RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 CUL7Q14999 1698 aa24.48■■□□□ 1.51
SLC48A1-204ENST00000476104 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
SLC48A1-204ENST00000476104 KIAA0586Q9BVV6 1533 aa24.42■■□□□ 1.5
SLC48A1-204ENST00000476104 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
SLC48A1-204ENST00000476104 NPM1P06748 294 aaKnown RBP eCLIP24.33■■□□□ 1.49
SLC48A1-204ENST00000476104 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
SLC48A1-204ENST00000476104 PTPRGP23470 1445 aa24.2■■□□□ 1.46
SLC48A1-204ENST00000476104 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.46
SLC48A1-204ENST00000476104 IQGAP2Q13576 1575 aa24.2■■□□□ 1.46
SLC48A1-204ENST00000476104 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
SLC48A1-204ENST00000476104 ADCY10Q96PN6 1610 aa24.18■■□□□ 1.46
SLC48A1-204ENST00000476104 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
SLC48A1-204ENST00000476104 FAM69CQ0P6D2 419 aa24.15■■□□□ 1.46
SLC48A1-204ENST00000476104 MAPKBP1O60336 1514 aa24.15■■□□□ 1.46
SLC48A1-204ENST00000476104 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.46
SLC48A1-204ENST00000476104 ABCC10Q5T3U5 1492 aa24.12■■□□□ 1.45
SLC48A1-204ENST00000476104 DISP1Q96F81 1524 aa24.04■■□□□ 1.44
SLC48A1-204ENST00000476104 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
SLC48A1-204ENST00000476104 UGGT2Q9NYU1 1516 aa24.03■■□□□ 1.44
SLC48A1-204ENST00000476104 ABCC2Q92887 1545 aa24.01■■□□□ 1.43
SLC48A1-204ENST00000476104 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
SLC48A1-204ENST00000476104 UACAQ9BZF9 1416 aa24■■□□□ 1.43
SLC48A1-204ENST00000476104 UHRF1BP1LA0JNW5 1464 aa23.98■■□□□ 1.43
SLC48A1-204ENST00000476104 KIAA0556O60303 1618 aa23.95■■□□□ 1.43
SLC48A1-204ENST00000476104 CTTNBP2Q8WZ74 1663 aa23.95■■□□□ 1.42
SLC48A1-204ENST00000476104 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
SLC48A1-204ENST00000476104 PLB1Q6P1J6 1458 aa23.94■■□□□ 1.42
SLC48A1-204ENST00000476104 ASXL2Q76L83 1435 aa23.93■■□□□ 1.42
SLC48A1-204ENST00000476104 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
SLC48A1-204ENST00000476104 TSPOAP1O95153 1857 aa23.9■■□□□ 1.42
SLC48A1-204ENST00000476104 CSRNP3Q8WYN3 585 aa23.88■■□□□ 1.41
SLC48A1-204ENST00000476104 KDM5BQ9UGL1 1544 aa23.86■■□□□ 1.41
SLC48A1-204ENST00000476104 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
SLC48A1-204ENST00000476104 KDM6BO15054 1643 aa23.82■■□□□ 1.4
SLC48A1-204ENST00000476104 GLI2P10070 1586 aa23.81■■□□□ 1.4
SLC48A1-204ENST00000476104 ZCCHC11Q5TAX3 1644 aaKnown RBP23.8■■□□□ 1.4
SLC48A1-204ENST00000476104 EEA1Q15075 1411 aa23.78■■□□□ 1.4
SLC48A1-204ENST00000476104 EPRSP07814 1512 aaKnown RBP23.76■■□□□ 1.39
SLC48A1-204ENST00000476104 P3H3Q8IVL6 736 aa23.73■■□□□ 1.39
SLC48A1-204ENST00000476104 ABCA8O94911 1581 aa23.72■■□□□ 1.39
SLC48A1-204ENST00000476104 WDR7Q9Y4E6 1490 aa23.71■■□□□ 1.39
SLC48A1-204ENST00000476104 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
SLC48A1-204ENST00000476104 TEX14Q8IWB6 1497 aa23.67■■□□□ 1.38
SLC48A1-204ENST00000476104 MAP3K4Q9Y6R4 1608 aa23.66■■□□□ 1.38
SLC48A1-204ENST00000476104 KCNH8Q96L42 1107 aa23.66■■□□□ 1.38
SLC48A1-204ENST00000476104 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
SLC48A1-204ENST00000476104 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
SLC48A1-204ENST00000476104 SAMD9Q5K651 1589 aa23.6■■□□□ 1.37
SLC48A1-204ENST00000476104 CD109Q6YHK3 1445 aa23.58■■□□□ 1.36
SLC48A1-204ENST00000476104 ATP10BO94823 1461 aa23.55■■□□□ 1.36
SLC48A1-204ENST00000476104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.54■■□□□ 1.36
SLC48A1-204ENST00000476104 HNRNPUL2Q1KMD3 747 aaKnown RBP23.54■■□□□ 1.36
SLC48A1-204ENST00000476104 COL17A1Q9UMD9 1497 aaPredicted RBP23.54■■□□□ 1.36
SLC48A1-204ENST00000476104 CFAP43Q8NDM7 1665 aa23.54■■□□□ 1.36
SLC48A1-204ENST00000476104 KIF21BO75037 1637 aa23.53■■□□□ 1.36
SLC48A1-204ENST00000476104 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
SLC48A1-204ENST00000476104 KDM4FA0A1W2PPD8 638 aa23.52■■□□□ 1.36
SLC48A1-204ENST00000476104 MAGI3Q5TCQ9 1506 aa23.52■■□□□ 1.36
SLC48A1-204ENST00000476104 RAPGEF6Q8TEU7 1601 aa23.51■■□□□ 1.35
SLC48A1-204ENST00000476104 FHOD3Q2V2M9 1422 aa23.5■■□□□ 1.35
SLC48A1-204ENST00000476104 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
SLC48A1-204ENST00000476104 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
SLC48A1-204ENST00000476104 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
SLC48A1-204ENST00000476104 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
SLC48A1-204ENST00000476104 PLEKHD1A6NEE1 506 aa23.39■■□□□ 1.33
SLC48A1-204ENST00000476104 ABCA9Q8IUA7 1624 aa23.37■■□□□ 1.33
SLC48A1-204ENST00000476104 ADGRL1O94910 1474 aa23.37■■□□□ 1.33
SLC48A1-204ENST00000476104 PHLDB1Q86UU1 1377 aa23.35■■□□□ 1.33
SLC48A1-204ENST00000476104 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.33
SLC48A1-204ENST00000476104 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
SLC48A1-204ENST00000476104 NEO1Q92859 1461 aa23.29■■□□□ 1.32
SLC48A1-204ENST00000476104 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
SLC48A1-204ENST00000476104 RAPGEF3O95398 923 aa23.23■■□□□ 1.31
SLC48A1-204ENST00000476104 ARHGAP35Q9NRY4 1499 aa23.23■■□□□ 1.31
SLC48A1-204ENST00000476104 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
SLC48A1-204ENST00000476104 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
SLC48A1-204ENST00000476104 HECW1Q76N89 1606 aa23.19■■□□□ 1.3
SLC48A1-204ENST00000476104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
SLC48A1-204ENST00000476104 FANCAO15360 1455 aa23.16■■□□□ 1.3
SLC48A1-204ENST00000476104 AKNAQ7Z591 1439 aa23.15■■□□□ 1.3
SLC48A1-204ENST00000476104 DENND4BO75064 1496 aaPredicted RBP23.14■■□□□ 1.29
SLC48A1-204ENST00000476104 CFAP74Q9C0B2 1584 aa23.14■■□□□ 1.29
SLC48A1-204ENST00000476104 TTC37Q6PGP7 1564 aa23.13■■□□□ 1.29
SLC48A1-204ENST00000476104 ARID4BQ4LE39 1312 aaPredicted RBP23.1■■□□□ 1.29
SLC48A1-204ENST00000476104 FRMPD1Q5SYB0 1578 aa23.09■■□□□ 1.29
SLC48A1-204ENST00000476104 PLCH2O75038 1416 aa23.07■■□□□ 1.28
SLC48A1-204ENST00000476104 CLIP1P30622 1438 aa23.06■■□□□ 1.28
SLC48A1-204ENST00000476104 EFCAB2Q5VUJ9 269 aa23.04■■□□□ 1.28
SLC48A1-204ENST00000476104 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
SLC48A1-204ENST00000476104 RICTORQ6R327 1708 aa23.03■■□□□ 1.28
SLC48A1-204ENST00000476104 KIF14Q15058 1648 aa23.01■■□□□ 1.27
SLC48A1-204ENST00000476104 SCAPERQ9BY12 1400 aa23.01■■□□□ 1.27
SLC48A1-204ENST00000476104 CASKIN1Q8WXD9 1431 aa23■■□□□ 1.27
SLC48A1-204ENST00000476104 ARHGEF40Q8TER5 1519 aa23■■□□□ 1.27
SLC48A1-204ENST00000476104 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
SLC48A1-204ENST00000476104 HECW2Q9P2P5 1572 aa22.98■■□□□ 1.27
SLC48A1-204ENST00000476104 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
SLC48A1-204ENST00000476104 ADAMTSL3P82987 1691 aa22.97■■□□□ 1.27
SLC48A1-204ENST00000476104 ZMYM4Q5VZL5 1548 aa22.97■■□□□ 1.27
SLC48A1-204ENST00000476104 PCF11O94913 1555 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms