RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 CLIP1P30622 1438 aa13.05□□□□□ -0.32
GABRE-207ENST00000476016 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
GABRE-207ENST00000476016 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
GABRE-207ENST00000476016 NUP160Q12769 1436 aa13.02□□□□□ -0.33
GABRE-207ENST00000476016 ARHGAP35Q9NRY4 1499 aa13.01□□□□□ -0.33
GABRE-207ENST00000476016 KIAA0586Q9BVV6 1533 aa13.01□□□□□ -0.33
GABRE-207ENST00000476016 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
GABRE-207ENST00000476016 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
GABRE-207ENST00000476016 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
GABRE-207ENST00000476016 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
GABRE-207ENST00000476016 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
GABRE-207ENST00000476016 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
GABRE-207ENST00000476016 IQGAP2Q13576 1575 aa12.96□□□□□ -0.33
GABRE-207ENST00000476016 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
GABRE-207ENST00000476016 CHD1O14646 1710 aa12.95□□□□□ -0.34
GABRE-207ENST00000476016 VPS8Q8N3P4 1428 aa12.95□□□□□ -0.34
GABRE-207ENST00000476016 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
GABRE-207ENST00000476016 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
GABRE-207ENST00000476016 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
GABRE-207ENST00000476016 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
GABRE-207ENST00000476016 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
GABRE-207ENST00000476016 KIAA0556O60303 1618 aa12.84□□□□□ -0.35
GABRE-207ENST00000476016 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
GABRE-207ENST00000476016 CASKIN1Q8WXD9 1431 aa12.82□□□□□ -0.36
GABRE-207ENST00000476016 FBLN2P98095 1184 aa12.82□□□□□ -0.36
GABRE-207ENST00000476016 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
GABRE-207ENST00000476016 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
GABRE-207ENST00000476016 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
GABRE-207ENST00000476016 LRRIQ1Q96JM4 1722 aa12.77□□□□□ -0.36
GABRE-207ENST00000476016 CARMIL2Q6F5E8 1435 aa12.77□□□□□ -0.37
GABRE-207ENST00000476016 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.37
GABRE-207ENST00000476016 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
GABRE-207ENST00000476016 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
GABRE-207ENST00000476016 PRG4Q92954 1404 aaPredicted RBP12.74□□□□□ -0.37
GABRE-207ENST00000476016 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
GABRE-207ENST00000476016 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
GABRE-207ENST00000476016 ABCA8O94911 1581 aa12.72□□□□□ -0.37
GABRE-207ENST00000476016 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
GABRE-207ENST00000476016 RAPGEF6Q8TEU7 1601 aa12.7□□□□□ -0.38
GABRE-207ENST00000476016 ERCC6L2Q5T890 1561 aa12.69□□□□□ -0.38
GABRE-207ENST00000476016 KANK4Q5T7N3 995 aaPredicted RBP12.69□□□□□ -0.38
GABRE-207ENST00000476016 LRRC9Q6ZRR7 1453 aa12.69□□□□□ -0.38
GABRE-207ENST00000476016 HECW1Q76N89 1606 aa12.69□□□□□ -0.38
GABRE-207ENST00000476016 NUP153P49790 1475 aaKnown RBP12.68□□□□□ -0.38
GABRE-207ENST00000476016 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
GABRE-207ENST00000476016 CCDC18Q5T9S5 1454 aa12.67□□□□□ -0.38
GABRE-207ENST00000476016 PTPRGP23470 1445 aa12.66□□□□□ -0.38
GABRE-207ENST00000476016 APLP2Q06481 763 aa12.66□□□□□ -0.38
GABRE-207ENST00000476016 PLB1Q6P1J6 1458 aa12.65□□□□□ -0.38
GABRE-207ENST00000476016 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
GABRE-207ENST00000476016 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
GABRE-207ENST00000476016 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
GABRE-207ENST00000476016 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
GABRE-207ENST00000476016 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
GABRE-207ENST00000476016 ATP10BO94823 1461 aa12.6□□□□□ -0.39
GABRE-207ENST00000476016 RRBP1Q9P2E9 1410 aaKnown RBP12.6□□□□□ -0.39
GABRE-207ENST00000476016 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
GABRE-207ENST00000476016 EHBP1L1Q8N3D4 1523 aa12.58□□□□□ -0.4
GABRE-207ENST00000476016 ABCC2Q92887 1545 aa12.58□□□□□ -0.4
GABRE-207ENST00000476016 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
GABRE-207ENST00000476016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.41e-15■■■■■ 51.1
GABRE-207ENST00000476016 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
GABRE-207ENST00000476016 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
GABRE-207ENST00000476016 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
GABRE-207ENST00000476016 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
GABRE-207ENST00000476016 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
GABRE-207ENST00000476016 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
GABRE-207ENST00000476016 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
GABRE-207ENST00000476016 MTUS2Q5JR59 1369 aa12.53□□□□□ -0.4
GABRE-207ENST00000476016 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
GABRE-207ENST00000476016 ZCCHC11Q5TAX3 1644 aaKnown RBP12.49□□□□□ -0.41
GABRE-207ENST00000476016 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
GABRE-207ENST00000476016 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
GABRE-207ENST00000476016 ABCC10Q5T3U5 1492 aa12.48□□□□□ -0.41
GABRE-207ENST00000476016 MIA2Q96PC5 1412 aa12.48□□□□□ -0.41
GABRE-207ENST00000476016 PPP6R1Q9UPN7 881 aa12.48□□□□□ -0.41
GABRE-207ENST00000476016 PLEKHD1A6NEE1 506 aa12.47□□□□□ -0.41
GABRE-207ENST00000476016 ADRA2BP18089 450 aa12.47□□□□□ -0.41
GABRE-207ENST00000476016 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.41
GABRE-207ENST00000476016 FGD6Q6ZV73 1430 aa12.46□□□□□ -0.41
GABRE-207ENST00000476016 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.41
GABRE-207ENST00000476016 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.41
GABRE-207ENST00000476016 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.41
GABRE-207ENST00000476016 KIF14Q15058 1648 aa12.45□□□□□ -0.42
GABRE-207ENST00000476016 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
GABRE-207ENST00000476016 GPATCH8Q9UKJ3 1502 aaKnown RBP12.44□□□□□ -0.42
GABRE-207ENST00000476016 CDC42BPAQ5VT25 1732 aa12.43□□□□□ -0.42
GABRE-207ENST00000476016 PIAS4Q8N2W9 510 aaPredicted RBP12.43□□□□□ -0.42
GABRE-207ENST00000476016 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
GABRE-207ENST00000476016 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
GABRE-207ENST00000476016 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
GABRE-207ENST00000476016 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.43
GABRE-207ENST00000476016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.39□□□□□ -0.437e-10■□□□□ 9.3
GABRE-207ENST00000476016 ARAP3Q8WWN8 1544 aa12.38□□□□□ -0.43
GABRE-207ENST00000476016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
GABRE-207ENST00000476016 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
GABRE-207ENST00000476016 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
GABRE-207ENST00000476016 MSH5O43196 834 aa12.37□□□□□ -0.43
GABRE-207ENST00000476016 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
GABRE-207ENST00000476016 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms