RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 NUP160Q12769 1436 aa30.69■■■□□ 2.5
NR1H3-219ENST00000476086 CEP170Q5SW79 1584 aa30.67■■■□□ 2.5
NR1H3-219ENST00000476086 KIAA0586Q9BVV6 1533 aa30.63■■■□□ 2.49
NR1H3-219ENST00000476086 IQGAP2Q13576 1575 aa30.6■■■□□ 2.49
NR1H3-219ENST00000476086 OSCARQ8IYS5 282 aa30.55■■■□□ 2.48
NR1H3-219ENST00000476086 CLASP1Q7Z460 1538 aa30.5■■■□□ 2.47
NR1H3-219ENST00000476086 CEP162Q5TB80 1403 aa30.45■■■□□ 2.46
NR1H3-219ENST00000476086 UGGT2Q9NYU1 1516 aa30.43■■■□□ 2.46
NR1H3-219ENST00000476086 CLIP1P30622 1438 aa30.4■■■□□ 2.46
NR1H3-219ENST00000476086 EFCAB5A4FU69 1503 aa30.4■■■□□ 2.46
NR1H3-219ENST00000476086 SHROOM2Q13796 1616 aa30.4■■■□□ 2.46
NR1H3-219ENST00000476086 JPH4Q96JJ6 628 aa30.39■■■□□ 2.46
NR1H3-219ENST00000476086 RANGAP1P46060 587 aaPredicted RBP30.38■■■□□ 2.45
NR1H3-219ENST00000476086 SAMD9Q5K651 1589 aa30.33■■■□□ 2.45
NR1H3-219ENST00000476086 CARMIL2Q6F5E8 1435 aa30.32■■■□□ 2.44
NR1H3-219ENST00000476086 ARHGAP35Q9NRY4 1499 aa30.29■■■□□ 2.44
NR1H3-219ENST00000476086 KIAA0556O60303 1618 aa30.27■■■□□ 2.44
NR1H3-219ENST00000476086 PRG4Q92954 1404 aaPredicted RBP30.27■■■□□ 2.44
NR1H3-219ENST00000476086 DISP1Q96F81 1524 aa30.26■■■□□ 2.43
NR1H3-219ENST00000476086 P3H3Q8IVL6 736 aa30.17■■■□□ 2.42
NR1H3-219ENST00000476086 FHOD3Q2V2M9 1422 aa30.15■■■□□ 2.42
NR1H3-219ENST00000476086 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
NR1H3-219ENST00000476086 FMN1Q68DA7 1419 aa30.11■■■□□ 2.41
NR1H3-219ENST00000476086 ERCC6L2Q5T890 1561 aa30.09■■■□□ 2.41
NR1H3-219ENST00000476086 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
NR1H3-219ENST00000476086 PTPRGP23470 1445 aa30.03■■■□□ 2.4
NR1H3-219ENST00000476086 ARHGEF11O15085 1522 aa30.02■■■□□ 2.4
NR1H3-219ENST00000476086 TTBK1Q5TCY1 1321 aaPredicted RBP29.96■■■□□ 2.39
NR1H3-219ENST00000476086 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
NR1H3-219ENST00000476086 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
NR1H3-219ENST00000476086 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
NR1H3-219ENST00000476086 RAPGEF6Q8TEU7 1601 aa29.92■■■□□ 2.38
NR1H3-219ENST00000476086 FYCO1Q9BQS8 1478 aa29.92■■■□□ 2.38
NR1H3-219ENST00000476086 PCF11O94913 1555 aaKnown RBP29.91■■■□□ 2.38
NR1H3-219ENST00000476086 CASKIN1Q8WXD9 1431 aa29.91■■■□□ 2.38
NR1H3-219ENST00000476086 HECW1Q76N89 1606 aa29.89■■■□□ 2.37
NR1H3-219ENST00000476086 ABCA8O94911 1581 aa29.88■■■□□ 2.37
NR1H3-219ENST00000476086 UACAQ9BZF9 1416 aa29.85■■■□□ 2.37
NR1H3-219ENST00000476086 PLB1Q6P1J6 1458 aa29.85■■■□□ 2.37
NR1H3-219ENST00000476086 ATP1B4Q9UN42 357 aaPredicted RBP29.82■■■□□ 2.36
NR1H3-219ENST00000476086 APLP2Q06481 763 aa29.8■■■□□ 2.36
NR1H3-219ENST00000476086 ABCC2Q92887 1545 aa29.8■■■□□ 2.36
NR1H3-219ENST00000476086 UHRF1BP1LA0JNW5 1464 aa29.79■■■□□ 2.36
NR1H3-219ENST00000476086 CCDC18Q5T9S5 1454 aa29.76■■■□□ 2.35
NR1H3-219ENST00000476086 NUP153P49790 1475 aaKnown RBP29.74■■■□□ 2.35
NR1H3-219ENST00000476086 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
NR1H3-219ENST00000476086 LRRIQ1Q96JM4 1722 aa29.73■■■□□ 2.35
NR1H3-219ENST00000476086 MAP3K1Q13233 1512 aa29.72■■■□□ 2.35
NR1H3-219ENST00000476086 ADCY10Q96PN6 1610 aa29.71■■■□□ 2.35
NR1H3-219ENST00000476086 EPRSP07814 1512 aaKnown RBP29.71■■■□□ 2.35
NR1H3-219ENST00000476086 CFAP43Q8NDM7 1665 aa29.69■■■□□ 2.34
NR1H3-219ENST00000476086 CYB5RLQ6IPT4 315 aa29.69■■■□□ 2.34
NR1H3-219ENST00000476086 TIAM1Q13009 1591 aa29.67■■■□□ 2.34
NR1H3-219ENST00000476086 KDM5BQ9UGL1 1544 aa29.63■■■□□ 2.33
NR1H3-219ENST00000476086 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
NR1H3-219ENST00000476086 ATP10BO94823 1461 aa29.61■■■□□ 2.33
NR1H3-219ENST00000476086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.61■■■□□ 2.33
NR1H3-219ENST00000476086 HNRNPUL2Q1KMD3 747 aaKnown RBP29.61■■■□□ 2.33
NR1H3-219ENST00000476086 ZCCHC11Q5TAX3 1644 aaKnown RBP29.6■■■□□ 2.33
NR1H3-219ENST00000476086 NPM1P06748 294 aaKnown RBP eCLIP29.6■■■□□ 2.33
NR1H3-219ENST00000476086 CDK11AQ9UQ88 783 aaPredicted RBP29.6■■■□□ 2.33
NR1H3-219ENST00000476086 ARID3CA6NKF2 412 aa29.58■■■□□ 2.33
NR1H3-219ENST00000476086 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
NR1H3-219ENST00000476086 LRRC9Q6ZRR7 1453 aa29.51■■■□□ 2.31
NR1H3-219ENST00000476086 PLEKHD1A6NEE1 506 aa29.5■■■□□ 2.31
NR1H3-219ENST00000476086 EHBP1L1Q8N3D4 1523 aa29.5■■■□□ 2.31
NR1H3-219ENST00000476086 KANK4Q5T7N3 995 aaPredicted RBP29.44■■■□□ 2.3
NR1H3-219ENST00000476086 TROQ12816 1431 aaPredicted RBP29.44■■■□□ 2.3
NR1H3-219ENST00000476086 MAGI3Q5TCQ9 1506 aa29.42■■■□□ 2.3
NR1H3-219ENST00000476086 SUPT6HQ7KZ85 1726 aaKnown RBP29.41■■■□□ 2.3
NR1H3-219ENST00000476086 MAPKBP1O60336 1514 aa29.39■■■□□ 2.3
NR1H3-219ENST00000476086 ASXL2Q76L83 1435 aa29.37■■■□□ 2.29
NR1H3-219ENST00000476086 WDR7Q9Y4E6 1490 aa29.37■■■□□ 2.29
NR1H3-219ENST00000476086 KIF14Q15058 1648 aa29.37■■■□□ 2.29
NR1H3-219ENST00000476086 PPARGC1BQ86YN6 1023 aaKnown RBP29.36■■■□□ 2.29
NR1H3-219ENST00000476086 NCOA2Q15596 1464 aa29.28■■■□□ 2.28
NR1H3-219ENST00000476086 KCNH8Q96L42 1107 aa29.25■■■□□ 2.27
NR1H3-219ENST00000476086 ITSN2Q9NZM3 1697 aa29.2■■■□□ 2.26
NR1H3-219ENST00000476086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.19■■■□□ 2.26
NR1H3-219ENST00000476086 ABCC10Q5T3U5 1492 aa29.18■■■□□ 2.26
NR1H3-219ENST00000476086 CCNB3Q8WWL7 1395 aa29.18■■■□□ 2.26
NR1H3-219ENST00000476086 ABCA9Q8IUA7 1624 aa29.18■■■□□ 2.26
NR1H3-219ENST00000476086 MYO5CQ9NQX4 1742 aa29.16■■■□□ 2.26
NR1H3-219ENST00000476086 TTC37Q6PGP7 1564 aa29.15■■■□□ 2.26
NR1H3-219ENST00000476086 MYOM3Q5VTT5 1437 aa29.14■■■□□ 2.26
NR1H3-219ENST00000476086 CDC42BPAQ5VT25 1732 aa29.14■■■□□ 2.25
NR1H3-219ENST00000476086 PHLDB1Q86UU1 1377 aa29.13■■■□□ 2.25
NR1H3-219ENST00000476086 GLI2P10070 1586 aa29.13■■■□□ 2.25
NR1H3-219ENST00000476086 DIP2BQ9P265 1576 aa29.12■■■□□ 2.25
NR1H3-219ENST00000476086 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
NR1H3-219ENST00000476086 GPATCH8Q9UKJ3 1502 aaKnown RBP29.09■■■□□ 2.25
NR1H3-219ENST00000476086 MIA2Q96PC5 1412 aa29.07■■■□□ 2.24
NR1H3-219ENST00000476086 ARAP3Q8WWN8 1544 aa29.05■■■□□ 2.24
NR1H3-219ENST00000476086 CDC42BPBQ9Y5S2 1711 aa29.05■■■□□ 2.24
NR1H3-219ENST00000476086 FGD6Q6ZV73 1430 aa29.04■■■□□ 2.24
NR1H3-219ENST00000476086 KIF13AQ9H1H9 1805 aa29.04■■■□□ 2.24
NR1H3-219ENST00000476086 MAP3K4Q9Y6R4 1608 aa29.04■■■□□ 2.24
NR1H3-219ENST00000476086 FAM69CQ0P6D2 419 aa29.03■■■□□ 2.24
NR1H3-219ENST00000476086 CFDP1Q9UEE9 299 aaPredicted RBP29.03■■■□□ 2.24
NR1H3-219ENST00000476086 PLCH2O75038 1416 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms