RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.09
HNRNPU-208ENST00000475997 SYNJ1O43426 1573 aa8.27□□□□□ -1.09
HNRNPU-208ENST00000475997 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
HNRNPU-208ENST00000475997 UPF2Q9HAU5 1272 aaKnown RBP8.26□□□□□ -1.09
HNRNPU-208ENST00000475997 ZNF326Q5BKZ1 582 aaKnown RBP8.25□□□□□ -1.09
HNRNPU-208ENST00000475997 RAB3GAP2Q9H2M9 1393 aa8.25□□□□□ -1.09
HNRNPU-208ENST00000475997 HNRNPUQ00839 825 aaKnown RBP eCLIP8.25□□□□□ -1.09
HNRNPU-208ENST00000475997 KIF21BO75037 1637 aa8.24□□□□□ -1.09
HNRNPU-208ENST00000475997 HSP90AA1P07900 732 aaKnown RBP8.23□□□□□ -1.09
HNRNPU-208ENST00000475997 CANXP27824 592 aaKnown RBP8.23□□□□□ -1.09
HNRNPU-208ENST00000475997 RRP7BPQ9NSQ0 103 aa8.23□□□□□ -1.09
HNRNPU-208ENST00000475997 ANP32EQ9BTT0 268 aa8.23□□□□□ -1.09
HNRNPU-208ENST00000475997 SLC4A1APQ9BWU0 796 aaKnown RBP8.23□□□□□ -1.09
HNRNPU-208ENST00000475997 NPM2Q86SE8 214 aaKnown RBP8.23□□□□□ -1.09
HNRNPU-208ENST00000475997 KCNH8Q96L42 1107 aa8.22□□□□□ -1.09
HNRNPU-208ENST00000475997 SETD5Q9C0A6 1442 aa8.22□□□□□ -1.09
HNRNPU-208ENST00000475997 TRIM44Q96DX7 344 aaPredicted RBP8.22□□□□□ -1.09
HNRNPU-208ENST00000475997 ERICH6BQ5W0A0 696 aa8.2□□□□□ -1.1
HNRNPU-208ENST00000475997 FBLN2P98095 1184 aa8.2□□□□□ -1.1
HNRNPU-208ENST00000475997 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
HNRNPU-208ENST00000475997 EIF4G1Q04637 1599 aaKnown RBP8.2□□□□□ -1.1
HNRNPU-208ENST00000475997 IRX6P78412 446 aaPredicted RBP8.2□□□□□ -1.1
HNRNPU-208ENST00000475997 FAM9BQ8IZU0 186 aa8.2□□□□□ -1.1
HNRNPU-208ENST00000475997 ZNF777Q9ULD5 760 aaPredicted RBP8.19□□□□□ -1.1
HNRNPU-208ENST00000475997 CDK11BP21127 795 aaKnown RBP8.18□□□□□ -1.1
HNRNPU-208ENST00000475997 ARAP1Q96P48 1450 aa8.18□□□□□ -1.1
HNRNPU-208ENST00000475997 NCLP19338 710 aaKnown RBP8.18□□□□□ -1.1
HNRNPU-208ENST00000475997 BICRAQ9NZM4 1560 aa8.17□□□□□ -1.1
HNRNPU-208ENST00000475997 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
HNRNPU-208ENST00000475997 TIMELESSQ9UNS1 1208 aa8.17□□□□□ -1.1
HNRNPU-208ENST00000475997 IGF1RP08069 1367 aa8.17□□□□□ -1.1
HNRNPU-208ENST00000475997 NBR1Q14596 966 aa8.16□□□□□ -1.1
HNRNPU-208ENST00000475997 NEFMP07197 916 aa8.16□□□□□ -1.1
HNRNPU-208ENST00000475997 EIF4G2P78344 907 aaKnown RBP eCLIP8.16□□□□□ -1.1
HNRNPU-208ENST00000475997 CADPSQ9ULU8 1353 aa8.16□□□□□ -1.1
HNRNPU-208ENST00000475997 PRXQ9BXM0 1461 aa8.15□□□□□ -1.1
HNRNPU-208ENST00000475997 FHOD3Q2V2M9 1422 aa8.14□□□□□ -1.11
HNRNPU-208ENST00000475997 MRS2Q9HD23 443 aa8.14□□□□□ -1.11
HNRNPU-208ENST00000475997 ARHGAP35Q9NRY4 1499 aa8.14□□□□□ -1.11
HNRNPU-208ENST00000475997 UNC13AQ9UPW8 1703 aa8.13□□□□□ -1.11
HNRNPU-208ENST00000475997 TOP2BQ02880 1626 aa8.13□□□□□ -1.11
HNRNPU-208ENST00000475997 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
HNRNPU-208ENST00000475997 TSHZ2Q9NRE2 1034 aa8.12□□□□□ -1.11
HNRNPU-208ENST00000475997 TDRD9Q8NDG6 1382 aaKnown RBP8.12□□□□□ -1.11
HNRNPU-208ENST00000475997 ERICH3Q5RHP9 1530 aa8.12□□□□□ -1.11
HNRNPU-208ENST00000475997 CCER2I3L3R5 266 aa8.12□□□□□ -1.11
HNRNPU-208ENST00000475997 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
HNRNPU-208ENST00000475997 PHLDB1Q86UU1 1377 aa8.11□□□□□ -1.11
HNRNPU-208ENST00000475997 DDRGK1Q96HY6 314 aa8.11□□□□□ -1.11
HNRNPU-208ENST00000475997 SENP3-EIF4A1A0A087X0R7 540 aa8.1□□□□□ -1.11
HNRNPU-208ENST00000475997 CUX1P39880 1505 aa8.1□□□□□ -1.11
HNRNPU-208ENST00000475997 FOXD1Q16676 465 aa8.09□□□□□ -1.11
HNRNPU-208ENST00000475997 CCDC136Q96JN2 1154 aa8.09□□□□□ -1.11
HNRNPU-208ENST00000475997 FGD5Q6ZNL6 1462 aa8.09□□□□□ -1.11
HNRNPU-208ENST00000475997 PEG3Q9GZU2 1588 aa8.09□□□□□ -1.11
HNRNPU-208ENST00000475997 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.09□□□□□ -1.12
HNRNPU-208ENST00000475997 CFTRP13569 1480 aa8.08□□□□□ -1.12
HNRNPU-208ENST00000475997 HSPA5P11021 654 aaKnown RBP8.08□□□□□ -1.12
HNRNPU-208ENST00000475997 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
HNRNPU-208ENST00000475997 KDM2AQ9Y2K7 1162 aa8.08□□□□□ -1.12
HNRNPU-208ENST00000475997 FMN1Q68DA7 1419 aa8.08□□□□□ -1.12
HNRNPU-208ENST00000475997 LRRC9Q6ZRR7 1453 aa8.07□□□□□ -1.12
HNRNPU-208ENST00000475997 GOLGA6L22H0YM25 854 aa8.07□□□□□ -1.12
HNRNPU-208ENST00000475997 BECN1Q14457 450 aa8.07□□□□□ -1.12
HNRNPU-208ENST00000475997 SALL2Q9Y467 1007 aaPredicted RBP8.07□□□□□ -1.12
HNRNPU-208ENST00000475997 TMC1Q8TDI8 760 aa8.06□□□□□ -1.12
HNRNPU-208ENST00000475997 RBM19Q9Y4C8 960 aaKnown RBP8.06□□□□□ -1.12
HNRNPU-208ENST00000475997 RAD54L2Q9Y4B4 1467 aa8.06□□□□□ -1.12
HNRNPU-208ENST00000475997 NAP1L5Q96NT1 182 aaPredicted RBP8.06□□□□□ -1.12
HNRNPU-208ENST00000475997 FANCD2Q9BXW9 1451 aa8.05□□□□□ -1.12
HNRNPU-208ENST00000475997 BCL11AQ9H165 835 aa8.05□□□□□ -1.12
HNRNPU-208ENST00000475997 ARXQ96QS3 562 aa8.05□□□□□ -1.12
HNRNPU-208ENST00000475997 MPHOSPH9Q99550 1183 aa8.04□□□□□ -1.12
HNRNPU-208ENST00000475997 CFDP1Q9UEE9 299 aaPredicted RBP8.04□□□□□ -1.12
HNRNPU-208ENST00000475997 CHMP7Q8WUX9 453 aaPredicted RBP8.04□□□□□ -1.12
HNRNPU-208ENST00000475997 L3MBTL2Q969R5 705 aa8.04□□□□□ -1.12
HNRNPU-208ENST00000475997 TSPY4P0CV99 314 aa8.03□□□□□ -1.12
HNRNPU-208ENST00000475997 TSPY10P0CW01 314 aa8.03□□□□□ -1.12
HNRNPU-208ENST00000475997 DNTTIP2Q5QJE6 756 aaKnown RBP8.02□□□□□ -1.13
HNRNPU-208ENST00000475997 B4GALNT3Q6L9W6 998 aa8.02□□□□□ -1.13
HNRNPU-208ENST00000475997 PTMAP06454 111 aaKnown RBP8.01□□□□□ -1.13
HNRNPU-208ENST00000475997 CCDC18Q5T9S5 1454 aa8.01□□□□□ -1.13
HNRNPU-208ENST00000475997 HMGXB3Q12766 1538 aa8.01□□□□□ -1.13
HNRNPU-208ENST00000475997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.01□□□□□ -1.132e-13■■□□□ 13.2
HNRNPU-208ENST00000475997 PPP4R2Q9NY27 417 aa8.01□□□□□ -1.13
HNRNPU-208ENST00000475997 FGD6Q6ZV73 1430 aa8.01□□□□□ -1.13
HNRNPU-208ENST00000475997 TIAM1Q13009 1591 aa8□□□□□ -1.13
HNRNPU-208ENST00000475997 WDR97A6NE52 1622 aa7.99□□□□□ -1.13
HNRNPU-208ENST00000475997 PLEKHD1A6NEE1 506 aa7.99□□□□□ -1.13
HNRNPU-208ENST00000475997 RGL3Q3MIN7 710 aa7.99□□□□□ -1.13
HNRNPU-208ENST00000475997 BIVM-ERCC5R4GMW8 1640 aa7.98□□□□□ -1.13
HNRNPU-208ENST00000475997 CARD11Q9BXL7 1154 aa7.98□□□□□ -1.13
HNRNPU-208ENST00000475997 CASKIN1Q8WXD9 1431 aa7.98□□□□□ -1.13
HNRNPU-208ENST00000475997 PDS5BQ9NTI5 1447 aa7.98□□□□□ -1.13
HNRNPU-208ENST00000475997 SLC24A1O60721 1099 aa7.97□□□□□ -1.13
HNRNPU-208ENST00000475997 UACAQ9BZF9 1416 aa7.97□□□□□ -1.13
HNRNPU-208ENST00000475997 PKD2Q13563 968 aa7.96□□□□□ -1.13
HNRNPU-208ENST00000475997 PRKRIP1Q9H875 184 aaPredicted RBP7.95□□□□□ -1.14
HNRNPU-208ENST00000475997 MYOM3Q5VTT5 1437 aa7.95□□□□□ -1.14
HNRNPU-208ENST00000475997 NESP48681 1621 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms