
PDZRN3-207ENST00000478209 EHBP1L1Q8N3D4 1523 aa25.99■■□□□ 1.75
PDZRN3-207ENST00000478209 TIAM1Q13009 1591 aa25.98■■□□□ 1.75
PDZRN3-207ENST00000478209 AKNAQ7Z591 1439 aa25.96■■□□□ 1.75
PDZRN3-207ENST00000478209 ARHGAP5Q13017 1502 aa25.94■■□□□ 1.74
PDZRN3-207ENST00000478209 EFCAB2Q5VUJ9 269 aa25.94■■□□□ 1.74
PDZRN3-207ENST00000478209 PREX2Q70Z35 1606 aa25.92■■□□□ 1.74
PDZRN3-207ENST00000478209 MAP3K1Q13233 1512 aa25.91■■□□□ 1.74
PDZRN3-207ENST00000478209 DENND4BO75064 1496 aaPredicted RBP25.89■■□□□ 1.73
PDZRN3-207ENST00000478209 ADGRL1O94910 1474 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms