RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 ERCC6L2Q5T890 1561 aa24.14■■□□□ 1.45
DNMT3A-211ENST00000474887 KIAA0586Q9BVV6 1533 aa24.13■■□□□ 1.45
DNMT3A-211ENST00000474887 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
DNMT3A-211ENST00000474887 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
DNMT3A-211ENST00000474887 NPM1P06748 294 aaKnown RBP eCLIP23.99■■□□□ 1.43
DNMT3A-211ENST00000474887 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
DNMT3A-211ENST00000474887 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
DNMT3A-211ENST00000474887 PTPRGP23470 1445 aa23.88■■□□□ 1.41
DNMT3A-211ENST00000474887 TNIKQ9UKE5 1360 aa23.86■■□□□ 1.41
DNMT3A-211ENST00000474887 IQGAP2Q13576 1575 aa23.84■■□□□ 1.41
DNMT3A-211ENST00000474887 MAPKBP1O60336 1514 aa23.81■■□□□ 1.4
DNMT3A-211ENST00000474887 ABCC10Q5T3U5 1492 aa23.77■■□□□ 1.4
DNMT3A-211ENST00000474887 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
DNMT3A-211ENST00000474887 FAM69CQ0P6D2 419 aa23.76■■□□□ 1.39
DNMT3A-211ENST00000474887 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
DNMT3A-211ENST00000474887 DISP1Q96F81 1524 aa23.71■■□□□ 1.39
DNMT3A-211ENST00000474887 UHRF1BP1LA0JNW5 1464 aa23.71■■□□□ 1.39
DNMT3A-211ENST00000474887 PRXQ9BXM0 1461 aa23.7■■□□□ 1.38
DNMT3A-211ENST00000474887 ABCC2Q92887 1545 aa23.69■■□□□ 1.38
DNMT3A-211ENST00000474887 UACAQ9BZF9 1416 aa23.68■■□□□ 1.38
DNMT3A-211ENST00000474887 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
DNMT3A-211ENST00000474887 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
DNMT3A-211ENST00000474887 GOLGA3Q08378 1498 aa23.65■■□□□ 1.38
DNMT3A-211ENST00000474887 CSRNP3Q8WYN3 585 aa23.64■■□□□ 1.37
DNMT3A-211ENST00000474887 PLB1Q6P1J6 1458 aa23.63■■□□□ 1.37
DNMT3A-211ENST00000474887 EEA1Q15075 1411 aa23.62■■□□□ 1.37
DNMT3A-211ENST00000474887 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
DNMT3A-211ENST00000474887 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
DNMT3A-211ENST00000474887 KIAA0556O60303 1618 aa23.59■■□□□ 1.37
DNMT3A-211ENST00000474887 KDM5BQ9UGL1 1544 aa23.56■■□□□ 1.36
DNMT3A-211ENST00000474887 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
DNMT3A-211ENST00000474887 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
DNMT3A-211ENST00000474887 GLI2P10070 1586 aa23.5■■□□□ 1.35
DNMT3A-211ENST00000474887 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
DNMT3A-211ENST00000474887 EPRSP07814 1512 aaKnown RBP23.42■■□□□ 1.34
DNMT3A-211ENST00000474887 ABCA8O94911 1581 aa23.4■■□□□ 1.34
DNMT3A-211ENST00000474887 ZCCHC11Q5TAX3 1644 aaKnown RBP23.38■■□□□ 1.33
DNMT3A-211ENST00000474887 KDM6BO15054 1643 aa23.37■■□□□ 1.33
DNMT3A-211ENST00000474887 WDR7Q9Y4E6 1490 aa23.37■■□□□ 1.33
DNMT3A-211ENST00000474887 TEX14Q8IWB6 1497 aa23.35■■□□□ 1.33
DNMT3A-211ENST00000474887 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
DNMT3A-211ENST00000474887 P3H3Q8IVL6 736 aa23.31■■□□□ 1.32
DNMT3A-211ENST00000474887 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
DNMT3A-211ENST00000474887 SAMD9Q5K651 1589 aa23.29■■□□□ 1.32
DNMT3A-211ENST00000474887 MAP3K4Q9Y6R4 1608 aa23.29■■□□□ 1.32
DNMT3A-211ENST00000474887 KIF21BO75037 1637 aa23.26■■□□□ 1.31
DNMT3A-211ENST00000474887 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
DNMT3A-211ENST00000474887 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
DNMT3A-211ENST00000474887 CD109Q6YHK3 1445 aa23.24■■□□□ 1.31
DNMT3A-211ENST00000474887 ATP10BO94823 1461 aa23.24■■□□□ 1.31
DNMT3A-211ENST00000474887 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
DNMT3A-211ENST00000474887 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
DNMT3A-211ENST00000474887 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
DNMT3A-211ENST00000474887 PHLDB1Q86UU1 1377 aa23.17■■□□□ 1.3
DNMT3A-211ENST00000474887 RAPGEF6Q8TEU7 1601 aa23.15■■□□□ 1.3
DNMT3A-211ENST00000474887 UBTFP17480 764 aaKnown RBP23.15■■□□□ 1.3
DNMT3A-211ENST00000474887 COL17A1Q9UMD9 1497 aaPredicted RBP23.15■■□□□ 1.3
DNMT3A-211ENST00000474887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
DNMT3A-211ENST00000474887 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
DNMT3A-211ENST00000474887 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
DNMT3A-211ENST00000474887 FHOD3Q2V2M9 1422 aa23.12■■□□□ 1.29
DNMT3A-211ENST00000474887 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
DNMT3A-211ENST00000474887 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
DNMT3A-211ENST00000474887 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
DNMT3A-211ENST00000474887 NUP153P49790 1475 aaKnown RBP23.1■■□□□ 1.29
DNMT3A-211ENST00000474887 ARAP3Q8WWN8 1544 aa23.05■■□□□ 1.28
DNMT3A-211ENST00000474887 ABCA9Q8IUA7 1624 aa23.04■■□□□ 1.28
DNMT3A-211ENST00000474887 FMN1Q68DA7 1419 aa23.03■■□□□ 1.28
DNMT3A-211ENST00000474887 NEO1Q92859 1461 aa23.01■■□□□ 1.27
DNMT3A-211ENST00000474887 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
DNMT3A-211ENST00000474887 ARHGAP35Q9NRY4 1499 aa22.93■■□□□ 1.26
DNMT3A-211ENST00000474887 ADGRL1O94910 1474 aa22.92■■□□□ 1.26
DNMT3A-211ENST00000474887 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
DNMT3A-211ENST00000474887 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
DNMT3A-211ENST00000474887 RAPGEF3O95398 923 aa22.85■■□□□ 1.25
DNMT3A-211ENST00000474887 HECW1Q76N89 1606 aa22.85■■□□□ 1.25
DNMT3A-211ENST00000474887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.83■■□□□ 1.25
DNMT3A-211ENST00000474887 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
DNMT3A-211ENST00000474887 FANCAO15360 1455 aa22.82■■□□□ 1.24
DNMT3A-211ENST00000474887 CFAP74Q9C0B2 1584 aa22.81■■□□□ 1.24
DNMT3A-211ENST00000474887 DENND4BO75064 1496 aaPredicted RBP22.81■■□□□ 1.24
DNMT3A-211ENST00000474887 CDK13Q14004 1512 aaKnown RBP22.81■■□□□ 1.24
DNMT3A-211ENST00000474887 PLCH2O75038 1416 aa22.8■■□□□ 1.24
DNMT3A-211ENST00000474887 EFCAB2Q5VUJ9 269 aa22.78■■□□□ 1.24
DNMT3A-211ENST00000474887 CLIP1P30622 1438 aa22.76■■□□□ 1.23
DNMT3A-211ENST00000474887 TROQ12816 1431 aaPredicted RBP22.76■■□□□ 1.23
DNMT3A-211ENST00000474887 CASKIN1Q8WXD9 1431 aa22.76■■□□□ 1.23
DNMT3A-211ENST00000474887 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
DNMT3A-211ENST00000474887 MAGI2Q86UL8 1455 aa22.73■■□□□ 1.23
DNMT3A-211ENST00000474887 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
DNMT3A-211ENST00000474887 FRMPD1Q5SYB0 1578 aa22.69■■□□□ 1.22
DNMT3A-211ENST00000474887 SCAPERQ9BY12 1400 aa22.67■■□□□ 1.22
DNMT3A-211ENST00000474887 ARID4BQ4LE39 1312 aaPredicted RBP22.67■■□□□ 1.22
DNMT3A-211ENST00000474887 KIF14Q15058 1648 aa22.67■■□□□ 1.22
DNMT3A-211ENST00000474887 ZMYM4Q5VZL5 1548 aa22.67■■□□□ 1.22
DNMT3A-211ENST00000474887 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
DNMT3A-211ENST00000474887 RICTORQ6R327 1708 aa22.65■■□□□ 1.22
DNMT3A-211ENST00000474887 POGZQ7Z3K3 1410 aa22.64■■□□□ 1.21
DNMT3A-211ENST00000474887 ARHGEF40Q8TER5 1519 aa22.62■■□□□ 1.21
DNMT3A-211ENST00000474887 MYO5CQ9NQX4 1742 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms