RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
HMGCS2-203ENST00000476640 IGF1RP08069 1367 aa23.26■■□□□ 1.31
HMGCS2-203ENST00000476640 KIAA0586Q9BVV6 1533 aa23.23■■□□□ 1.31
HMGCS2-203ENST00000476640 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
HMGCS2-203ENST00000476640 NPM1P06748 294 aaKnown RBP eCLIP23.14■■□□□ 1.29
HMGCS2-203ENST00000476640 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.29
HMGCS2-203ENST00000476640 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
HMGCS2-203ENST00000476640 MAPKBP1O60336 1514 aa23.08■■□□□ 1.29
HMGCS2-203ENST00000476640 IQGAP2Q13576 1575 aa23.06■■□□□ 1.28
HMGCS2-203ENST00000476640 CARMIL2Q6F5E8 1435 aa23.05■■□□□ 1.28
HMGCS2-203ENST00000476640 ABCC10Q5T3U5 1492 aa23.02■■□□□ 1.28
HMGCS2-203ENST00000476640 PTPRGP23470 1445 aa22.99■■□□□ 1.27
HMGCS2-203ENST00000476640 DIP2BQ9P265 1576 aa22.99■■□□□ 1.27
HMGCS2-203ENST00000476640 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
HMGCS2-203ENST00000476640 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
HMGCS2-203ENST00000476640 TNIKQ9UKE5 1360 aa22.97■■□□□ 1.27
HMGCS2-203ENST00000476640 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
HMGCS2-203ENST00000476640 TSPOAP1O95153 1857 aa22.9■■□□□ 1.26
HMGCS2-203ENST00000476640 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
HMGCS2-203ENST00000476640 ABCC2Q92887 1545 aa22.89■■□□□ 1.26
HMGCS2-203ENST00000476640 CTTNBP2Q8WZ74 1663 aa22.89■■□□□ 1.25
HMGCS2-203ENST00000476640 UGGT2Q9NYU1 1516 aa22.87■■□□□ 1.25
HMGCS2-203ENST00000476640 DISP1Q96F81 1524 aa22.87■■□□□ 1.25
HMGCS2-203ENST00000476640 UHRF1BP1LA0JNW5 1464 aa22.85■■□□□ 1.25
HMGCS2-203ENST00000476640 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
HMGCS2-203ENST00000476640 KDM6BO15054 1643 aa22.82■■□□□ 1.24
HMGCS2-203ENST00000476640 KIAA0556O60303 1618 aa22.82■■□□□ 1.24
HMGCS2-203ENST00000476640 PLB1Q6P1J6 1458 aa22.81■■□□□ 1.24
HMGCS2-203ENST00000476640 ASXL2Q76L83 1435 aa22.78■■□□□ 1.24
HMGCS2-203ENST00000476640 GLI2P10070 1586 aa22.76■■□□□ 1.23
HMGCS2-203ENST00000476640 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
HMGCS2-203ENST00000476640 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
HMGCS2-203ENST00000476640 ZCCHC11Q5TAX3 1644 aaKnown RBP22.73■■□□□ 1.23
HMGCS2-203ENST00000476640 PRXQ9BXM0 1461 aa22.7■■□□□ 1.22
HMGCS2-203ENST00000476640 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
HMGCS2-203ENST00000476640 MAP3K4Q9Y6R4 1608 aa22.65■■□□□ 1.22
HMGCS2-203ENST00000476640 EPRSP07814 1512 aaKnown RBP22.64■■□□□ 1.21
HMGCS2-203ENST00000476640 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
HMGCS2-203ENST00000476640 TEX14Q8IWB6 1497 aa22.6■■□□□ 1.21
HMGCS2-203ENST00000476640 WDR7Q9Y4E6 1490 aa22.59■■□□□ 1.21
HMGCS2-203ENST00000476640 ABCA8O94911 1581 aa22.59■■□□□ 1.21
HMGCS2-203ENST00000476640 CFAP43Q8NDM7 1665 aa22.54■■□□□ 1.2
HMGCS2-203ENST00000476640 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
HMGCS2-203ENST00000476640 EEA1Q15075 1411 aa22.53■■□□□ 1.2
HMGCS2-203ENST00000476640 SAMD9Q5K651 1589 aa22.47■■□□□ 1.19
HMGCS2-203ENST00000476640 CD109Q6YHK3 1445 aa22.44■■□□□ 1.18
HMGCS2-203ENST00000476640 MAGI3Q5TCQ9 1506 aa22.43■■□□□ 1.18
HMGCS2-203ENST00000476640 KDM4FA0A1W2PPD8 638 aa22.43■■□□□ 1.18
HMGCS2-203ENST00000476640 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
HMGCS2-203ENST00000476640 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
HMGCS2-203ENST00000476640 P3H3Q8IVL6 736 aa22.41■■□□□ 1.18
HMGCS2-203ENST00000476640 RAPGEF6Q8TEU7 1601 aa22.41■■□□□ 1.18
HMGCS2-203ENST00000476640 ATP10BO94823 1461 aa22.37■■□□□ 1.17
HMGCS2-203ENST00000476640 KIF21BO75037 1637 aa22.35■■□□□ 1.17
HMGCS2-203ENST00000476640 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
HMGCS2-203ENST00000476640 ABCA9Q8IUA7 1624 aa22.33■■□□□ 1.17
HMGCS2-203ENST00000476640 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
HMGCS2-203ENST00000476640 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
HMGCS2-203ENST00000476640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
HMGCS2-203ENST00000476640 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
HMGCS2-203ENST00000476640 ARAP3Q8WWN8 1544 aa22.26■■□□□ 1.15
HMGCS2-203ENST00000476640 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
HMGCS2-203ENST00000476640 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
HMGCS2-203ENST00000476640 FHOD3Q2V2M9 1422 aa22.25■■□□□ 1.15
HMGCS2-203ENST00000476640 NUP153P49790 1475 aaKnown RBP22.25■■□□□ 1.15
HMGCS2-203ENST00000476640 NEO1Q92859 1461 aa22.2■■□□□ 1.14
HMGCS2-203ENST00000476640 PLEKHD1A6NEE1 506 aa22.16■■□□□ 1.14
HMGCS2-203ENST00000476640 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.13
HMGCS2-203ENST00000476640 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
HMGCS2-203ENST00000476640 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
HMGCS2-203ENST00000476640 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
HMGCS2-203ENST00000476640 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
HMGCS2-203ENST00000476640 RAPGEF3O95398 923 aa22.06■■□□□ 1.12
HMGCS2-203ENST00000476640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.06■■□□□ 1.12
HMGCS2-203ENST00000476640 FRMPD1Q5SYB0 1578 aa22.05■■□□□ 1.12
HMGCS2-203ENST00000476640 HECW2Q9P2P5 1572 aa22.04■■□□□ 1.12
HMGCS2-203ENST00000476640 RICTORQ6R327 1708 aa22.04■■□□□ 1.12
HMGCS2-203ENST00000476640 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
HMGCS2-203ENST00000476640 FANCAO15360 1455 aa22.03■■□□□ 1.12
HMGCS2-203ENST00000476640 CDK13Q14004 1512 aaKnown RBP22.03■■□□□ 1.12
HMGCS2-203ENST00000476640 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
HMGCS2-203ENST00000476640 DENND4BO75064 1496 aaPredicted RBP22.02■■□□□ 1.12
HMGCS2-203ENST00000476640 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
HMGCS2-203ENST00000476640 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
HMGCS2-203ENST00000476640 ADAMTSL3P82987 1691 aa22■■□□□ 1.11
HMGCS2-203ENST00000476640 ARHGEF40Q8TER5 1519 aa21.99■■□□□ 1.11
HMGCS2-203ENST00000476640 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
HMGCS2-203ENST00000476640 ATP1B4Q9UN42 357 aaPredicted RBP21.98■■□□□ 1.11
HMGCS2-203ENST00000476640 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
HMGCS2-203ENST00000476640 BCORL1Q5H9F3 1711 aa21.97■■□□□ 1.11
HMGCS2-203ENST00000476640 ARID4BQ4LE39 1312 aaPredicted RBP21.94■■□□□ 1.1
HMGCS2-203ENST00000476640 ZMYM4Q5VZL5 1548 aa21.94■■□□□ 1.1
HMGCS2-203ENST00000476640 KIF14Q15058 1648 aa21.93■■□□□ 1.1
HMGCS2-203ENST00000476640 PLCH2O75038 1416 aa21.92■■□□□ 1.1
HMGCS2-203ENST00000476640 PTPRMP28827 1452 aa21.9■■□□□ 1.1
HMGCS2-203ENST00000476640 MAGI2Q86UL8 1455 aa21.9■■□□□ 1.1
HMGCS2-203ENST00000476640 ZFYVE16Q7Z3T8 1539 aa21.9■■□□□ 1.1
HMGCS2-203ENST00000476640 CLIP1P30622 1438 aa21.89■■□□□ 1.1
HMGCS2-203ENST00000476640 LRRIQ1Q96JM4 1722 aa21.89■■□□□ 1.1
HMGCS2-203ENST00000476640 MADDQ8WXG6 1647 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms