RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
TRIM13-208ENST00000478111 CUL7Q14999 1698 aa29.31■■■□□ 2.28
TRIM13-208ENST00000478111 KIF13AQ9H1H9 1805 aa29.29■■■□□ 2.28
TRIM13-208ENST00000478111 KIAA0586Q9BVV6 1533 aa29.27■■■□□ 2.28
TRIM13-208ENST00000478111 ADCY10Q96PN6 1610 aa29.16■■■□□ 2.26
TRIM13-208ENST00000478111 CARMIL1Q5VZK9 1371 aa29.16■■■□□ 2.26
TRIM13-208ENST00000478111 MAPKBP1O60336 1514 aa29.11■■■□□ 2.25
TRIM13-208ENST00000478111 ABCC10Q5T3U5 1492 aa29.1■■■□□ 2.25
TRIM13-208ENST00000478111 NPM1P06748 294 aaKnown RBP eCLIP29.08■■■□□ 2.25
TRIM13-208ENST00000478111 FAM69CQ0P6D2 419 aa29.04■■■□□ 2.24
TRIM13-208ENST00000478111 DIP2BQ9P265 1576 aa29.03■■■□□ 2.24
TRIM13-208ENST00000478111 AEBP2Q6ZN18 517 aaPredicted RBP28.99■■■□□ 2.23
TRIM13-208ENST00000478111 PTPRGP23470 1445 aa28.99■■■□□ 2.23
TRIM13-208ENST00000478111 IQGAP2Q13576 1575 aa28.98■■■□□ 2.23
TRIM13-208ENST00000478111 TNIKQ9UKE5 1360 aa28.94■■■□□ 2.22
TRIM13-208ENST00000478111 CARMIL2Q6F5E8 1435 aa28.94■■■□□ 2.22
TRIM13-208ENST00000478111 RAPGEF2Q9Y4G8 1499 aa28.89■■■□□ 2.22
TRIM13-208ENST00000478111 TTBK1Q5TCY1 1321 aaPredicted RBP28.89■■■□□ 2.21
TRIM13-208ENST00000478111 DISP1Q96F81 1524 aa28.89■■■□□ 2.21
TRIM13-208ENST00000478111 ABCC2Q92887 1545 aa28.85■■■□□ 2.21
TRIM13-208ENST00000478111 TSPOAP1O95153 1857 aa28.85■■■□□ 2.21
TRIM13-208ENST00000478111 UGGT2Q9NYU1 1516 aa28.82■■■□□ 2.2
TRIM13-208ENST00000478111 UHRF1BP1LA0JNW5 1464 aa28.81■■■□□ 2.2
TRIM13-208ENST00000478111 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
TRIM13-208ENST00000478111 ASXL2Q76L83 1435 aa28.76■■■□□ 2.19
TRIM13-208ENST00000478111 KDM6BO15054 1643 aa28.75■■■□□ 2.19
TRIM13-208ENST00000478111 KIAA0556O60303 1618 aa28.73■■■□□ 2.19
TRIM13-208ENST00000478111 PLB1Q6P1J6 1458 aa28.72■■■□□ 2.19
TRIM13-208ENST00000478111 GLI2P10070 1586 aa28.71■■■□□ 2.19
TRIM13-208ENST00000478111 CTTNBP2Q8WZ74 1663 aa28.7■■■□□ 2.18
TRIM13-208ENST00000478111 KDM5BQ9UGL1 1544 aa28.69■■■□□ 2.18
TRIM13-208ENST00000478111 PPRC1Q5VV67 1664 aaKnown RBP28.69■■■□□ 2.18
TRIM13-208ENST00000478111 ZCCHC11Q5TAX3 1644 aaKnown RBP28.64■■■□□ 2.18
TRIM13-208ENST00000478111 PRXQ9BXM0 1461 aa28.62■■■□□ 2.17
TRIM13-208ENST00000478111 EPRSP07814 1512 aaKnown RBP28.6■■■□□ 2.17
TRIM13-208ENST00000478111 MAP3K4Q9Y6R4 1608 aa28.56■■■□□ 2.16
TRIM13-208ENST00000478111 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
TRIM13-208ENST00000478111 KDM4FA0A1W2PPD8 638 aa28.53■■■□□ 2.16
TRIM13-208ENST00000478111 ABCA8O94911 1581 aa28.5■■■□□ 2.15
TRIM13-208ENST00000478111 COL17A1Q9UMD9 1497 aaPredicted RBP28.48■■■□□ 2.15
TRIM13-208ENST00000478111 WDR7Q9Y4E6 1490 aa28.46■■■□□ 2.15
TRIM13-208ENST00000478111 TEX14Q8IWB6 1497 aa28.4■■■□□ 2.14
TRIM13-208ENST00000478111 CSRNP3Q8WYN3 585 aa28.36■■■□□ 2.13
TRIM13-208ENST00000478111 CFAP43Q8NDM7 1665 aa28.33■■■□□ 2.13
TRIM13-208ENST00000478111 KCNH8Q96L42 1107 aa28.31■■■□□ 2.12
TRIM13-208ENST00000478111 P3H3Q8IVL6 736 aa28.3■■■□□ 2.12
TRIM13-208ENST00000478111 SAMD9Q5K651 1589 aa28.29■■■□□ 2.12
TRIM13-208ENST00000478111 MAGI3Q5TCQ9 1506 aa28.29■■■□□ 2.12
TRIM13-208ENST00000478111 CD109Q6YHK3 1445 aa28.29■■■□□ 2.12
TRIM13-208ENST00000478111 ATP10BO94823 1461 aa28.25■■■□□ 2.11
TRIM13-208ENST00000478111 ADGRL1O94910 1474 aa28.25■■■□□ 2.11
TRIM13-208ENST00000478111 EEA1Q15075 1411 aa28.2■■■□□ 2.11
TRIM13-208ENST00000478111 ARID3CA6NKF2 412 aa28.2■■■□□ 2.1
TRIM13-208ENST00000478111 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
TRIM13-208ENST00000478111 RAPGEF6Q8TEU7 1601 aa28.16■■■□□ 2.1
TRIM13-208ENST00000478111 ABCA9Q8IUA7 1624 aa28.12■■■□□ 2.09
TRIM13-208ENST00000478111 ARAP3Q8WWN8 1544 aa28.08■■■□□ 2.09
TRIM13-208ENST00000478111 NUP153P49790 1475 aaKnown RBP28.08■■■□□ 2.09
TRIM13-208ENST00000478111 FHOD3Q2V2M9 1422 aa28.06■■■□□ 2.08
TRIM13-208ENST00000478111 RANGAP1P46060 587 aaPredicted RBP28.05■■■□□ 2.08
TRIM13-208ENST00000478111 KIF21BO75037 1637 aa28.03■■■□□ 2.08
TRIM13-208ENST00000478111 PHLDB1Q86UU1 1377 aa27.99■■■□□ 2.07
TRIM13-208ENST00000478111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.98■■■□□ 2.07
TRIM13-208ENST00000478111 HNRNPUL2Q1KMD3 747 aaKnown RBP27.98■■■□□ 2.07
TRIM13-208ENST00000478111 EFCAB5A4FU69 1503 aa27.95■■■□□ 2.06
TRIM13-208ENST00000478111 NEO1Q92859 1461 aa27.95■■■□□ 2.06
TRIM13-208ENST00000478111 RAPGEF3O95398 923 aa27.9■■■□□ 2.06
TRIM13-208ENST00000478111 HECW2Q9P2P5 1572 aa27.88■■■□□ 2.05
TRIM13-208ENST00000478111 FRMPD1Q5SYB0 1578 aa27.87■■■□□ 2.05
TRIM13-208ENST00000478111 PLEKHD1A6NEE1 506 aa27.87■■■□□ 2.05
TRIM13-208ENST00000478111 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
TRIM13-208ENST00000478111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.82■■■□□ 2.04
TRIM13-208ENST00000478111 ADAMTSL3P82987 1691 aa27.79■■■□□ 2.04
TRIM13-208ENST00000478111 TTC37Q6PGP7 1564 aa27.78■■■□□ 2.04
TRIM13-208ENST00000478111 CDK13Q14004 1512 aaKnown RBP27.78■■■□□ 2.04
TRIM13-208ENST00000478111 RICTORQ6R327 1708 aa27.78■■■□□ 2.04
TRIM13-208ENST00000478111 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
TRIM13-208ENST00000478111 AKNAQ7Z591 1439 aa27.76■■■□□ 2.04
TRIM13-208ENST00000478111 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
TRIM13-208ENST00000478111 FANCAO15360 1455 aa27.74■■■□□ 2.03
TRIM13-208ENST00000478111 ARHGAP35Q9NRY4 1499 aa27.74■■■□□ 2.03
TRIM13-208ENST00000478111 DENND4BO75064 1496 aaPredicted RBP27.73■■■□□ 2.03
TRIM13-208ENST00000478111 CFAP74Q9C0B2 1584 aa27.73■■■□□ 2.03
TRIM13-208ENST00000478111 BCORL1Q5H9F3 1711 aa27.72■■■□□ 2.03
TRIM13-208ENST00000478111 PTPRMP28827 1452 aa27.7■■■□□ 2.02
TRIM13-208ENST00000478111 FMN1Q68DA7 1419 aa27.68■■■□□ 2.02
TRIM13-208ENST00000478111 ARHGEF40Q8TER5 1519 aa27.68■■■□□ 2.02
TRIM13-208ENST00000478111 HECW1Q76N89 1606 aa27.67■■■□□ 2.02
TRIM13-208ENST00000478111 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
TRIM13-208ENST00000478111 MADDQ8WXG6 1647 aa27.64■■■□□ 2.02
TRIM13-208ENST00000478111 ZMYM4Q5VZL5 1548 aa27.64■■■□□ 2.02
TRIM13-208ENST00000478111 PLCH2O75038 1416 aa27.63■■■□□ 2.01
TRIM13-208ENST00000478111 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
TRIM13-208ENST00000478111 ATP1B4Q9UN42 357 aaPredicted RBP27.61■■■□□ 2.01
TRIM13-208ENST00000478111 LRRIQ1Q96JM4 1722 aa27.61■■■□□ 2.01
TRIM13-208ENST00000478111 SIGLEC1Q9BZZ2 1709 aa27.6■■■□□ 2.01
TRIM13-208ENST00000478111 YEATS2Q9ULM3 1422 aa27.58■■■□□ 2
TRIM13-208ENST00000478111 KIF14Q15058 1648 aa27.57■■■□□ 2
TRIM13-208ENST00000478111 MYO5CQ9NQX4 1742 aa27.57■■■□□ 2
TRIM13-208ENST00000478111 SCAPERQ9BY12 1400 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms