RNA–Protein interactions for RNA: ENST00000476300.1

RPL13A-207, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-207ENST00000476300 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
RPL13A-207ENST00000476300 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
RPL13A-207ENST00000476300 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
RPL13A-207ENST00000476300 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
RPL13A-207ENST00000476300 ARHGAP35Q9NRY4 1499 aa15.96■□□□□ 0.14
RPL13A-207ENST00000476300 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
RPL13A-207ENST00000476300 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
RPL13A-207ENST00000476300 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
RPL13A-207ENST00000476300 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
RPL13A-207ENST00000476300 KIAA0586Q9BVV6 1533 aa15.92■□□□□ 0.14
RPL13A-207ENST00000476300 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
RPL13A-207ENST00000476300 EFCAB5A4FU69 1503 aa15.91■□□□□ 0.14
RPL13A-207ENST00000476300 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
RPL13A-207ENST00000476300 PCGF6Q9BYE7 350 aa15.89■□□□□ 0.13
RPL13A-207ENST00000476300 PPARGC1BQ86YN6 1023 aaKnown RBP15.88■□□□□ 0.13
RPL13A-207ENST00000476300 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
RPL13A-207ENST00000476300 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
RPL13A-207ENST00000476300 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
RPL13A-207ENST00000476300 NUP160Q12769 1436 aa15.84■□□□□ 0.13
RPL13A-207ENST00000476300 ATP1B4Q9UN42 357 aaPredicted RBP15.82■□□□□ 0.12
RPL13A-207ENST00000476300 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
RPL13A-207ENST00000476300 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
RPL13A-207ENST00000476300 SAMD9Q5K651 1589 aa15.79■□□□□ 0.12
RPL13A-207ENST00000476300 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.12
RPL13A-207ENST00000476300 CASKIN1Q8WXD9 1431 aa15.77■□□□□ 0.11
RPL13A-207ENST00000476300 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
RPL13A-207ENST00000476300 MAP3K1Q13233 1512 aa15.76■□□□□ 0.11
RPL13A-207ENST00000476300 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
RPL13A-207ENST00000476300 TTBK1Q5TCY1 1321 aaPredicted RBP15.73■□□□□ 0.11
RPL13A-207ENST00000476300 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
RPL13A-207ENST00000476300 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.11
RPL13A-207ENST00000476300 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
RPL13A-207ENST00000476300 CHD1O14646 1710 aa15.68■□□□□ 0.1
RPL13A-207ENST00000476300 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
RPL13A-207ENST00000476300 KIAA0556O60303 1618 aa15.66■□□□□ 0.1
RPL13A-207ENST00000476300 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
RPL13A-207ENST00000476300 TIAM1Q13009 1591 aa15.64■□□□□ 0.09
RPL13A-207ENST00000476300 CDK11AQ9UQ88 783 aaPredicted RBP15.64■□□□□ 0.09
RPL13A-207ENST00000476300 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
RPL13A-207ENST00000476300 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
RPL13A-207ENST00000476300 PTPRGP23470 1445 aa15.61■□□□□ 0.09
RPL13A-207ENST00000476300 CCDC18Q5T9S5 1454 aa15.61■□□□□ 0.09
RPL13A-207ENST00000476300 MTUS2Q5JR59 1369 aa15.6■□□□□ 0.09
RPL13A-207ENST00000476300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
RPL13A-207ENST00000476300 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
RPL13A-207ENST00000476300 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
RPL13A-207ENST00000476300 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
RPL13A-207ENST00000476300 EPRSP07814 1512 aaKnown RBP15.55■□□□□ 0.08
RPL13A-207ENST00000476300 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
RPL13A-207ENST00000476300 CFAP43Q8NDM7 1665 aa15.54■□□□□ 0.08
RPL13A-207ENST00000476300 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
RPL13A-207ENST00000476300 RAPGEF6Q8TEU7 1601 aa15.53■□□□□ 0.08
RPL13A-207ENST00000476300 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
RPL13A-207ENST00000476300 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
RPL13A-207ENST00000476300 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
RPL13A-207ENST00000476300 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
RPL13A-207ENST00000476300 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
RPL13A-207ENST00000476300 UACAQ9BZF9 1416 aa15.49■□□□□ 0.07
RPL13A-207ENST00000476300 ABCA8O94911 1581 aa15.47■□□□□ 0.07
RPL13A-207ENST00000476300 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
RPL13A-207ENST00000476300 PHLDB1Q86UU1 1377 aa15.46■□□□□ 0.07
RPL13A-207ENST00000476300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.45■□□□□ 0.06
RPL13A-207ENST00000476300 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
RPL13A-207ENST00000476300 ATP10BO94823 1461 aa15.44■□□□□ 0.06
RPL13A-207ENST00000476300 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
RPL13A-207ENST00000476300 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
RPL13A-207ENST00000476300 NCOA2Q15596 1464 aa15.43■□□□□ 0.06
RPL13A-207ENST00000476300 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
RPL13A-207ENST00000476300 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
RPL13A-207ENST00000476300 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
RPL13A-207ENST00000476300 MYOM3Q5VTT5 1437 aa15.4■□□□□ 0.06
RPL13A-207ENST00000476300 ERCC6L2Q5T890 1561 aa15.4■□□□□ 0.06
RPL13A-207ENST00000476300 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
RPL13A-207ENST00000476300 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
RPL13A-207ENST00000476300 FGD6Q6ZV73 1430 aa15.37■□□□□ 0.05
RPL13A-207ENST00000476300 MIA2Q96PC5 1412 aa15.37■□□□□ 0.05
RPL13A-207ENST00000476300 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
RPL13A-207ENST00000476300 HRCP23327 699 aa15.37■□□□□ 0.05
RPL13A-207ENST00000476300 ITGAEP38570 1179 aa15.37■□□□□ 0.05
RPL13A-207ENST00000476300 ABCC2Q92887 1545 aa15.37■□□□□ 0.05
RPL13A-207ENST00000476300 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
RPL13A-207ENST00000476300 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
RPL13A-207ENST00000476300 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
RPL13A-207ENST00000476300 KDM5BQ9UGL1 1544 aa15.3■□□□□ 0.04
RPL13A-207ENST00000476300 KCNH8Q96L42 1107 aa15.29■□□□□ 0.04
RPL13A-207ENST00000476300 TCOF1Q13428 1488 aaKnown RBP15.27■□□□□ 0.04
RPL13A-207ENST00000476300 ADCY10Q96PN6 1610 aa15.26■□□□□ 0.03
RPL13A-207ENST00000476300 GPATCH8Q9UKJ3 1502 aaKnown RBP15.26■□□□□ 0.03
RPL13A-207ENST00000476300 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
RPL13A-207ENST00000476300 RSPH4AQ5TD94 716 aa15.25■□□□□ 0.03
RPL13A-207ENST00000476300 ZNF777Q9ULD5 760 aaPredicted RBP15.25■□□□□ 0.03
RPL13A-207ENST00000476300 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
RPL13A-207ENST00000476300 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
RPL13A-207ENST00000476300 KIF14Q15058 1648 aa15.24■□□□□ 0.03
RPL13A-207ENST00000476300 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
RPL13A-207ENST00000476300 CYB5RLQ6IPT4 315 aa15.21■□□□□ 0.03
RPL13A-207ENST00000476300 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
RPL13A-207ENST00000476300 ZCCHC11Q5TAX3 1644 aaKnown RBP15.2■□□□□ 0.02
RPL13A-207ENST00000476300 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
RPL13A-207ENST00000476300 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms