RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 KIAA0586Q9BVV6 1533 aa28.2■■■□□ 2.1
VPS8-222ENST00000475580 JPH4Q96JJ6 628 aa28.2■■■□□ 2.1
VPS8-222ENST00000475580 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
VPS8-222ENST00000475580 RAPGEF2Q9Y4G8 1499 aa28.12■■■□□ 2.09
VPS8-222ENST00000475580 IQGAP2Q13576 1575 aa28.02■■■□□ 2.08
VPS8-222ENST00000475580 PRXQ9BXM0 1461 aa28.02■■■□□ 2.08
VPS8-222ENST00000475580 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
VPS8-222ENST00000475580 CTTNBP2Q8WZ74 1663 aa27.89■■■□□ 2.06
VPS8-222ENST00000475580 UGGT2Q9NYU1 1516 aa27.88■■■□□ 2.05
VPS8-222ENST00000475580 DISP1Q96F81 1524 aa27.87■■■□□ 2.05
VPS8-222ENST00000475580 EEA1Q15075 1411 aa27.87■■■□□ 2.05
VPS8-222ENST00000475580 TRHP20396 242 aaPredicted RBP27.87■■■□□ 2.05
VPS8-222ENST00000475580 CSRNP3Q8WYN3 585 aa27.87■■■□□ 2.05
VPS8-222ENST00000475580 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
VPS8-222ENST00000475580 ADCY10Q96PN6 1610 aa27.83■■■□□ 2.05
VPS8-222ENST00000475580 TNIKQ9UKE5 1360 aa27.82■■■□□ 2.04
VPS8-222ENST00000475580 PTPRGP23470 1445 aa27.81■■■□□ 2.04
VPS8-222ENST00000475580 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
VPS8-222ENST00000475580 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
VPS8-222ENST00000475580 TTBK1Q5TCY1 1321 aaPredicted RBP27.71■■■□□ 2.03
VPS8-222ENST00000475580 MAPKBP1O60336 1514 aa27.67■■■□□ 2.02
VPS8-222ENST00000475580 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
VPS8-222ENST00000475580 KIF21BO75037 1637 aa27.65■■■□□ 2.02
VPS8-222ENST00000475580 UHRF1BP1LA0JNW5 1464 aa27.64■■■□□ 2.02
VPS8-222ENST00000475580 NPM1P06748 294 aaKnown RBP eCLIP27.63■■■□□ 2.01
VPS8-222ENST00000475580 UACAQ9BZF9 1416 aa27.63■■■□□ 2.01
VPS8-222ENST00000475580 KIF13AQ9H1H9 1805 aa27.62■■■□□ 2.01
VPS8-222ENST00000475580 ABCC2Q92887 1545 aa27.62■■■□□ 2.01
VPS8-222ENST00000475580 ABCC10Q5T3U5 1492 aa27.56■■■□□ 2
VPS8-222ENST00000475580 SAMD9Q5K651 1589 aa27.55■■■□□ 2
VPS8-222ENST00000475580 DIP2BQ9P265 1576 aa27.53■■■□□ 2
VPS8-222ENST00000475580 KDM5BQ9UGL1 1544 aa27.51■■■□□ 2
VPS8-222ENST00000475580 PLB1Q6P1J6 1458 aa27.51■■■□□ 2
VPS8-222ENST00000475580 ABCA8O94911 1581 aa27.5■■□□□ 1.99
VPS8-222ENST00000475580 ZCCHC11Q5TAX3 1644 aaKnown RBP27.46■■□□□ 1.99
VPS8-222ENST00000475580 FAM69CQ0P6D2 419 aa27.46■■□□□ 1.99
VPS8-222ENST00000475580 P3H3Q8IVL6 736 aa27.46■■□□□ 1.99
VPS8-222ENST00000475580 ASXL2Q76L83 1435 aa27.46■■□□□ 1.99
VPS8-222ENST00000475580 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
VPS8-222ENST00000475580 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
VPS8-222ENST00000475580 FHOD3Q2V2M9 1422 aa27.34■■□□□ 1.97
VPS8-222ENST00000475580 EFCAB5A4FU69 1503 aa27.34■■□□□ 1.97
VPS8-222ENST00000475580 GLI2P10070 1586 aa27.34■■□□□ 1.97
VPS8-222ENST00000475580 UBTFP17480 764 aaKnown RBP27.33■■□□□ 1.97
VPS8-222ENST00000475580 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
VPS8-222ENST00000475580 RAPGEF6Q8TEU7 1601 aa27.29■■□□□ 1.96
VPS8-222ENST00000475580 WDR7Q9Y4E6 1490 aa27.28■■□□□ 1.96
VPS8-222ENST00000475580 TSPOAP1O95153 1857 aa27.27■■□□□ 1.96
VPS8-222ENST00000475580 ATP10BO94823 1461 aa27.25■■□□□ 1.95
VPS8-222ENST00000475580 PPRC1Q5VV67 1664 aaKnown RBP27.24■■□□□ 1.95
VPS8-222ENST00000475580 MAP3K4Q9Y6R4 1608 aa27.22■■□□□ 1.95
VPS8-222ENST00000475580 ARHGAP35Q9NRY4 1499 aa27.21■■□□□ 1.95
VPS8-222ENST00000475580 NUP153P49790 1475 aaKnown RBP27.2■■□□□ 1.95
VPS8-222ENST00000475580 ARID3CA6NKF2 412 aa27.2■■□□□ 1.94
VPS8-222ENST00000475580 KDM6BO15054 1643 aa27.11■■□□□ 1.93
VPS8-222ENST00000475580 KCNH8Q96L42 1107 aa27.09■■□□□ 1.93
VPS8-222ENST00000475580 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.93
VPS8-222ENST00000475580 FMN1Q68DA7 1419 aa27.06■■□□□ 1.92
VPS8-222ENST00000475580 CD109Q6YHK3 1445 aa27.03■■□□□ 1.92
VPS8-222ENST00000475580 TEX14Q8IWB6 1497 aa27.03■■□□□ 1.92
VPS8-222ENST00000475580 MAGI3Q5TCQ9 1506 aa27.02■■□□□ 1.92
VPS8-222ENST00000475580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.01■■□□□ 1.91
VPS8-222ENST00000475580 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.91
VPS8-222ENST00000475580 ABCA9Q8IUA7 1624 aa27■■□□□ 1.91
VPS8-222ENST00000475580 CDK13Q14004 1512 aaKnown RBP27■■□□□ 1.91
VPS8-222ENST00000475580 COL17A1Q9UMD9 1497 aaPredicted RBP26.99■■□□□ 1.91
VPS8-222ENST00000475580 HECW1Q76N89 1606 aa26.98■■□□□ 1.91
VPS8-222ENST00000475580 CLIP1P30622 1438 aa26.94■■□□□ 1.9
VPS8-222ENST00000475580 PLEKHD1A6NEE1 506 aa26.92■■□□□ 1.9
VPS8-222ENST00000475580 LRRIQ1Q96JM4 1722 aa26.92■■□□□ 1.9
VPS8-222ENST00000475580 PCF11O94913 1555 aaKnown RBP26.88■■□□□ 1.89
VPS8-222ENST00000475580 ATP1B4Q9UN42 357 aaPredicted RBP26.87■■□□□ 1.89
VPS8-222ENST00000475580 CASKIN1Q8WXD9 1431 aa26.87■■□□□ 1.89
VPS8-222ENST00000475580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.85■■□□□ 1.89
VPS8-222ENST00000475580 TTC37Q6PGP7 1564 aa26.83■■□□□ 1.89
VPS8-222ENST00000475580 ARAP3Q8WWN8 1544 aa26.79■■□□□ 1.88
VPS8-222ENST00000475580 CEP162Q5TB80 1403 aa26.78■■□□□ 1.88
VPS8-222ENST00000475580 FYCO1Q9BQS8 1478 aa26.78■■□□□ 1.88
VPS8-222ENST00000475580 NEO1Q92859 1461 aa26.77■■□□□ 1.88
VPS8-222ENST00000475580 LOC105371045A0A1W2PR82 267 aa26.76■■□□□ 1.87
VPS8-222ENST00000475580 CCDC18Q5T9S5 1454 aa26.75■■□□□ 1.87
VPS8-222ENST00000475580 TROQ12816 1431 aaPredicted RBP26.74■■□□□ 1.87
VPS8-222ENST00000475580 PHLDB1Q86UU1 1377 aa26.74■■□□□ 1.87
VPS8-222ENST00000475580 CDK11AQ9UQ88 783 aaPredicted RBP26.74■■□□□ 1.87
VPS8-222ENST00000475580 KIF14Q15058 1648 aa26.74■■□□□ 1.87
VPS8-222ENST00000475580 FANCAO15360 1455 aa26.68■■□□□ 1.86
VPS8-222ENST00000475580 PLCH2O75038 1416 aa26.66■■□□□ 1.86
VPS8-222ENST00000475580 FRMPD1Q5SYB0 1578 aa26.66■■□□□ 1.86
VPS8-222ENST00000475580 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
VPS8-222ENST00000475580 AKNAQ7Z591 1439 aa26.65■■□□□ 1.86
VPS8-222ENST00000475580 MYO5CQ9NQX4 1742 aa26.64■■□□□ 1.85
VPS8-222ENST00000475580 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
VPS8-222ENST00000475580 KDM4FA0A1W2PPD8 638 aa26.6■■□□□ 1.85
VPS8-222ENST00000475580 RICTORQ6R327 1708 aa26.58■■□□□ 1.85
VPS8-222ENST00000475580 DENND4BO75064 1496 aaPredicted RBP26.57■■□□□ 1.84
VPS8-222ENST00000475580 AEBP2Q6ZN18 517 aaPredicted RBP26.57■■□□□ 1.84
VPS8-222ENST00000475580 CDC42BPBQ9Y5S2 1711 aa26.53■■□□□ 1.84
VPS8-222ENST00000475580 ADGRL1O94910 1474 aa26.53■■□□□ 1.84
VPS8-222ENST00000475580 PREX2Q70Z35 1606 aa26.51■■□□□ 1.83
VPS8-222ENST00000475580 EFCAB2Q5VUJ9 269 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms