RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 KIF13AQ9H1H9 1805 aa23.18■■□□□ 1.3
MRPL55-228ENST00000476267 IGF1RP08069 1367 aa23.17■■□□□ 1.3
MRPL55-228ENST00000476267 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
MRPL55-228ENST00000476267 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
MRPL55-228ENST00000476267 ADCY10Q96PN6 1610 aa23.09■■□□□ 1.29
MRPL55-228ENST00000476267 MAPKBP1O60336 1514 aa23.06■■□□□ 1.28
MRPL55-228ENST00000476267 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
MRPL55-228ENST00000476267 DIP2BQ9P265 1576 aa23■■□□□ 1.27
MRPL55-228ENST00000476267 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
MRPL55-228ENST00000476267 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
MRPL55-228ENST00000476267 NPM1P06748 294 aaKnown RBP eCLIP22.88■■□□□ 1.25
MRPL55-228ENST00000476267 FAM69CQ0P6D2 419 aa22.87■■□□□ 1.25
MRPL55-228ENST00000476267 PTPRGP23470 1445 aa22.85■■□□□ 1.25
MRPL55-228ENST00000476267 DISP1Q96F81 1524 aa22.84■■□□□ 1.25
MRPL55-228ENST00000476267 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
MRPL55-228ENST00000476267 CARMIL2Q6F5E8 1435 aa22.83■■□□□ 1.25
MRPL55-228ENST00000476267 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
MRPL55-228ENST00000476267 RAPGEF2Q9Y4G8 1499 aa22.81■■□□□ 1.24
MRPL55-228ENST00000476267 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
MRPL55-228ENST00000476267 UGGT2Q9NYU1 1516 aa22.8■■□□□ 1.24
MRPL55-228ENST00000476267 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
MRPL55-228ENST00000476267 KDM6BO15054 1643 aa22.75■■□□□ 1.23
MRPL55-228ENST00000476267 TSPOAP1O95153 1857 aa22.75■■□□□ 1.23
MRPL55-228ENST00000476267 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
MRPL55-228ENST00000476267 GLI2P10070 1586 aa22.73■■□□□ 1.23
MRPL55-228ENST00000476267 PPRC1Q5VV67 1664 aaKnown RBP22.73■■□□□ 1.23
MRPL55-228ENST00000476267 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
MRPL55-228ENST00000476267 CTTNBP2Q8WZ74 1663 aa22.71■■□□□ 1.23
MRPL55-228ENST00000476267 ASXL2Q76L83 1435 aa22.71■■□□□ 1.23
MRPL55-228ENST00000476267 KDM5BQ9UGL1 1544 aa22.7■■□□□ 1.22
MRPL55-228ENST00000476267 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
MRPL55-228ENST00000476267 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
MRPL55-228ENST00000476267 ZCCHC11Q5TAX3 1644 aaKnown RBP22.66■■□□□ 1.22
MRPL55-228ENST00000476267 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
MRPL55-228ENST00000476267 MAP3K4Q9Y6R4 1608 aa22.62■■□□□ 1.21
MRPL55-228ENST00000476267 EPRSP07814 1512 aaKnown RBP22.61■■□□□ 1.21
MRPL55-228ENST00000476267 ABCA8O94911 1581 aa22.55■■□□□ 1.2
MRPL55-228ENST00000476267 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
MRPL55-228ENST00000476267 KDM4FA0A1W2PPD8 638 aa22.51■■□□□ 1.19
MRPL55-228ENST00000476267 COL17A1Q9UMD9 1497 aaPredicted RBP22.51■■□□□ 1.19
MRPL55-228ENST00000476267 WDR7Q9Y4E6 1490 aa22.5■■□□□ 1.19
MRPL55-228ENST00000476267 TEX14Q8IWB6 1497 aa22.46■■□□□ 1.19
MRPL55-228ENST00000476267 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
MRPL55-228ENST00000476267 SAMD9Q5K651 1589 aa22.4■■□□□ 1.18
MRPL55-228ENST00000476267 MAGI3Q5TCQ9 1506 aa22.38■■□□□ 1.17
MRPL55-228ENST00000476267 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
MRPL55-228ENST00000476267 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
MRPL55-228ENST00000476267 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
MRPL55-228ENST00000476267 ATP10BO94823 1461 aa22.3■■□□□ 1.16
MRPL55-228ENST00000476267 EEA1Q15075 1411 aa22.28■■□□□ 1.16
MRPL55-228ENST00000476267 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
MRPL55-228ENST00000476267 ABCA9Q8IUA7 1624 aa22.26■■□□□ 1.15
MRPL55-228ENST00000476267 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
MRPL55-228ENST00000476267 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
MRPL55-228ENST00000476267 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
MRPL55-228ENST00000476267 NUP153P49790 1475 aaKnown RBP22.19■■□□□ 1.14
MRPL55-228ENST00000476267 KIF21BO75037 1637 aa22.18■■□□□ 1.14
MRPL55-228ENST00000476267 ARID3CA6NKF2 412 aa22.16■■□□□ 1.14
MRPL55-228ENST00000476267 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.13
MRPL55-228ENST00000476267 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
MRPL55-228ENST00000476267 EFCAB5A4FU69 1503 aa22.11■■□□□ 1.13
MRPL55-228ENST00000476267 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
MRPL55-228ENST00000476267 NEO1Q92859 1461 aa22.09■■□□□ 1.13
MRPL55-228ENST00000476267 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.13
MRPL55-228ENST00000476267 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.12
MRPL55-228ENST00000476267 ADAMTSL3P82987 1691 aa22.01■■□□□ 1.11
MRPL55-228ENST00000476267 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
MRPL55-228ENST00000476267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22■■□□□ 1.11
MRPL55-228ENST00000476267 RICTORQ6R327 1708 aa21.99■■□□□ 1.11
MRPL55-228ENST00000476267 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
MRPL55-228ENST00000476267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
MRPL55-228ENST00000476267 RAPGEF3O95398 923 aa21.97■■□□□ 1.11
MRPL55-228ENST00000476267 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
MRPL55-228ENST00000476267 CFAP74Q9C0B2 1584 aa21.95■■□□□ 1.11
MRPL55-228ENST00000476267 CDK13Q14004 1512 aaKnown RBP21.95■■□□□ 1.1
MRPL55-228ENST00000476267 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
MRPL55-228ENST00000476267 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
MRPL55-228ENST00000476267 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
MRPL55-228ENST00000476267 FANCAO15360 1455 aa21.91■■□□□ 1.1
MRPL55-228ENST00000476267 ARHGAP35Q9NRY4 1499 aa21.9■■□□□ 1.1
MRPL55-228ENST00000476267 AKNAQ7Z591 1439 aa21.9■■□□□ 1.1
MRPL55-228ENST00000476267 ZMYM4Q5VZL5 1548 aa21.9■■□□□ 1.1
MRPL55-228ENST00000476267 HECW1Q76N89 1606 aa21.89■■□□□ 1.09
MRPL55-228ENST00000476267 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.09
MRPL55-228ENST00000476267 PTPRMP28827 1452 aa21.89■■□□□ 1.09
MRPL55-228ENST00000476267 MADDQ8WXG6 1647 aa21.88■■□□□ 1.09
MRPL55-228ENST00000476267 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
MRPL55-228ENST00000476267 FMN1Q68DA7 1419 aa21.86■■□□□ 1.09
MRPL55-228ENST00000476267 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
MRPL55-228ENST00000476267 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
MRPL55-228ENST00000476267 PLCH2O75038 1416 aa21.82■■□□□ 1.08
MRPL55-228ENST00000476267 KIF14Q15058 1648 aa21.8■■□□□ 1.08
MRPL55-228ENST00000476267 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
MRPL55-228ENST00000476267 ILDR1Q86SU0 546 aaPredicted RBP21.8■■□□□ 1.08
MRPL55-228ENST00000476267 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
MRPL55-228ENST00000476267 ZFYVE16Q7Z3T8 1539 aa21.79■■□□□ 1.08
MRPL55-228ENST00000476267 MAGI2Q86UL8 1455 aa21.78■■□□□ 1.08
MRPL55-228ENST00000476267 YEATS2Q9ULM3 1422 aa21.78■■□□□ 1.08
MRPL55-228ENST00000476267 RIMS1Q86UR5 1692 aaKnown RBP21.77■■□□□ 1.08
MRPL55-228ENST00000476267 POGZQ7Z3K3 1410 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms