RNA–Protein interactions for RNA: ENST00000476609.1

MAP4K4-213, Transcript of mitogen-activated protein kinase kinase kinase kinase 4, humanhuman

TSL 2

Gene MAP4K4, Length 3,598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP4K4-213ENST00000476609 CCER2I3L3R5 266 aa13.37□□□□□ -0.27
MAP4K4-213ENST00000476609 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
MAP4K4-213ENST00000476609 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
MAP4K4-213ENST00000476609 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
MAP4K4-213ENST00000476609 NOP58Q9Y2X3 529 aaKnown RBP13.35□□□□□ -0.27
MAP4K4-213ENST00000476609 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
MAP4K4-213ENST00000476609 CCDC136Q96JN2 1154 aa13.32□□□□□ -0.28
MAP4K4-213ENST00000476609 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
MAP4K4-213ENST00000476609 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
MAP4K4-213ENST00000476609 PPP4R2Q9NY27 417 aa13.31□□□□□ -0.28
MAP4K4-213ENST00000476609 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
MAP4K4-213ENST00000476609 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
MAP4K4-213ENST00000476609 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
MAP4K4-213ENST00000476609 KIF21BO75037 1637 aa13.29□□□□□ -0.28
MAP4K4-213ENST00000476609 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
MAP4K4-213ENST00000476609 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
MAP4K4-213ENST00000476609 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.29
MAP4K4-213ENST00000476609 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
MAP4K4-213ENST00000476609 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
MAP4K4-213ENST00000476609 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
MAP4K4-213ENST00000476609 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
MAP4K4-213ENST00000476609 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
MAP4K4-213ENST00000476609 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
MAP4K4-213ENST00000476609 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.3
MAP4K4-213ENST00000476609 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
MAP4K4-213ENST00000476609 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
MAP4K4-213ENST00000476609 CFTRP13569 1480 aa13.19□□□□□ -0.3
MAP4K4-213ENST00000476609 TONSLQ96HA7 1378 aa13.18□□□□□ -0.3
MAP4K4-213ENST00000476609 SETD5Q9C0A6 1442 aa13.17□□□□□ -0.3
MAP4K4-213ENST00000476609 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
MAP4K4-213ENST00000476609 EIF5BO60841 1220 aaKnown RBP13.17□□□□□ -0.3
MAP4K4-213ENST00000476609 MAPKBP1O60336 1514 aa13.15□□□□□ -0.3
MAP4K4-213ENST00000476609 IPO9Q96P70 1041 aaKnown RBP13.14□□□□□ -0.31
MAP4K4-213ENST00000476609 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
MAP4K4-213ENST00000476609 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
MAP4K4-213ENST00000476609 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
MAP4K4-213ENST00000476609 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
MAP4K4-213ENST00000476609 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
MAP4K4-213ENST00000476609 CUX2O14529 1486 aa13.11□□□□□ -0.31
MAP4K4-213ENST00000476609 LAS1LQ9Y4W2 734 aaKnown RBP13.11□□□□□ -0.31
MAP4K4-213ENST00000476609 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
MAP4K4-213ENST00000476609 NEFMP07197 916 aa13.09□□□□□ -0.31
MAP4K4-213ENST00000476609 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
MAP4K4-213ENST00000476609 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
MAP4K4-213ENST00000476609 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
MAP4K4-213ENST00000476609 WDR62O43379 1518 aa13.03□□□□□ -0.32
MAP4K4-213ENST00000476609 SENP3-EIF4A1A0A087X0R7 540 aa13.03□□□□□ -0.32
MAP4K4-213ENST00000476609 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
MAP4K4-213ENST00000476609 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
MAP4K4-213ENST00000476609 DNMBPQ6XZF7 1577 aa13□□□□□ -0.33
MAP4K4-213ENST00000476609 PDS5BQ9NTI5 1447 aa13□□□□□ -0.33
MAP4K4-213ENST00000476609 P3H3Q8IVL6 736 aa13□□□□□ -0.33
MAP4K4-213ENST00000476609 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
MAP4K4-213ENST00000476609 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
MAP4K4-213ENST00000476609 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
MAP4K4-213ENST00000476609 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
MAP4K4-213ENST00000476609 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
MAP4K4-213ENST00000476609 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
MAP4K4-213ENST00000476609 WASHC2AQ641Q2 1341 aa12.96□□□□□ -0.33
MAP4K4-213ENST00000476609 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.33
MAP4K4-213ENST00000476609 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
MAP4K4-213ENST00000476609 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
MAP4K4-213ENST00000476609 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
MAP4K4-213ENST00000476609 PRKRIP1Q9H875 184 aaPredicted RBP12.94□□□□□ -0.34
MAP4K4-213ENST00000476609 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
MAP4K4-213ENST00000476609 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
MAP4K4-213ENST00000476609 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
MAP4K4-213ENST00000476609 AKNAQ7Z591 1439 aa12.93□□□□□ -0.34
MAP4K4-213ENST00000476609 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
MAP4K4-213ENST00000476609 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
MAP4K4-213ENST00000476609 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
MAP4K4-213ENST00000476609 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
MAP4K4-213ENST00000476609 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.35
MAP4K4-213ENST00000476609 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
MAP4K4-213ENST00000476609 CNTLNQ9NXG0 1405 aa12.87□□□□□ -0.35
MAP4K4-213ENST00000476609 GSE1Q14687 1217 aa12.87□□□□□ -0.35
MAP4K4-213ENST00000476609 LRRC9Q6ZRR7 1453 aa12.87□□□□□ -0.35
MAP4K4-213ENST00000476609 PDE4AP27815 886 aa12.86□□□□□ -0.35
MAP4K4-213ENST00000476609 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
MAP4K4-213ENST00000476609 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
MAP4K4-213ENST00000476609 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
MAP4K4-213ENST00000476609 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
MAP4K4-213ENST00000476609 DDRGK1Q96HY6 314 aa12.82□□□□□ -0.36
MAP4K4-213ENST00000476609 WASHC2CQ9Y4E1 1318 aa12.81□□□□□ -0.36
MAP4K4-213ENST00000476609 TARBP1Q13395 1621 aaKnown RBP12.81□□□□□ -0.36
MAP4K4-213ENST00000476609 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
MAP4K4-213ENST00000476609 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
MAP4K4-213ENST00000476609 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
MAP4K4-213ENST00000476609 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
MAP4K4-213ENST00000476609 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
MAP4K4-213ENST00000476609 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
MAP4K4-213ENST00000476609 CCDC7Q96M83 1385 aa12.8□□□□□ -0.36
MAP4K4-213ENST00000476609 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
MAP4K4-213ENST00000476609 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
MAP4K4-213ENST00000476609 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
MAP4K4-213ENST00000476609 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
MAP4K4-213ENST00000476609 NFKBIBQ15653 356 aa12.79□□□□□ -0.36
MAP4K4-213ENST00000476609 ABCA5Q8WWZ7 1642 aa12.79□□□□□ -0.36
MAP4K4-213ENST00000476609 CUX1P39880 1505 aa12.79□□□□□ -0.36
MAP4K4-213ENST00000476609 GLIPR1L2Q4G1C9 344 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms