RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 FBLN2P98095 1184 aa18.9■□□□□ 0.62
XPC-205ENST00000476581 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
XPC-205ENST00000476581 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
XPC-205ENST00000476581 ARHGAP35Q9NRY4 1499 aa18.87■□□□□ 0.61
XPC-205ENST00000476581 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
XPC-205ENST00000476581 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
XPC-205ENST00000476581 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
XPC-205ENST00000476581 MYT1Q01538 1121 aa18.84■□□□□ 0.61
XPC-205ENST00000476581 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.61
XPC-205ENST00000476581 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
XPC-205ENST00000476581 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
XPC-205ENST00000476581 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
XPC-205ENST00000476581 CHD1O14646 1710 aa18.78■□□□□ 0.6
XPC-205ENST00000476581 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
XPC-205ENST00000476581 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
XPC-205ENST00000476581 IQGAP2Q13576 1575 aa18.73■□□□□ 0.59
XPC-205ENST00000476581 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
XPC-205ENST00000476581 NUP160Q12769 1436 aa18.69■□□□□ 0.58
XPC-205ENST00000476581 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
XPC-205ENST00000476581 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
XPC-205ENST00000476581 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
XPC-205ENST00000476581 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
XPC-205ENST00000476581 UGGT2Q9NYU1 1516 aa18.61■□□□□ 0.57
XPC-205ENST00000476581 PCF11O94913 1555 aaKnown RBP18.61■□□□□ 0.57
XPC-205ENST00000476581 JPH4Q96JJ6 628 aa18.59■□□□□ 0.57
XPC-205ENST00000476581 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
XPC-205ENST00000476581 ATP1B4Q9UN42 357 aaPredicted RBP18.57■□□□□ 0.56
XPC-205ENST00000476581 KIAA0556O60303 1618 aa18.57■□□□□ 0.56
XPC-205ENST00000476581 LRRIQ1Q96JM4 1722 aa18.55■□□□□ 0.56
XPC-205ENST00000476581 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
XPC-205ENST00000476581 ARID3CA6NKF2 412 aa18.52■□□□□ 0.55
XPC-205ENST00000476581 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
XPC-205ENST00000476581 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
XPC-205ENST00000476581 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
XPC-205ENST00000476581 CASKIN1Q8WXD9 1431 aa18.47■□□□□ 0.55
XPC-205ENST00000476581 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
XPC-205ENST00000476581 TRIM26Q12899 539 aaPredicted RBP18.47■□□□□ 0.55
XPC-205ENST00000476581 APLP2Q06481 763 aa18.46■□□□□ 0.55
XPC-205ENST00000476581 SHROOM2Q13796 1616 aa18.46■□□□□ 0.55
XPC-205ENST00000476581 FYCO1Q9BQS8 1478 aa18.45■□□□□ 0.54
XPC-205ENST00000476581 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
XPC-205ENST00000476581 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
XPC-205ENST00000476581 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
XPC-205ENST00000476581 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
XPC-205ENST00000476581 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
XPC-205ENST00000476581 MAGI3Q5TCQ9 1506 aa18.37■□□□□ 0.53
XPC-205ENST00000476581 LRRC9Q6ZRR7 1453 aa18.37■□□□□ 0.53
XPC-205ENST00000476581 NUP153P49790 1475 aaKnown RBP18.36■□□□□ 0.53
XPC-205ENST00000476581 RAPGEF6Q8TEU7 1601 aa18.36■□□□□ 0.53
XPC-205ENST00000476581 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
XPC-205ENST00000476581 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
XPC-205ENST00000476581 HECW1Q76N89 1606 aa18.33■□□□□ 0.53
XPC-205ENST00000476581 MAP3K1Q13233 1512 aa18.33■□□□□ 0.52
XPC-205ENST00000476581 PTPRGP23470 1445 aa18.32■□□□□ 0.52
XPC-205ENST00000476581 ABCA8O94911 1581 aa18.3■□□□□ 0.52
XPC-205ENST00000476581 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
XPC-205ENST00000476581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
XPC-205ENST00000476581 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
XPC-205ENST00000476581 MTUS2Q5JR59 1369 aa18.25■□□□□ 0.51
XPC-205ENST00000476581 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
XPC-205ENST00000476581 ATP10BO94823 1461 aa18.22■□□□□ 0.51
XPC-205ENST00000476581 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
XPC-205ENST00000476581 UACAQ9BZF9 1416 aa18.2■□□□□ 0.5
XPC-205ENST00000476581 NCOA2Q15596 1464 aa18.18■□□□□ 0.5
XPC-205ENST00000476581 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
XPC-205ENST00000476581 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
XPC-205ENST00000476581 KIF14Q15058 1648 aa18.15■□□□□ 0.5
XPC-205ENST00000476581 ABCC2Q92887 1545 aa18.15■□□□□ 0.5
XPC-205ENST00000476581 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
XPC-205ENST00000476581 ADCY10Q96PN6 1610 aa18.14■□□□□ 0.49
XPC-205ENST00000476581 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
XPC-205ENST00000476581 ITGAEP38570 1179 aa18.12■□□□□ 0.49
XPC-205ENST00000476581 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
XPC-205ENST00000476581 ZCCHC11Q5TAX3 1644 aaKnown RBP18.1■□□□□ 0.49
XPC-205ENST00000476581 NEUROD1Q13562 356 aa18.09■□□□□ 0.49
XPC-205ENST00000476581 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
XPC-205ENST00000476581 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.49
XPC-205ENST00000476581 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
XPC-205ENST00000476581 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
XPC-205ENST00000476581 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
XPC-205ENST00000476581 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
XPC-205ENST00000476581 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
XPC-205ENST00000476581 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
XPC-205ENST00000476581 UHRF1BP1LA0JNW5 1464 aa18.04■□□□□ 0.48
XPC-205ENST00000476581 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
XPC-205ENST00000476581 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
XPC-205ENST00000476581 KDM5BQ9UGL1 1544 aa18.04■□□□□ 0.48
XPC-205ENST00000476581 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.47
XPC-205ENST00000476581 KCNH8Q96L42 1107 aa18.02■□□□□ 0.47
XPC-205ENST00000476581 GTF3C3Q9Y5Q9 886 aa18.01■□□□□ 0.47
XPC-205ENST00000476581 PTPN23Q9H3S7 1636 aa18■□□□□ 0.47
XPC-205ENST00000476581 PTPRKQ15262 1439 aa18■□□□□ 0.47
XPC-205ENST00000476581 ABCC10Q5T3U5 1492 aa17.99■□□□□ 0.47
XPC-205ENST00000476581 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
XPC-205ENST00000476581 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
XPC-205ENST00000476581 TTC37Q6PGP7 1564 aa17.98■□□□□ 0.47
XPC-205ENST00000476581 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.95■□□□□ 0.46
XPC-205ENST00000476581 CENPBP07199 599 aaPredicted RBP17.94■□□□□ 0.46
XPC-205ENST00000476581 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
XPC-205ENST00000476581 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms