RNA–Protein interactions for RNA: ENST00000477859.1

ITGB8-203, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 5,573 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-203ENST00000477859 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
ITGB8-203ENST00000477859 CARMIL1Q5VZK9 1371 aa11.95□□□□□ -0.5
ITGB8-203ENST00000477859 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
ITGB8-203ENST00000477859 ANP32EQ9BTT0 268 aa11.94□□□□□ -0.5
ITGB8-203ENST00000477859 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
ITGB8-203ENST00000477859 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
ITGB8-203ENST00000477859 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
ITGB8-203ENST00000477859 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
ITGB8-203ENST00000477859 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
ITGB8-203ENST00000477859 TONSLQ96HA7 1378 aa11.91□□□□□ -0.5
ITGB8-203ENST00000477859 ANP32CO43423 234 aa11.91□□□□□ -0.5
ITGB8-203ENST00000477859 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
ITGB8-203ENST00000477859 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
ITGB8-203ENST00000477859 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
ITGB8-203ENST00000477859 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
ITGB8-203ENST00000477859 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
ITGB8-203ENST00000477859 RGL3Q3MIN7 710 aa11.8□□□□□ -0.52
ITGB8-203ENST00000477859 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
ITGB8-203ENST00000477859 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
ITGB8-203ENST00000477859 HIRIP3Q9BW71 556 aaPredicted RBP11.79□□□□□ -0.52
ITGB8-203ENST00000477859 MLECQ14165 292 aa11.78□□□□□ -0.52
ITGB8-203ENST00000477859 CCNB3Q8WWL7 1395 aa11.77□□□□□ -0.52
ITGB8-203ENST00000477859 NEFMP07197 916 aa11.76□□□□□ -0.53
ITGB8-203ENST00000477859 FKBP8Q14318 412 aa11.76□□□□□ -0.53
ITGB8-203ENST00000477859 CARMIL2Q6F5E8 1435 aa11.75□□□□□ -0.53
ITGB8-203ENST00000477859 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
ITGB8-203ENST00000477859 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
ITGB8-203ENST00000477859 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
ITGB8-203ENST00000477859 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
ITGB8-203ENST00000477859 CANXP27824 592 aaKnown RBP11.71□□□□□ -0.53
ITGB8-203ENST00000477859 MIER1Q8N108 512 aa11.71□□□□□ -0.54
ITGB8-203ENST00000477859 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
ITGB8-203ENST00000477859 RAD54L2Q9Y4B4 1467 aa11.69□□□□□ -0.54
ITGB8-203ENST00000477859 RUSC2Q8N2Y8 1516 aa11.69□□□□□ -0.54
ITGB8-203ENST00000477859 KANK4Q5T7N3 995 aaPredicted RBP11.69□□□□□ -0.54
ITGB8-203ENST00000477859 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
ITGB8-203ENST00000477859 FHOD3Q2V2M9 1422 aa11.68□□□□□ -0.54
ITGB8-203ENST00000477859 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
ITGB8-203ENST00000477859 NESP48681 1621 aa11.67□□□□□ -0.54
ITGB8-203ENST00000477859 JPH4Q96JJ6 628 aa11.67□□□□□ -0.54
ITGB8-203ENST00000477859 ANP32AP39687 249 aaKnown RBP11.67□□□□□ -0.54
ITGB8-203ENST00000477859 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
ITGB8-203ENST00000477859 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
ITGB8-203ENST00000477859 GLIPR1L2Q4G1C9 344 aa11.66□□□□□ -0.54
ITGB8-203ENST00000477859 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
ITGB8-203ENST00000477859 FAM9BQ8IZU0 186 aa11.65□□□□□ -0.54
ITGB8-203ENST00000477859 GGT6Q6P531 493 aa11.65□□□□□ -0.54
ITGB8-203ENST00000477859 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
ITGB8-203ENST00000477859 NBR1Q14596 966 aa11.64□□□□□ -0.55
ITGB8-203ENST00000477859 SIN3AQ96ST3 1273 aa11.63□□□□□ -0.55
ITGB8-203ENST00000477859 A0A0G2JS52 829 aa11.63□□□□□ -0.55
ITGB8-203ENST00000477859 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
ITGB8-203ENST00000477859 VPS8Q8N3P4 1428 aa11.62□□□□□ -0.55
ITGB8-203ENST00000477859 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
ITGB8-203ENST00000477859 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
ITGB8-203ENST00000477859 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
ITGB8-203ENST00000477859 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
ITGB8-203ENST00000477859 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
ITGB8-203ENST00000477859 GAPVD1Q14C86 1478 aa11.6□□□□□ -0.55
ITGB8-203ENST00000477859 EIF4G2P78344 907 aaKnown RBP eCLIP11.59□□□□□ -0.55
ITGB8-203ENST00000477859 HNRNPMP52272 730 aaKnown RBP eCLIP11.59□□□□□ -0.55
ITGB8-203ENST00000477859 FOXD1Q16676 465 aa11.58□□□□□ -0.56
ITGB8-203ENST00000477859 SUPT16HQ9Y5B9 1047 aaKnown RBP11.58□□□□□ -0.56
ITGB8-203ENST00000477859 KANK1Q14678 1352 aa11.57□□□□□ -0.56
ITGB8-203ENST00000477859 CARD11Q9BXL7 1154 aa11.57□□□□□ -0.56
ITGB8-203ENST00000477859 EFCAB2Q5VUJ9 269 aa11.57□□□□□ -0.56
ITGB8-203ENST00000477859 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
ITGB8-203ENST00000477859 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
ITGB8-203ENST00000477859 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
ITGB8-203ENST00000477859 POGKQ9P215 609 aa11.55□□□□□ -0.56
ITGB8-203ENST00000477859 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
ITGB8-203ENST00000477859 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
ITGB8-203ENST00000477859 PTPRGP23470 1445 aa11.54□□□□□ -0.56
ITGB8-203ENST00000477859 DCAF11Q8TEB1 546 aa11.53□□□□□ -0.56
ITGB8-203ENST00000477859 BICRAQ9NZM4 1560 aa11.53□□□□□ -0.56
ITGB8-203ENST00000477859 MRS2Q9HD23 443 aa11.52□□□□□ -0.56
ITGB8-203ENST00000477859 SAFB2Q14151 953 aaKnown RBP eCLIP11.52□□□□□ -0.56
ITGB8-203ENST00000477859 PPM1GO15355 546 aaPredicted RBP11.52□□□□□ -0.57
ITGB8-203ENST00000477859 IGF1RP08069 1367 aa11.52□□□□□ -0.57
ITGB8-203ENST00000477859 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
ITGB8-203ENST00000477859 PKD2Q13563 968 aa11.51□□□□□ -0.57
ITGB8-203ENST00000477859 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
ITGB8-203ENST00000477859 KIF3BO15066 747 aa11.5□□□□□ -0.57
ITGB8-203ENST00000477859 CFTRP13569 1480 aa11.49□□□□□ -0.57
ITGB8-203ENST00000477859 STK26Q9P289 416 aa11.48□□□□□ -0.57
ITGB8-203ENST00000477859 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
ITGB8-203ENST00000477859 SETD5Q9C0A6 1442 aa11.48□□□□□ -0.57
ITGB8-203ENST00000477859 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
ITGB8-203ENST00000477859 SPAG9O60271 1321 aaKnown RBP11.47□□□□□ -0.57
ITGB8-203ENST00000477859 CCDC18Q5T9S5 1454 aa11.47□□□□□ -0.57
ITGB8-203ENST00000477859 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
ITGB8-203ENST00000477859 NUP155O75694 1391 aa11.46□□□□□ -0.57
ITGB8-203ENST00000477859 HMGXB3Q12766 1538 aa11.46□□□□□ -0.57
ITGB8-203ENST00000477859 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.58
ITGB8-203ENST00000477859 ANKRD30AQ9BXX3 1397 aa11.45□□□□□ -0.58
ITGB8-203ENST00000477859 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
ITGB8-203ENST00000477859 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
ITGB8-203ENST00000477859 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
ITGB8-203ENST00000477859 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
ITGB8-203ENST00000477859 SOX12O15370 315 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms