RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 IGF1RP08069 1367 aa27.48■■□□□ 1.99
ITSN1-227ENST00000475422 CUL7Q14999 1698 aa27.46■■□□□ 1.99
ITSN1-227ENST00000475422 KIAA0586Q9BVV6 1533 aa27.41■■□□□ 1.98
ITSN1-227ENST00000475422 NPM1P06748 294 aaKnown RBP eCLIP27.38■■□□□ 1.97
ITSN1-227ENST00000475422 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
ITSN1-227ENST00000475422 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
ITSN1-227ENST00000475422 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
ITSN1-227ENST00000475422 ADCY10Q96PN6 1610 aa27.27■■□□□ 1.96
ITSN1-227ENST00000475422 FAM69CQ0P6D2 419 aa27.24■■□□□ 1.95
ITSN1-227ENST00000475422 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
ITSN1-227ENST00000475422 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
ITSN1-227ENST00000475422 ABCC10Q5T3U5 1492 aa27.21■■□□□ 1.95
ITSN1-227ENST00000475422 PTPRGP23470 1445 aa27.19■■□□□ 1.94
ITSN1-227ENST00000475422 CARMIL2Q6F5E8 1435 aa27.18■■□□□ 1.94
ITSN1-227ENST00000475422 IQGAP2Q13576 1575 aa27.17■■□□□ 1.94
ITSN1-227ENST00000475422 DIP2BQ9P265 1576 aa27.14■■□□□ 1.94
ITSN1-227ENST00000475422 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
ITSN1-227ENST00000475422 RAPGEF2Q9Y4G8 1499 aa27.08■■□□□ 1.93
ITSN1-227ENST00000475422 ABCC2Q92887 1545 aa27.01■■□□□ 1.91
ITSN1-227ENST00000475422 TSPOAP1O95153 1857 aa27.01■■□□□ 1.91
ITSN1-227ENST00000475422 DISP1Q96F81 1524 aa27■■□□□ 1.91
ITSN1-227ENST00000475422 UACAQ9BZF9 1416 aa26.97■■□□□ 1.91
ITSN1-227ENST00000475422 UGGT2Q9NYU1 1516 aa26.96■■□□□ 1.91
ITSN1-227ENST00000475422 UHRF1BP1LA0JNW5 1464 aa26.95■■□□□ 1.91
ITSN1-227ENST00000475422 KDM6BO15054 1643 aa26.94■■□□□ 1.9
ITSN1-227ENST00000475422 ASXL2Q76L83 1435 aa26.94■■□□□ 1.9
ITSN1-227ENST00000475422 PLB1Q6P1J6 1458 aa26.93■■□□□ 1.9
ITSN1-227ENST00000475422 KIAA0556O60303 1618 aa26.9■■□□□ 1.9
ITSN1-227ENST00000475422 CTTNBP2Q8WZ74 1663 aa26.87■■□□□ 1.89
ITSN1-227ENST00000475422 KDM5BQ9UGL1 1544 aa26.84■■□□□ 1.89
ITSN1-227ENST00000475422 GLI2P10070 1586 aa26.84■■□□□ 1.89
ITSN1-227ENST00000475422 ZCCHC11Q5TAX3 1644 aaKnown RBP26.8■■□□□ 1.88
ITSN1-227ENST00000475422 GOLGA3Q08378 1498 aa26.79■■□□□ 1.88
ITSN1-227ENST00000475422 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
ITSN1-227ENST00000475422 EPRSP07814 1512 aaKnown RBP26.76■■□□□ 1.87
ITSN1-227ENST00000475422 PPRC1Q5VV67 1664 aaKnown RBP26.75■■□□□ 1.87
ITSN1-227ENST00000475422 MAP3K4Q9Y6R4 1608 aa26.7■■□□□ 1.86
ITSN1-227ENST00000475422 WDR7Q9Y4E6 1490 aa26.68■■□□□ 1.86
ITSN1-227ENST00000475422 TEX14Q8IWB6 1497 aa26.67■■□□□ 1.86
ITSN1-227ENST00000475422 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
ITSN1-227ENST00000475422 KDM4FA0A1W2PPD8 638 aa26.65■■□□□ 1.86
ITSN1-227ENST00000475422 ABCA8O94911 1581 aa26.64■■□□□ 1.86
ITSN1-227ENST00000475422 CSRNP3Q8WYN3 585 aa26.62■■□□□ 1.85
ITSN1-227ENST00000475422 P3H3Q8IVL6 736 aa26.6■■□□□ 1.85
ITSN1-227ENST00000475422 KCNH8Q96L42 1107 aa26.6■■□□□ 1.85
ITSN1-227ENST00000475422 COL17A1Q9UMD9 1497 aaPredicted RBP26.57■■□□□ 1.84
ITSN1-227ENST00000475422 CD109Q6YHK3 1445 aa26.53■■□□□ 1.84
ITSN1-227ENST00000475422 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
ITSN1-227ENST00000475422 CFAP43Q8NDM7 1665 aa26.52■■□□□ 1.84
ITSN1-227ENST00000475422 EEA1Q15075 1411 aa26.48■■□□□ 1.83
ITSN1-227ENST00000475422 MAGI3Q5TCQ9 1506 aa26.48■■□□□ 1.83
ITSN1-227ENST00000475422 ADGRL1O94910 1474 aa26.46■■□□□ 1.83
ITSN1-227ENST00000475422 SAMD9Q5K651 1589 aa26.46■■□□□ 1.83
ITSN1-227ENST00000475422 RANGAP1P46060 587 aaPredicted RBP26.44■■□□□ 1.82
ITSN1-227ENST00000475422 ATP10BO94823 1461 aa26.43■■□□□ 1.82
ITSN1-227ENST00000475422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.39■■□□□ 1.82
ITSN1-227ENST00000475422 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.82
ITSN1-227ENST00000475422 RAPGEF6Q8TEU7 1601 aa26.39■■□□□ 1.81
ITSN1-227ENST00000475422 FHOD3Q2V2M9 1422 aa26.31■■□□□ 1.8
ITSN1-227ENST00000475422 ABCA9Q8IUA7 1624 aa26.3■■□□□ 1.8
ITSN1-227ENST00000475422 NUP153P49790 1475 aaKnown RBP26.27■■□□□ 1.8
ITSN1-227ENST00000475422 ARAP3Q8WWN8 1544 aa26.27■■□□□ 1.8
ITSN1-227ENST00000475422 KIF21BO75037 1637 aa26.26■■□□□ 1.79
ITSN1-227ENST00000475422 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
ITSN1-227ENST00000475422 EFCAB5A4FU69 1503 aa26.22■■□□□ 1.79
ITSN1-227ENST00000475422 PLEKHD1A6NEE1 506 aa26.2■■□□□ 1.78
ITSN1-227ENST00000475422 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
ITSN1-227ENST00000475422 NEO1Q92859 1461 aa26.18■■□□□ 1.78
ITSN1-227ENST00000475422 UBTFP17480 764 aaKnown RBP26.16■■□□□ 1.78
ITSN1-227ENST00000475422 RAPGEF3O95398 923 aa26.15■■□□□ 1.78
ITSN1-227ENST00000475422 HECW2Q9P2P5 1572 aa26.09■■□□□ 1.77
ITSN1-227ENST00000475422 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
ITSN1-227ENST00000475422 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
ITSN1-227ENST00000475422 CDK13Q14004 1512 aaKnown RBP26.04■■□□□ 1.76
ITSN1-227ENST00000475422 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.76
ITSN1-227ENST00000475422 FRMPD1Q5SYB0 1578 aa26.03■■□□□ 1.76
ITSN1-227ENST00000475422 CFAP74Q9C0B2 1584 aa26.03■■□□□ 1.76
ITSN1-227ENST00000475422 ARID4BQ4LE39 1312 aaPredicted RBP26.02■■□□□ 1.76
ITSN1-227ENST00000475422 AKNAQ7Z591 1439 aa26.02■■□□□ 1.76
ITSN1-227ENST00000475422 FANCAO15360 1455 aa26.02■■□□□ 1.76
ITSN1-227ENST00000475422 DENND4BO75064 1496 aaPredicted RBP26.01■■□□□ 1.75
ITSN1-227ENST00000475422 TTC37Q6PGP7 1564 aa26■■□□□ 1.75
ITSN1-227ENST00000475422 FMN1Q68DA7 1419 aa26■■□□□ 1.75
ITSN1-227ENST00000475422 ARHGAP35Q9NRY4 1499 aa25.97■■□□□ 1.75
ITSN1-227ENST00000475422 HECW1Q76N89 1606 aa25.96■■□□□ 1.75
ITSN1-227ENST00000475422 RICTORQ6R327 1708 aa25.96■■□□□ 1.75
ITSN1-227ENST00000475422 ADAMTSL3P82987 1691 aa25.96■■□□□ 1.75
ITSN1-227ENST00000475422 CDK11AQ9UQ88 783 aaPredicted RBP25.93■■□□□ 1.74
ITSN1-227ENST00000475422 PTPRMP28827 1452 aa25.92■■□□□ 1.74
ITSN1-227ENST00000475422 BCORL1Q5H9F3 1711 aa25.92■■□□□ 1.74
ITSN1-227ENST00000475422 ARHGEF40Q8TER5 1519 aa25.92■■□□□ 1.74
ITSN1-227ENST00000475422 PLCH2O75038 1416 aa25.88■■□□□ 1.73
ITSN1-227ENST00000475422 ILDR1Q86SU0 546 aaPredicted RBP25.88■■□□□ 1.73
ITSN1-227ENST00000475422 MADDQ8WXG6 1647 aa25.87■■□□□ 1.73
ITSN1-227ENST00000475422 ZMYM4Q5VZL5 1548 aa25.85■■□□□ 1.73
ITSN1-227ENST00000475422 ZFYVE16Q7Z3T8 1539 aa25.84■■□□□ 1.73
ITSN1-227ENST00000475422 SCAPERQ9BY12 1400 aa25.84■■□□□ 1.73
ITSN1-227ENST00000475422 MYO5CQ9NQX4 1742 aa25.83■■□□□ 1.73
ITSN1-227ENST00000475422 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
ITSN1-227ENST00000475422 MAGI2Q86UL8 1455 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms