RNA–Protein interactions for RNA: ENST00000477909.5

NXPE3-203, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,450 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-203ENST00000477909 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
NXPE3-203ENST00000477909 CUX2O14529 1486 aa11.09□□□□□ -0.63
NXPE3-203ENST00000477909 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
NXPE3-203ENST00000477909 APLP2Q06481 763 aa11.07□□□□□ -0.64
NXPE3-203ENST00000477909 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
NXPE3-203ENST00000477909 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
NXPE3-203ENST00000477909 MRC2Q9UBG0 1479 aa11.05□□□□□ -0.64
NXPE3-203ENST00000477909 ADAMTS12P58397 1594 aa11.04□□□□□ -0.64
NXPE3-203ENST00000477909 AQRO60306 1485 aaKnown RBP eCLIP11.02□□□□□ -0.64
NXPE3-203ENST00000477909 LRRIQ1Q96JM4 1722 aa11.02□□□□□ -0.65
NXPE3-203ENST00000477909 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
NXPE3-203ENST00000477909 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
NXPE3-203ENST00000477909 KANK4Q5T7N3 995 aaPredicted RBP10.99□□□□□ -0.65
NXPE3-203ENST00000477909 CARMIL1Q5VZK9 1371 aa10.98□□□□□ -0.65
NXPE3-203ENST00000477909 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
NXPE3-203ENST00000477909 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.65
NXPE3-203ENST00000477909 DIEXFQ68CQ4 756 aaKnown RBP10.95□□□□□ -0.66
NXPE3-203ENST00000477909 IFT140Q96RY7 1462 aa10.95□□□□□ -0.66
NXPE3-203ENST00000477909 FYCO1Q9BQS8 1478 aa10.94□□□□□ -0.66
NXPE3-203ENST00000477909 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
NXPE3-203ENST00000477909 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
NXPE3-203ENST00000477909 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
NXPE3-203ENST00000477909 UGGT2Q9NYU1 1516 aa10.9□□□□□ -0.67
NXPE3-203ENST00000477909 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
NXPE3-203ENST00000477909 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
NXPE3-203ENST00000477909 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
NXPE3-203ENST00000477909 P3H3Q8IVL6 736 aa10.88□□□□□ -0.67
NXPE3-203ENST00000477909 IQGAP2Q13576 1575 aa10.88□□□□□ -0.67
NXPE3-203ENST00000477909 CASKIN1Q8WXD9 1431 aa10.88□□□□□ -0.67
NXPE3-203ENST00000477909 GRIN2BQ13224 1484 aa10.88□□□□□ -0.67
NXPE3-203ENST00000477909 ITGAEP38570 1179 aa10.88□□□□□ -0.67
NXPE3-203ENST00000477909 ARHGEF11O15085 1522 aa10.86□□□□□ -0.67
NXPE3-203ENST00000477909 LRRC9Q6ZRR7 1453 aa10.85□□□□□ -0.67
NXPE3-203ENST00000477909 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
NXPE3-203ENST00000477909 ATP1B4Q9UN42 357 aaPredicted RBP10.83□□□□□ -0.67
NXPE3-203ENST00000477909 YTHDC1Q96MU7 727 aaKnown RBP10.83□□□□□ -0.68
NXPE3-203ENST00000477909 KIAA0556O60303 1618 aa10.82□□□□□ -0.68
NXPE3-203ENST00000477909 HECW1Q76N89 1606 aa10.82□□□□□ -0.68
NXPE3-203ENST00000477909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.82□□□□□ -0.68
NXPE3-203ENST00000477909 FMN1Q68DA7 1419 aa10.81□□□□□ -0.68
NXPE3-203ENST00000477909 DHX57Q6P158 1386 aaKnown RBP10.8□□□□□ -0.68
NXPE3-203ENST00000477909 CCNB3Q8WWL7 1395 aa10.79□□□□□ -0.68
NXPE3-203ENST00000477909 SUPT6HQ7KZ85 1726 aaKnown RBP10.79□□□□□ -0.68
NXPE3-203ENST00000477909 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
NXPE3-203ENST00000477909 ADCY10Q96PN6 1610 aa10.78□□□□□ -0.68
NXPE3-203ENST00000477909 EHBP1L1Q8N3D4 1523 aa10.78□□□□□ -0.68
NXPE3-203ENST00000477909 ZNF608Q9ULD9 1512 aaPredicted RBP10.78□□□□□ -0.68
NXPE3-203ENST00000477909 CCDC18Q5T9S5 1454 aa10.78□□□□□ -0.68
NXPE3-203ENST00000477909 GRIN2AQ12879 1464 aa10.77□□□□□ -0.68
NXPE3-203ENST00000477909 BCL11AQ9H165 835 aa10.77□□□□□ -0.69
NXPE3-203ENST00000477909 KIAA0586Q9BVV6 1533 aa10.76□□□□□ -0.69
NXPE3-203ENST00000477909 MIER1Q8N108 512 aa10.76□□□□□ -0.69
NXPE3-203ENST00000477909 TDRD9Q8NDG6 1382 aaKnown RBP10.76□□□□□ -0.69
NXPE3-203ENST00000477909 SHROOM2Q13796 1616 aa10.76□□□□□ -0.69
NXPE3-203ENST00000477909 FHOD3Q2V2M9 1422 aa10.75□□□□□ -0.69
NXPE3-203ENST00000477909 DISP1Q96F81 1524 aa10.75□□□□□ -0.69
NXPE3-203ENST00000477909 SYNJ2O15056 1496 aa10.75□□□□□ -0.69
NXPE3-203ENST00000477909 NUP160Q12769 1436 aa10.75□□□□□ -0.69
NXPE3-203ENST00000477909 FAM50AQ14320 339 aaKnown RBP10.74□□□□□ -0.69
NXPE3-203ENST00000477909 PHLDB1Q86UU1 1377 aa10.73□□□□□ -0.69
NXPE3-203ENST00000477909 GCC2Q8IWJ2 1684 aa10.73□□□□□ -0.69
NXPE3-203ENST00000477909 RAPGEF6Q8TEU7 1601 aa10.73□□□□□ -0.69
NXPE3-203ENST00000477909 MAGI3Q5TCQ9 1506 aa10.72□□□□□ -0.69
NXPE3-203ENST00000477909 TCOF1Q13428 1488 aaKnown RBP10.72□□□□□ -0.69
NXPE3-203ENST00000477909 RAB3GAP2Q9H2M9 1393 aa10.7□□□□□ -0.7
NXPE3-203ENST00000477909 CHD1O14646 1710 aa10.7□□□□□ -0.7
NXPE3-203ENST00000477909 CLSPNQ9HAW4 1339 aa10.69□□□□□ -0.7
NXPE3-203ENST00000477909 ERCC6Q03468 1493 aa10.69□□□□□ -0.7
NXPE3-203ENST00000477909 CROCC2H7BZ55 1655 aa10.67□□□□□ -0.7
NXPE3-203ENST00000477909 ABCA8O94911 1581 aa10.67□□□□□ -0.7
NXPE3-203ENST00000477909 EPRSP07814 1512 aaKnown RBP10.66□□□□□ -0.7
NXPE3-203ENST00000477909 PTPN23Q9H3S7 1636 aa10.66□□□□□ -0.7
NXPE3-203ENST00000477909 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
NXPE3-203ENST00000477909 ANP32EQ9BTT0 268 aa10.66□□□□□ -0.7
NXPE3-203ENST00000477909 AKNAQ7Z591 1439 aa10.64□□□□□ -0.71
NXPE3-203ENST00000477909 SIN3AQ96ST3 1273 aa10.64□□□□□ -0.71
NXPE3-203ENST00000477909 SETD5Q9C0A6 1442 aa10.64□□□□□ -0.71
NXPE3-203ENST00000477909 MAPKBP1O60336 1514 aa10.63□□□□□ -0.71
NXPE3-203ENST00000477909 FGD6Q6ZV73 1430 aa10.62□□□□□ -0.71
NXPE3-203ENST00000477909 ADGBQ8N7X0 1667 aa10.62□□□□□ -0.71
NXPE3-203ENST00000477909 NUP153P49790 1475 aaKnown RBP10.62□□□□□ -0.71
NXPE3-203ENST00000477909 NCOA2Q15596 1464 aa10.62□□□□□ -0.71
NXPE3-203ENST00000477909 DNMT1P26358 1616 aaKnown RBP10.61□□□□□ -0.71
NXPE3-203ENST00000477909 MYOM3Q5VTT5 1437 aa10.61□□□□□ -0.71
NXPE3-203ENST00000477909 CLASP1Q7Z460 1538 aa10.6□□□□□ -0.71
NXPE3-203ENST00000477909 MIA2Q96PC5 1412 aa10.6□□□□□ -0.71
NXPE3-203ENST00000477909 MTUS2Q5JR59 1369 aa10.59□□□□□ -0.71
NXPE3-203ENST00000477909 ARID3CA6NKF2 412 aa10.59□□□□□ -0.71
NXPE3-203ENST00000477909 CDC42BPAQ5VT25 1732 aa10.58□□□□□ -0.72
NXPE3-203ENST00000477909 CDK13Q14004 1512 aaKnown RBP10.56□□□□□ -0.72
NXPE3-203ENST00000477909 HFM1A2PYH4 1435 aa10.56□□□□□ -0.72
NXPE3-203ENST00000477909 PTPRKQ15262 1439 aa10.54□□□□□ -0.72
NXPE3-203ENST00000477909 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
NXPE3-203ENST00000477909 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
NXPE3-203ENST00000477909 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
NXPE3-203ENST00000477909 KIF14Q15058 1648 aa10.52□□□□□ -0.73
NXPE3-203ENST00000477909 PREX2Q70Z35 1606 aa10.52□□□□□ -0.73
NXPE3-203ENST00000477909 CHIC2Q9UKJ5 165 aa10.51□□□□□ -0.73
NXPE3-203ENST00000477909 ABCC10Q5T3U5 1492 aa10.5□□□□□ -0.73
NXPE3-203ENST00000477909 ARHGEF5Q12774 1597 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms