RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
COL11A2-206ENST00000477772 CTTNBP2Q8WZ74 1663 aa25.97■■□□□ 1.75
COL11A2-206ENST00000477772 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.74
COL11A2-206ENST00000477772 UBTFP17480 764 aaKnown RBP25.94■■□□□ 1.74
COL11A2-206ENST00000477772 IQGAP2Q13576 1575 aa25.92■■□□□ 1.74
COL11A2-206ENST00000477772 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
COL11A2-206ENST00000477772 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
COL11A2-206ENST00000477772 TNIKQ9UKE5 1360 aa25.81■■□□□ 1.72
COL11A2-206ENST00000477772 UGGT2Q9NYU1 1516 aa25.79■■□□□ 1.72
COL11A2-206ENST00000477772 ERCC6L2Q5T890 1561 aa25.77■■□□□ 1.72
COL11A2-206ENST00000477772 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
COL11A2-206ENST00000477772 RANGAP1P46060 587 aaPredicted RBP25.75■■□□□ 1.71
COL11A2-206ENST00000477772 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
COL11A2-206ENST00000477772 HRCP23327 699 aa25.73■■□□□ 1.71
COL11A2-206ENST00000477772 DISP1Q96F81 1524 aa25.73■■□□□ 1.71
COL11A2-206ENST00000477772 ARHGEF11O15085 1522 aa25.72■■□□□ 1.71
COL11A2-206ENST00000477772 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
COL11A2-206ENST00000477772 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
COL11A2-206ENST00000477772 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
COL11A2-206ENST00000477772 SAMD9Q5K651 1589 aa25.68■■□□□ 1.7
COL11A2-206ENST00000477772 PCGF6Q9BYE7 350 aa25.67■■□□□ 1.7
COL11A2-206ENST00000477772 KIAA0556O60303 1618 aa25.67■■□□□ 1.7
COL11A2-206ENST00000477772 CARMIL2Q6F5E8 1435 aa25.65■■□□□ 1.7
COL11A2-206ENST00000477772 P3H3Q8IVL6 736 aa25.62■■□□□ 1.69
COL11A2-206ENST00000477772 ARHGAP35Q9NRY4 1499 aa25.62■■□□□ 1.69
COL11A2-206ENST00000477772 CEP162Q5TB80 1403 aa25.61■■□□□ 1.69
COL11A2-206ENST00000477772 EFCAB5A4FU69 1503 aa25.61■■□□□ 1.69
COL11A2-206ENST00000477772 CLIP1P30622 1438 aa25.59■■□□□ 1.69
COL11A2-206ENST00000477772 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
COL11A2-206ENST00000477772 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
COL11A2-206ENST00000477772 FHOD3Q2V2M9 1422 aa25.55■■□□□ 1.68
COL11A2-206ENST00000477772 TTBK1Q5TCY1 1321 aaPredicted RBP25.53■■□□□ 1.68
COL11A2-206ENST00000477772 PTPRGP23470 1445 aa25.51■■□□□ 1.67
COL11A2-206ENST00000477772 TRIM26Q12899 539 aaPredicted RBP25.47■■□□□ 1.67
COL11A2-206ENST00000477772 CYB5RLQ6IPT4 315 aa25.47■■□□□ 1.67
COL11A2-206ENST00000477772 PLB1Q6P1J6 1458 aa25.4■■□□□ 1.66
COL11A2-206ENST00000477772 FMN1Q68DA7 1419 aa25.36■■□□□ 1.65
COL11A2-206ENST00000477772 ABCA8O94911 1581 aa25.36■■□□□ 1.65
COL11A2-206ENST00000477772 UACAQ9BZF9 1416 aa25.35■■□□□ 1.65
COL11A2-206ENST00000477772 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
COL11A2-206ENST00000477772 RAPGEF6Q8TEU7 1601 aa25.32■■□□□ 1.64
COL11A2-206ENST00000477772 ABCC2Q92887 1545 aa25.31■■□□□ 1.64
COL11A2-206ENST00000477772 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
COL11A2-206ENST00000477772 PCF11O94913 1555 aaKnown RBP25.27■■□□□ 1.64
COL11A2-206ENST00000477772 VPS8Q8N3P4 1428 aa25.26■■□□□ 1.63
COL11A2-206ENST00000477772 NUP153P49790 1475 aaKnown RBP25.25■■□□□ 1.63
COL11A2-206ENST00000477772 CASKIN1Q8WXD9 1431 aa25.25■■□□□ 1.63
COL11A2-206ENST00000477772 LRRIQ1Q96JM4 1722 aa25.2■■□□□ 1.63
COL11A2-206ENST00000477772 ARID3CA6NKF2 412 aa25.2■■□□□ 1.63
COL11A2-206ENST00000477772 ATP1B4Q9UN42 357 aaPredicted RBP25.2■■□□□ 1.63
COL11A2-206ENST00000477772 FYCO1Q9BQS8 1478 aa25.2■■□□□ 1.62
COL11A2-206ENST00000477772 KDM5BQ9UGL1 1544 aa25.2■■□□□ 1.62
COL11A2-206ENST00000477772 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
COL11A2-206ENST00000477772 ATP10BO94823 1461 aa25.17■■□□□ 1.62
COL11A2-206ENST00000477772 ZCCHC11Q5TAX3 1644 aaKnown RBP25.16■■□□□ 1.62
COL11A2-206ENST00000477772 EPRSP07814 1512 aaKnown RBP25.15■■□□□ 1.62
COL11A2-206ENST00000477772 CDK13Q14004 1512 aaKnown RBP25.14■■□□□ 1.61
COL11A2-206ENST00000477772 NPM1P06748 294 aaKnown RBP eCLIP25.11■■□□□ 1.61
COL11A2-206ENST00000477772 CCDC18Q5T9S5 1454 aa25.06■■□□□ 1.6
COL11A2-206ENST00000477772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.06■■□□□ 1.6
COL11A2-206ENST00000477772 HNRNPUL2Q1KMD3 747 aaKnown RBP25.06■■□□□ 1.6
COL11A2-206ENST00000477772 MAPKBP1O60336 1514 aa25.04■■□□□ 1.6
COL11A2-206ENST00000477772 ASXL2Q76L83 1435 aa25.02■■□□□ 1.6
COL11A2-206ENST00000477772 CFAP43Q8NDM7 1665 aa24.99■■□□□ 1.59
COL11A2-206ENST00000477772 TIAM1Q13009 1591 aa24.99■■□□□ 1.59
COL11A2-206ENST00000477772 ZEB1P37275 1124 aaPredicted RBP24.98■■□□□ 1.59
COL11A2-206ENST00000477772 MAGI3Q5TCQ9 1506 aa24.98■■□□□ 1.59
COL11A2-206ENST00000477772 WDR7Q9Y4E6 1490 aa24.96■■□□□ 1.59
COL11A2-206ENST00000477772 MAP3K1Q13233 1512 aa24.95■■□□□ 1.58
COL11A2-206ENST00000477772 PLEKHD1A6NEE1 506 aa24.95■■□□□ 1.58
COL11A2-206ENST00000477772 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
COL11A2-206ENST00000477772 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
COL11A2-206ENST00000477772 APLP2Q06481 763 aa24.91■■□□□ 1.58
COL11A2-206ENST00000477772 KANK4Q5T7N3 995 aaPredicted RBP24.91■■□□□ 1.58
COL11A2-206ENST00000477772 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
COL11A2-206ENST00000477772 KCNH8Q96L42 1107 aa24.89■■□□□ 1.58
COL11A2-206ENST00000477772 LRRC9Q6ZRR7 1453 aa24.88■■□□□ 1.57
COL11A2-206ENST00000477772 ABCC10Q5T3U5 1492 aa24.87■■□□□ 1.57
COL11A2-206ENST00000477772 MTUS2Q5JR59 1369 aa24.86■■□□□ 1.57
COL11A2-206ENST00000477772 DIP2BQ9P265 1576 aa24.86■■□□□ 1.57
COL11A2-206ENST00000477772 KIF14Q15058 1648 aa24.86■■□□□ 1.57
COL11A2-206ENST00000477772 KIF13AQ9H1H9 1805 aa24.84■■□□□ 1.57
COL11A2-206ENST00000477772 EHBP1L1Q8N3D4 1523 aa24.83■■□□□ 1.57
COL11A2-206ENST00000477772 FAM69CQ0P6D2 419 aa24.8■■□□□ 1.56
COL11A2-206ENST00000477772 GLI2P10070 1586 aa24.79■■□□□ 1.56
COL11A2-206ENST00000477772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.79■■□□□ 1.56
COL11A2-206ENST00000477772 ABCA9Q8IUA7 1624 aa24.77■■□□□ 1.56
COL11A2-206ENST00000477772 TTC37Q6PGP7 1564 aa24.77■■□□□ 1.56
COL11A2-206ENST00000477772 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
COL11A2-206ENST00000477772 SUPT6HQ7KZ85 1726 aaKnown RBP24.74■■□□□ 1.55
COL11A2-206ENST00000477772 MAP3K4Q9Y6R4 1608 aa24.73■■□□□ 1.55
COL11A2-206ENST00000477772 NCOA2Q15596 1464 aa24.73■■□□□ 1.55
COL11A2-206ENST00000477772 CD109Q6YHK3 1445 aa24.68■■□□□ 1.54
COL11A2-206ENST00000477772 TSPOAP1O95153 1857 aa24.67■■□□□ 1.54
COL11A2-206ENST00000477772 CDC42BPAQ5VT25 1732 aa24.66■■□□□ 1.54
COL11A2-206ENST00000477772 MYO5CQ9NQX4 1742 aa24.65■■□□□ 1.54
COL11A2-206ENST00000477772 GPATCH8Q9UKJ3 1502 aaKnown RBP24.64■■□□□ 1.54
COL11A2-206ENST00000477772 PPRC1Q5VV67 1664 aaKnown RBP24.64■■□□□ 1.54
COL11A2-206ENST00000477772 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
COL11A2-206ENST00000477772 CDC42BPBQ9Y5S2 1711 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms