RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 CYB5RLQ6IPT4 315 aa32.42■■■□□ 2.78
PDE6B-209ENST00000476034 ERCC6L2Q5T890 1561 aa32.41■■■□□ 2.78
PDE6B-209ENST00000476034 CHIC1Q5VXU3 224 aa32.4■■■□□ 2.78
PDE6B-209ENST00000476034 EEA1Q15075 1411 aa32.36■■■□□ 2.77
PDE6B-209ENST00000476034 JPH4Q96JJ6 628 aa32.35■■■□□ 2.77
PDE6B-209ENST00000476034 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
PDE6B-209ENST00000476034 PRXQ9BXM0 1461 aa32.33■■■□□ 2.77
PDE6B-209ENST00000476034 IQGAP2Q13576 1575 aa32.3■■■□□ 2.76
PDE6B-209ENST00000476034 CTTNBP2Q8WZ74 1663 aa32.24■■■□□ 2.75
PDE6B-209ENST00000476034 CSRNP3Q8WYN3 585 aa32.24■■■□□ 2.75
PDE6B-209ENST00000476034 UGGT2Q9NYU1 1516 aa32.1■■■□□ 2.73
PDE6B-209ENST00000476034 CARMIL2Q6F5E8 1435 aa32.09■■■□□ 2.73
PDE6B-209ENST00000476034 FAM9AQ8IZU1 332 aaPredicted RBP32.09■■■□□ 2.73
PDE6B-209ENST00000476034 KIF21BO75037 1637 aa32.06■■■□□ 2.72
PDE6B-209ENST00000476034 DISP1Q96F81 1524 aa32.03■■■□□ 2.72
PDE6B-209ENST00000476034 KIAA0556O60303 1618 aa32■■■□□ 2.71
PDE6B-209ENST00000476034 TNIKQ9UKE5 1360 aa31.97■■■□□ 2.71
PDE6B-209ENST00000476034 PTPRGP23470 1445 aa31.93■■■□□ 2.7
PDE6B-209ENST00000476034 GOLGA3Q08378 1498 aa31.93■■■□□ 2.7
PDE6B-209ENST00000476034 ADCY10Q96PN6 1610 aa31.91■■■□□ 2.7
PDE6B-209ENST00000476034 TTBK1Q5TCY1 1321 aaPredicted RBP31.81■■■□□ 2.68
PDE6B-209ENST00000476034 SAMD9Q5K651 1589 aa31.79■■■□□ 2.68
PDE6B-209ENST00000476034 TRHP20396 242 aaPredicted RBP31.77■■■□□ 2.68
PDE6B-209ENST00000476034 UACAQ9BZF9 1416 aa31.75■■■□□ 2.67
PDE6B-209ENST00000476034 UHRF1BP1LA0JNW5 1464 aa31.75■■■□□ 2.67
PDE6B-209ENST00000476034 NPM1P06748 294 aaKnown RBP eCLIP31.73■■■□□ 2.67
PDE6B-209ENST00000476034 ABCC2Q92887 1545 aa31.73■■■□□ 2.67
PDE6B-209ENST00000476034 MAPKBP1O60336 1514 aa31.72■■■□□ 2.67
PDE6B-209ENST00000476034 UBTFP17480 764 aaKnown RBP31.66■■■□□ 2.66
PDE6B-209ENST00000476034 EHMT2Q96KQ7 1210 aa31.66■■■□□ 2.66
PDE6B-209ENST00000476034 EFCAB5A4FU69 1503 aa31.65■■■□□ 2.66
PDE6B-209ENST00000476034 ABCA8O94911 1581 aa31.63■■■□□ 2.65
PDE6B-209ENST00000476034 PLB1Q6P1J6 1458 aa31.62■■■□□ 2.65
PDE6B-209ENST00000476034 P3H3Q8IVL6 736 aa31.6■■■□□ 2.65
PDE6B-209ENST00000476034 KDM5BQ9UGL1 1544 aa31.59■■■□□ 2.65
PDE6B-209ENST00000476034 KIF13AQ9H1H9 1805 aa31.59■■■□□ 2.65
PDE6B-209ENST00000476034 RANGAP1P46060 587 aaPredicted RBP31.59■■■□□ 2.65
PDE6B-209ENST00000476034 ZCCHC11Q5TAX3 1644 aaKnown RBP31.57■■■□□ 2.64
PDE6B-209ENST00000476034 ABCC10Q5T3U5 1492 aa31.53■■■□□ 2.64
PDE6B-209ENST00000476034 DIP2BQ9P265 1576 aa31.52■■■□□ 2.64
PDE6B-209ENST00000476034 FHOD3Q2V2M9 1422 aa31.52■■■□□ 2.64
PDE6B-209ENST00000476034 RAPGEF6Q8TEU7 1601 aa31.48■■■□□ 2.63
PDE6B-209ENST00000476034 ASXL2Q76L83 1435 aa31.48■■■□□ 2.63
PDE6B-209ENST00000476034 ARHGAP35Q9NRY4 1499 aa31.42■■■□□ 2.62
PDE6B-209ENST00000476034 FAM69CQ0P6D2 419 aa31.4■■■□□ 2.62
PDE6B-209ENST00000476034 GLI2P10070 1586 aa31.34■■■□□ 2.61
PDE6B-209ENST00000476034 WDR7Q9Y4E6 1490 aa31.34■■■□□ 2.61
PDE6B-209ENST00000476034 ATP10BO94823 1461 aa31.33■■■□□ 2.61
PDE6B-209ENST00000476034 NUP153P49790 1475 aaKnown RBP31.32■■■□□ 2.6
PDE6B-209ENST00000476034 FMN1Q68DA7 1419 aa31.31■■■□□ 2.6
PDE6B-209ENST00000476034 EPRSP07814 1512 aaKnown RBP31.3■■■□□ 2.6
PDE6B-209ENST00000476034 ARID3CA6NKF2 412 aa31.25■■■□□ 2.59
PDE6B-209ENST00000476034 TSPOAP1O95153 1857 aa31.25■■■□□ 2.59
PDE6B-209ENST00000476034 CLIP1P30622 1438 aa31.23■■■□□ 2.59
PDE6B-209ENST00000476034 MAP3K4Q9Y6R4 1608 aa31.22■■■□□ 2.59
PDE6B-209ENST00000476034 HECW1Q76N89 1606 aa31.21■■■□□ 2.59
PDE6B-209ENST00000476034 PPRC1Q5VV67 1664 aaKnown RBP31.16■■■□□ 2.58
PDE6B-209ENST00000476034 CFAP43Q8NDM7 1665 aa31.15■■■□□ 2.58
PDE6B-209ENST00000476034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.14■■■□□ 2.58
PDE6B-209ENST00000476034 HNRNPUL2Q1KMD3 747 aaKnown RBP31.14■■■□□ 2.58
PDE6B-209ENST00000476034 KCNH8Q96L42 1107 aa31.1■■■□□ 2.57
PDE6B-209ENST00000476034 PCF11O94913 1555 aaKnown RBP31.09■■■□□ 2.57
PDE6B-209ENST00000476034 CDK13Q14004 1512 aaKnown RBP31.09■■■□□ 2.57
PDE6B-209ENST00000476034 CEP162Q5TB80 1403 aa31.09■■■□□ 2.57
PDE6B-209ENST00000476034 CASKIN1Q8WXD9 1431 aa31.06■■■□□ 2.56
PDE6B-209ENST00000476034 ABCA9Q8IUA7 1624 aa31.06■■■□□ 2.56
PDE6B-209ENST00000476034 LRRIQ1Q96JM4 1722 aa31.05■■■□□ 2.56
PDE6B-209ENST00000476034 TEX14Q8IWB6 1497 aa31.05■■■□□ 2.56
PDE6B-209ENST00000476034 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
PDE6B-209ENST00000476034 ATP1B4Q9UN42 357 aaPredicted RBP31.04■■■□□ 2.56
PDE6B-209ENST00000476034 KDM6BO15054 1643 aa31.02■■■□□ 2.56
PDE6B-209ENST00000476034 CD109Q6YHK3 1445 aa31.02■■■□□ 2.56
PDE6B-209ENST00000476034 PLEKHD1A6NEE1 506 aa31.02■■■□□ 2.56
PDE6B-209ENST00000476034 FYCO1Q9BQS8 1478 aa31.01■■■□□ 2.56
PDE6B-209ENST00000476034 MAGI3Q5TCQ9 1506 aa31■■■□□ 2.55
PDE6B-209ENST00000476034 CCDC18Q5T9S5 1454 aa30.97■■■□□ 2.55
PDE6B-209ENST00000476034 CDK11AQ9UQ88 783 aaPredicted RBP30.91■■■□□ 2.54
PDE6B-209ENST00000476034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.88■■■□□ 2.53
PDE6B-209ENST00000476034 TTC37Q6PGP7 1564 aa30.87■■■□□ 2.53
PDE6B-209ENST00000476034 TROQ12816 1431 aaPredicted RBP30.85■■■□□ 2.53
PDE6B-209ENST00000476034 KIF14Q15058 1648 aa30.84■■■□□ 2.53
PDE6B-209ENST00000476034 COL17A1Q9UMD9 1497 aaPredicted RBP30.78■■■□□ 2.52
PDE6B-209ENST00000476034 NEO1Q92859 1461 aa30.77■■■□□ 2.52
PDE6B-209ENST00000476034 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.52
PDE6B-209ENST00000476034 PHLDB1Q86UU1 1377 aa30.76■■■□□ 2.51
PDE6B-209ENST00000476034 MYO5CQ9NQX4 1742 aa30.76■■■□□ 2.51
PDE6B-209ENST00000476034 ARAP3Q8WWN8 1544 aa30.73■■■□□ 2.51
PDE6B-209ENST00000476034 VPS8Q8N3P4 1428 aa30.73■■■□□ 2.51
PDE6B-209ENST00000476034 FANCAO15360 1455 aa30.69■■■□□ 2.5
PDE6B-209ENST00000476034 PLCH2O75038 1416 aa30.68■■■□□ 2.5
PDE6B-209ENST00000476034 AKNAQ7Z591 1439 aa30.62■■■□□ 2.49
PDE6B-209ENST00000476034 PREX2Q70Z35 1606 aa30.6■■■□□ 2.49
PDE6B-209ENST00000476034 EHBP1L1Q8N3D4 1523 aa30.6■■■□□ 2.49
PDE6B-209ENST00000476034 MTUS2Q5JR59 1369 aa30.59■■■□□ 2.49
PDE6B-209ENST00000476034 TIAM1Q13009 1591 aa30.58■■■□□ 2.49
PDE6B-209ENST00000476034 CDC42BPBQ9Y5S2 1711 aa30.58■■■□□ 2.49
PDE6B-209ENST00000476034 ARHGAP5Q13017 1502 aa30.57■■■□□ 2.48
PDE6B-209ENST00000476034 CDC42BPAQ5VT25 1732 aa30.56■■■□□ 2.48
PDE6B-209ENST00000476034 FRMPD1Q5SYB0 1578 aa30.56■■■□□ 2.48
PDE6B-209ENST00000476034 RICTORQ6R327 1708 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms